This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 1
GLN 2
0.1796
GLN 2
ILE 3
0.0689
ILE 3
THR 4
-0.0756
THR 4
LEU 5
-0.0683
LEU 5
TRP 6
0.0106
TRP 6
GLN 7
-0.0007
GLN 7
ARG 8
-0.0147
ARG 8
PRO 9
-0.0201
PRO 9
LEU 10
0.0720
LEU 10
VAL 11
-0.0287
VAL 11
THR 12
0.0522
THR 12
ILE 13
-0.0029
ILE 13
LYS 14
0.0096
LYS 14
ILE 15
0.0160
ILE 15
GLY 16
0.0080
GLY 16
GLY 17
0.0156
GLY 17
GLN 18
-0.0049
GLN 18
LEU 19
0.0344
LEU 19
LYS 20
-0.0058
LYS 20
GLU 21
0.0482
GLU 21
ALA 22
-0.0156
ALA 22
LEU 23
-0.0132
LEU 23
LEU 24
0.0214
LEU 24
ASP 25
-0.0033
ASP 25
THR 26
-0.0113
THR 26
GLY 27
-0.0407
GLY 27
ALA 28
-0.0339
ALA 28
ASP 29
0.0093
ASP 29
ASP 30
-0.0286
ASP 30
THR 31
0.0053
THR 31
VAL 32
0.0017
VAL 32
LEU 33
-0.0137
LEU 33
GLU 34
-0.0029
GLU 34
GLU 35
0.0073
GLU 35
MET 36
-0.0105
MET 36
SER 37
0.0020
SER 37
LEU 38
-0.0184
LEU 38
PRO 39
-0.0002
PRO 39
GLY 40
0.0208
GLY 40
ARG 41
0.0215
ARG 41
TRP 42
0.0025
TRP 42
LYS 43
0.0045
LYS 43
PRO 44
0.0074
PRO 44
LYS 45
-0.0133
LYS 45
MET 46
0.0208
MET 46
ILE 47
-0.0141
ILE 47
GLY 48
0.0178
GLY 48
GLY 49
0.0086
GLY 49
ILE 50
0.0253
ILE 50
GLY 51
-0.0088
GLY 51
GLY 52
0.0055
GLY 52
PHE 53
0.0049
PHE 53
ILE 54
-0.0004
ILE 54
LYS 55
-0.0084
LYS 55
VAL 56
0.0001
VAL 56
ARG 57
0.0043
ARG 57
GLN 58
0.0075
GLN 58
TYR 59
0.0131
TYR 59
ASP 60
-0.0006
ASP 60
GLN 61
0.0111
GLN 61
ILE 62
-0.0012
ILE 62
LEU 63
0.0226
LEU 63
ILE 64
0.0091
ILE 64
GLU 65
0.0172
GLU 65
ILE 66
0.0018
ILE 66
CYS 67
0.0561
CYS 67
GLY 68
0.0085
GLY 68
HIS 69
-0.0016
HIS 69
LYS 70
-0.0043
LYS 70
ALA 71
0.0024
ALA 71
ILE 72
-0.0010
ILE 72
GLY 73
0.0068
GLY 73
THR 74
0.0073
THR 74
VAL 75
0.0050
VAL 75
LEU 76
0.0078
LEU 76
VAL 77
-0.0118
VAL 77
GLY 78
-0.0012
GLY 78
PRO 79
-0.0039
PRO 79
THR 80
0.0078
THR 80
PRO 81
0.0122
PRO 81
VAL 82
0.0082
VAL 82
ASN 83
-0.0050
ASN 83
ILE 84
-0.0044
ILE 84
ILE 85
0.0084
ILE 85
GLY 86
0.0091
GLY 86
ARG 87
0.0029
ARG 87
ASN 88
-0.0250
ASN 88
LEU 89
0.0149
LEU 89
LEU 90
-0.0390
LEU 90
THR 91
0.0301
THR 91
GLN 92
-0.0354
GLN 92
ILE 93
0.0069
ILE 93
GLY 94
-0.0730
GLY 94
CYS 95
0.0214
CYS 95
THR 96
-0.0164
THR 96
LEU 97
-0.1109
LEU 97
ASN 98
0.0320
ASN 98
PHE 99
-0.0027
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.