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CA strain for EXAMPLE1

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 0.0609
GLN 2ILE 3 0.0120
ILE 3THR 4 -0.0441
THR 4LEU 5 -0.0155
LEU 5TRP 6 0.0418
TRP 6GLN 7 0.0438
GLN 7ARG 8 0.0023
ARG 8PRO 9 -0.0320
PRO 9LEU 10 -0.0091
LEU 10VAL 11 0.0114
VAL 11THR 12 -0.0125
THR 12ILE 13 0.0036
ILE 13LYS 14 0.0006
LYS 14ILE 15 -0.0083
ILE 15GLY 16 -0.0040
GLY 16GLY 17 -0.0039
GLY 17GLN 18 -0.0001
GLN 18LEU 19 -0.0117
LEU 19LYS 20 0.0028
LYS 20GLU 21 -0.0013
GLU 21ALA 22 0.0000
ALA 22LEU 23 0.0040
LEU 23LEU 24 -0.0350
LEU 24ASP 25 0.0846
ASP 25THR 26 -0.0990
THR 26GLY 27 -0.0672
GLY 27ALA 28 -0.1113
ALA 28ASP 29 0.0399
ASP 29ASP 30 -0.0375
ASP 30THR 31 -0.0059
THR 31VAL 32 0.0227
VAL 32LEU 33 0.0005
LEU 33GLU 34 0.0030
GLU 34GLU 35 -0.0069
GLU 35MET 36 0.0049
MET 36SER 37 -0.0064
SER 37LEU 38 0.0112
LEU 38PRO 39 -0.0036
PRO 39GLY 40 -0.0103
GLY 40ARG 41 -0.0089
ARG 41TRP 42 -0.0043
TRP 42LYS 43 0.0000
LYS 43PRO 44 -0.0117
PRO 44LYS 45 0.0005
LYS 45MET 46 -0.0084
MET 46ILE 47 0.0115
ILE 47GLY 48 0.0818
GLY 48GLY 49 0.0462
GLY 49ILE 50 0.0690
ILE 50GLY 51 -0.0296
GLY 51GLY 52 -0.0111
GLY 52PHE 53 -0.0564
PHE 53ILE 54 0.0392
ILE 54LYS 55 -0.0558
LYS 55VAL 56 -0.0023
VAL 56ARG 57 -0.0022
ARG 57GLN 58 0.0023
GLN 58TYR 59 0.0031
TYR 59ASP 60 0.0050
ASP 60GLN 61 0.0034
GLN 61ILE 62 -0.0007
ILE 62LEU 63 -0.0128
LEU 63ILE 64 -0.0121
ILE 64GLU 65 -0.0113
GLU 65ILE 66 0.0023
ILE 66CYS 67 -0.0083
CYS 67GLY 68 0.0030
GLY 68HIS 69 0.0062
HIS 69LYS 70 -0.0208
LYS 70ALA 71 -0.0041
ALA 71ILE 72 0.0029
ILE 72GLY 73 -0.0163
GLY 73THR 74 0.0066
THR 74VAL 75 0.0098
VAL 75LEU 76 0.0201
LEU 76VAL 77 -0.0044
VAL 77GLY 78 0.0081
GLY 78PRO 79 -0.0009
PRO 79THR 80 -0.0080
THR 80PRO 81 -0.0029
PRO 81VAL 82 0.0026
VAL 82ASN 83 0.0049
ASN 83ILE 84 -0.0143
ILE 84ILE 85 -0.0100
ILE 85GLY 86 0.0082
GLY 86ARG 87 -0.0014
ARG 87ASN 88 -0.0194
ASN 88LEU 89 -0.0184
LEU 89LEU 90 0.0565
LEU 90THR 91 -0.0975
THR 91GLN 92 0.0604
GLN 92ILE 93 -0.0275
ILE 93GLY 94 0.0851
GLY 94CYS 95 -0.1305
CYS 95THR 96 -0.0553
THR 96LEU 97 -0.0407
LEU 97ASN 98 -0.1146
ASN 98PHE 99 0.0352

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.