This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLY 325
GLU 326
-0.2858
GLU 326
SER 327
-0.2127
SER 327
PHE 328
-0.1725
PHE 328
THR 329
-0.1521
THR 329
LEU 330
-0.1053
LEU 330
GLN 331
0.0367
GLN 331
ILE 332
-0.1566
ILE 332
ARG 333
0.0393
ARG 333
GLY 334
-0.0118
GLY 334
ARG 335
-0.2407
ARG 335
GLU 336
-0.7547
GLU 336
ARG 337
-0.0585
ARG 337
PHE 338
-0.4459
PHE 338
GLU 339
-0.7978
GLU 339
MET 340
-0.4027
MET 340
PHE 341
-0.3005
PHE 341
ARG 342
-0.0943
ARG 342
GLU 343
-0.1561
GLU 343
LEU 344
-0.2560
LEU 344
ASN 345
-0.5485
ASN 345
GLU 346
-0.2158
GLU 346
ALA 347
0.0032
ALA 347
LEU 348
-0.2628
LEU 348
GLU 349
-0.3453
GLU 349
LEU 350
-0.2871
LEU 350
LYS 351
-0.1320
LYS 351
ASP 352
-0.0734
ASP 352
ALA 353
0.9554
ALA 353
GLN 354
-0.1230
GLN 354
ALA 355
0.0697
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.