This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLY 325
GLU 326
0.0550
GLU 326
SER 327
-0.0886
SER 327
PHE 328
-0.0573
PHE 328
THR 329
0.1090
THR 329
LEU 330
-0.4888
LEU 330
GLN 331
-0.0778
GLN 331
ILE 332
0.0612
ILE 332
ARG 333
0.0123
ARG 333
GLY 334
0.0232
GLY 334
ARG 335
0.0018
ARG 335
GLU 336
0.0339
GLU 336
ARG 337
0.0183
ARG 337
PHE 338
0.0971
PHE 338
GLU 339
0.6206
GLU 339
MET 340
0.1288
MET 340
PHE 341
0.0450
PHE 341
ARG 342
0.1295
ARG 342
GLU 343
0.0379
GLU 343
LEU 344
-0.0024
LEU 344
ASN 345
0.0042
ASN 345
GLU 346
0.0177
GLU 346
ALA 347
-0.0027
ALA 347
LEU 348
-0.0045
LEU 348
GLU 349
-0.0046
GLU 349
LEU 350
-0.0262
LEU 350
LYS 351
-0.0252
LYS 351
ASP 352
-0.1210
ASP 352
ALA 353
-1.5852
ALA 353
GLN 354
-0.0904
GLN 354
ALA 355
-0.0292
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.