This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLY 325
GLU 326
0.0097
GLU 326
SER 327
-0.1131
SER 327
PHE 328
0.0895
PHE 328
THR 329
-0.0258
THR 329
LEU 330
0.0085
LEU 330
GLN 331
-0.0307
GLN 331
ILE 332
-0.0241
ILE 332
ARG 333
-0.0106
ARG 333
GLY 334
-0.0417
GLY 334
ARG 335
-0.0352
ARG 335
GLU 336
0.0325
GLU 336
ARG 337
-0.0113
ARG 337
PHE 338
-0.0334
PHE 338
GLU 339
0.1010
GLU 339
MET 340
0.0548
MET 340
PHE 341
-0.0160
PHE 341
ARG 342
-0.0239
ARG 342
GLU 343
0.0096
GLU 343
LEU 344
-0.0340
LEU 344
ASN 345
-0.0063
ASN 345
GLU 346
0.0093
GLU 346
ALA 347
-0.3016
ALA 347
LEU 348
-0.2115
LEU 348
GLU 349
0.3149
GLU 349
LEU 350
-0.1881
LEU 350
LYS 351
-1.4984
LYS 351
ASP 352
-0.0162
ASP 352
ALA 353
0.1780
ALA 353
GLN 354
-0.2147
GLN 354
ALA 355
-0.0163
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.