Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 9 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0001

ASN 2 TYR 3 -0.0077

TYR 3 GLU 4 -0.0000

GLU 4 ASP 5 -0.0069

ASP 5 VAL 6 0.0001

VAL 6 ILE 7 -0.0073

ILE 7 ASP 8 0.0002

ASP 8 LYS 9 -0.0040

LYS 9 TYR 10 0.0002

TYR 10 LYS 11 0.0028

LYS 11 PRO 12 -0.0001

PRO 12 LYS 13 0.0597

LYS 13 ASP 14 -0.0002

ASP 14 ALA 15 -0.0086

ALA 15 THR 16 0.0003

THR 16 PHE 17 0.0028

PHE 17 ASP 18 -0.0002

ASP 18 HSP 19 -0.0866

HSP 19 ALA 20 -0.0003

ALA 20 SER 21 0.1000

SER 21 TYR 22 0.0000

TYR 22 ASP 23 -0.0394

ASP 23 TRP 24 0.0000

TRP 24 ARG 25 0.0165

ARG 25 LEU 26 -0.0002

LEU 26 HSP 27 -0.0285

HSP 27 LYS 28 -0.0001

LYS 28 GLY 29 0.0304

GLY 29 VAL 30 0.0002

VAL 30 THR 31 0.0036

THR 31 PRO 32 0.0001

PRO 32 VAL 33 -0.0259

VAL 33 LYS 34 0.0001

LYS 34 ASP 35 -0.0078

ASP 35 GLN 36 -0.0001

GLN 36 ALA 37 -0.0026

ALA 37 ASN 38 0.0001

ASN 38 CYS 39 -0.0052

CYS 39 GLY 40 0.0004

GLY 40 SER 41 0.0018

SER 41 CYM 42 0.0001

CYM 42 TRP 43 -0.0002

TRP 43 ALA 44 -0.0001

ALA 44 PHE 45 0.0004

PHE 45 SER 46 0.0001

SER 46 THR 47 0.0024

THR 47 VAL 48 0.0002

VAL 48 GLY 49 -0.0002

GLY 49 VAL 50 -0.0001

VAL 50 VAL 51 -0.0065

VAL 51 GLU 52 0.0004

GLU 52 SER 53 -0.0022

SER 53 GLN 54 -0.0001

GLN 54 TYR 55 -0.0153

TYR 55 ALA 56 -0.0002

ALA 56 ILE 57 -0.0025

ILE 57 ARG 58 -0.0004

ARG 58 LYS 59 -0.0202

LYS 59 ASN 60 -0.0001

ASN 60 GLN 61 -0.0056

GLN 61 LEU 62 0.0004

LEU 62 VAL 63 0.0284

VAL 63 SER 64 -0.0000

SER 64 ILE 65 0.0020

ILE 65 SER 66 -0.0001

SER 66 GLU 67 0.0028

GLU 67 GLN 68 -0.0002

GLN 68 GLN 69 0.0060

GLN 69 MET 70 0.0000

MET 70 VAL 71 0.0009

VAL 71 ASP 72 -0.0001

ASP 72 CYS 73 -0.0088

CYS 73 SER 74 -0.0004

SER 74 THR 75 0.0010

THR 75 GLN 76 0.0001

GLN 76 ASN 77 0.0002

ASN 77 THR 78 -0.0001

THR 78 GLY 79 -0.0009

GLY 79 CYS 80 0.0002

CYS 80 TYR 81 0.0021

TYR 81 GLY 82 0.0003

GLY 82 GLY 83 -0.0016

GLY 83 PHE 84 0.0002

PHE 84 ILE 85 -0.0038

ILE 85 PRO 86 -0.0003

PRO 86 LEU 87 -0.0052

LEU 87 ALA 88 -0.0004

ALA 88 PHE 89 -0.0031

PHE 89 GLU 90 0.0003

GLU 90 ASP 91 -0.0072

ASP 91 MET 92 -0.0001

MET 92 ILE 93 0.0021

ILE 93 GLU 94 -0.0001

GLU 94 MET 95 -0.0039

MET 95 GLY 96 0.0002

GLY 96 GLY 97 0.0011

GLY 97 LEU 98 -0.0001

LEU 98 CYS 99 0.0015

CYS 99 SER 100 -0.0003

SER 100 SER 101 0.0001

SER 101 GLU 102 0.0002

GLU 102 ASP 103 0.0021

ASP 103 TYR 104 -0.0005

TYR 104 PRO 105 -0.0018

PRO 105 TYR 106 -0.0002

TYR 106 VAL 107 0.0072

VAL 107 ALA 108 0.0001

ALA 108 ASP 109 -0.0062

ASP 109 ILE 110 0.0002

ILE 110 PRO 111 -0.0040

PRO 111 GLU 112 0.0001

GLU 112 MET 113 -0.0068

MET 113 CYS 114 -0.0002

CYS 114 LYS 115 0.0058

LYS 115 PHE 116 -0.0001

PHE 116 ASP 117 0.0011

ASP 117 ILE 118 0.0003

ILE 118 CYS 119 -0.0028

CYS 119 GLU 120 0.0001

GLU 120 GLN 121 -0.0072

GLN 121 LYS 122 0.0000

LYS 122 TYR 123 -0.0148

TYR 123 LYS 124 -0.0003

LYS 124 ILE 125 -0.0077

ILE 125 ASN 126 -0.0001

ASN 126 ASN 127 0.0001

ASN 127 PHE 128 0.0002

PHE 128 LEU 129 -0.0083

LEU 129 GLU 130 -0.0001

GLU 130 ILE 131 -0.0072

ILE 131 PRO 132 0.0003

PRO 132 GLU 133 -0.0040

GLU 133 ASP 134 -0.0003

ASP 134 LYS 135 0.0024

LYS 135 PHE 136 0.0003

PHE 136 LYS 137 -0.0150

LYS 137 GLU 138 -0.0001

GLU 138 ALA 139 -0.0242

ALA 139 ILE 140 0.0001

ILE 140 ARG 141 0.0190

ARG 141 PHE 142 0.0000

PHE 142 LEU 143 -0.0025

LEU 143 GLY 144 0.0001

GLY 144 PRO 145 0.0109

PRO 145 LEU 146 0.0002

LEU 146 SER 147 -0.0022

SER 147 VAL 148 0.0003

VAL 148 SER 149 -0.0006

SER 149 ILE 150 0.0002

ILE 150 ALA 151 -0.0017

ALA 151 VAL 152 0.0001

VAL 152 SER 153 -0.0033

SER 153 ASP 154 -0.0003

ASP 154 ASP 155 0.0046

ASP 155 PHE 156 0.0004

PHE 156 ALA 157 0.0047

ALA 157 PHE 158 0.0001

PHE 158 TYR 159 0.0112

TYR 159 ARG 160 -0.0002

ARG 160 GLY 161 0.0226

GLY 161 GLY 162 0.0002

GLY 162 ILE 163 0.0325

ILE 163 PHE 164 0.0005

PHE 164 ASP 165 -0.0086

ASP 165 GLY 166 -0.0000

GLY 166 GLU 167 0.0083

GLU 167 CYS 168 0.0002

CYS 168 GLY 169 -0.0010

GLY 169 GLU 170 0.0000

GLU 170 ALA 171 0.0016

ALA 171 PRO 172 -0.0001

PRO 172 ASN 173 -0.0003

ASN 173 HSP 174 -0.0001

HSP 174 ALA 175 -0.0006

ALA 175 VAL 176 0.0005

VAL 176 ILE 177 -0.0023

ILE 177 LEU 178 0.0003

LEU 178 VAL 179 -0.0039

VAL 179 GLY 180 0.0002

GLY 180 PHE 181 -0.0667

PHE 181 GLY 182 0.0002

GLY 182 ALA 183 -0.0848

ALA 183 GLU 184 -0.0003

GLU 184 ASP 185 0.0459

ASP 185 ALA 186 -0.0003

ALA 186 TYR 187 0.1599

TYR 187 ASP 188 0.0001

ASP 188 PHE 189 0.0040

PHE 189 ASP 190 0.0000

ASP 190 THR 191 -0.0036

THR 191 LYS 192 0.0003

LYS 192 THR 193 -0.0475

THR 193 MET 194 0.0001

MET 194 LYS 195 -0.1181

LYS 195 LYS 196 0.0001

LYS 196 ARG 197 0.1361

ARG 197 TYR 198 -0.0000

TYR 198 TYR 199 -0.0362

TYR 199 TYR 200 0.0002

TYR 200 ILE 201 0.0013

ILE 201 VAL 202 -0.0000

VAL 202 LYS 203 0.0065

LYS 203 ASN 204 -0.0003

ASN 204 SER 205 0.0066

SER 205 TRP 206 -0.0000

TRP 206 GLY 207 -0.0056

GLY 207 VAL 208 -0.0000

VAL 208 SER 209 0.0105

SER 209 TRP 210 0.0001

TRP 210 GLY 211 0.0181

GLY 211 GLU 212 0.0001

GLU 212 LYS 213 0.0035

LYS 213 GLY 214 0.0001

GLY 214 PHE 215 0.0105

PHE 215 ILE 216 -0.0002

ILE 216 ARG 217 0.0326

ARG 217 LEU 218 0.0001

LEU 218 GLU 219 0.0736

GLU 219 THR 220 -0.0000

THR 220 ASP 221 -0.0223

ASP 221 ILE 222 0.0002

ILE 222 ASN 223 -0.0117

ASN 223 GLY 224 0.0002

GLY 224 TYR 225 0.0048

TYR 225 ARG 226 0.0000

ARG 226 LYS 227 -0.0063

LYS 227 PRO 228 -0.0001

PRO 228 CYS 229 0.0256

CYS 229 SER 230 -0.0001

SER 230 LEU 231 0.0047

LEU 231 GLY 232 0.0002

GLY 232 THR 233 -0.0022

THR 233 GLU 234 -0.0001

GLU 234 ALA 235 0.0004

ALA 235 LEU 236 0.0003

LEU 236 VAL 237 -0.0007

VAL 237 ALA 238 0.0002

ALA 238 LEU 239 0.0013

LEU 239 VAL 240 0.0002

VAL 240 ASP 241 -0.0056

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 9 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *