Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 8 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0002

ASN 2 TYR 3 -0.0162

TYR 3 GLU 4 -0.0001

GLU 4 ASP 5 -0.0009

ASP 5 VAL 6 0.0003

VAL 6 ILE 7 0.0049

ILE 7 ASP 8 -0.0000

ASP 8 LYS 9 -0.0019

LYS 9 TYR 10 -0.0003

TYR 10 LYS 11 -0.0172

LYS 11 PRO 12 -0.0001

PRO 12 LYS 13 -0.0817

LYS 13 ASP 14 -0.0001

ASP 14 ALA 15 0.0375

ALA 15 THR 16 -0.0000

THR 16 PHE 17 0.0229

PHE 17 ASP 18 -0.0003

ASP 18 HSP 19 0.0522

HSP 19 ALA 20 -0.0002

ALA 20 SER 21 -0.0993

SER 21 TYR 22 0.0003

TYR 22 ASP 23 0.0462

ASP 23 TRP 24 0.0001

TRP 24 ARG 25 -0.0106

ARG 25 LEU 26 0.0000

LEU 26 HSP 27 0.0289

HSP 27 LYS 28 -0.0000

LYS 28 GLY 29 0.0079

GLY 29 VAL 30 0.0002

VAL 30 THR 31 0.0189

THR 31 PRO 32 -0.0001

PRO 32 VAL 33 0.0645

VAL 33 LYS 34 0.0001

LYS 34 ASP 35 0.0022

ASP 35 GLN 36 -0.0003

GLN 36 ALA 37 0.0334

ALA 37 ASN 38 0.0002

ASN 38 CYS 39 0.0300

CYS 39 GLY 40 -0.0002

GLY 40 SER 41 0.0038

SER 41 CYM 42 -0.0000

CYM 42 TRP 43 0.0028

TRP 43 ALA 44 -0.0003

ALA 44 PHE 45 0.0177

PHE 45 SER 46 -0.0001

SER 46 THR 47 -0.0013

THR 47 VAL 48 0.0000

VAL 48 GLY 49 0.0209

GLY 49 VAL 50 0.0003

VAL 50 VAL 51 0.0178

VAL 51 GLU 52 0.0000

GLU 52 SER 53 0.0180

SER 53 GLN 54 -0.0000

GLN 54 TYR 55 0.0293

TYR 55 ALA 56 -0.0003

ALA 56 ILE 57 0.0167

ILE 57 ARG 58 0.0001

ARG 58 LYS 59 0.0399

LYS 59 ASN 60 -0.0000

ASN 60 GLN 61 -0.0043

GLN 61 LEU 62 -0.0001

LEU 62 VAL 63 -0.1041

VAL 63 SER 64 -0.0001

SER 64 ILE 65 -0.0170

ILE 65 SER 66 -0.0001

SER 66 GLU 67 -0.0079

GLU 67 GLN 68 0.0000

GLN 68 GLN 69 0.0158

GLN 69 MET 70 -0.0001

MET 70 VAL 71 -0.0055

VAL 71 ASP 72 -0.0003

ASP 72 CYS 73 0.0060

CYS 73 SER 74 -0.0001

SER 74 THR 75 -0.0072

THR 75 GLN 76 -0.0002

GLN 76 ASN 77 0.0115

ASN 77 THR 78 0.0000

THR 78 GLY 79 0.0182

GLY 79 CYS 80 0.0002

CYS 80 TYR 81 -0.0005

TYR 81 GLY 82 0.0001

GLY 82 GLY 83 0.0172

GLY 83 PHE 84 -0.0001

PHE 84 ILE 85 0.0095

ILE 85 PRO 86 0.0002

PRO 86 LEU 87 -0.0094

LEU 87 ALA 88 -0.0002

ALA 88 PHE 89 0.0086

PHE 89 GLU 90 0.0000

GLU 90 ASP 91 -0.0026

ASP 91 MET 92 0.0003

MET 92 ILE 93 0.0056

ILE 93 GLU 94 0.0000

GLU 94 MET 95 -0.0068

MET 95 GLY 96 -0.0001

GLY 96 GLY 97 0.0027

GLY 97 LEU 98 -0.0001

LEU 98 CYS 99 -0.0127

CYS 99 SER 100 -0.0002

SER 100 SER 101 0.0030

SER 101 GLU 102 0.0002

GLU 102 ASP 103 0.0091

ASP 103 TYR 104 0.0000

TYR 104 PRO 105 -0.0028

PRO 105 TYR 106 -0.0003

TYR 106 VAL 107 -0.0003

VAL 107 ALA 108 0.0006

ALA 108 ASP 109 -0.0037

ASP 109 ILE 110 -0.0000

ILE 110 PRO 111 -0.0014

PRO 111 GLU 112 0.0001

GLU 112 MET 113 -0.0005

MET 113 CYS 114 0.0001

CYS 114 LYS 115 -0.0056

LYS 115 PHE 116 -0.0002

PHE 116 ASP 117 -0.0005

ASP 117 ILE 118 0.0000

ILE 118 CYS 119 0.0021

CYS 119 GLU 120 0.0002

GLU 120 GLN 121 0.0024

GLN 121 LYS 122 0.0000

LYS 122 TYR 123 0.0013

TYR 123 LYS 124 -0.0002

LYS 124 ILE 125 -0.0150

ILE 125 ASN 126 0.0001

ASN 126 ASN 127 -0.0246

ASN 127 PHE 128 -0.0002

PHE 128 LEU 129 -0.0205

LEU 129 GLU 130 -0.0000

GLU 130 ILE 131 -0.0408

ILE 131 PRO 132 0.0001

PRO 132 GLU 133 -0.0057

GLU 133 ASP 134 0.0002

ASP 134 LYS 135 0.0131

LYS 135 PHE 136 -0.0002

PHE 136 LYS 137 -0.0186

LYS 137 GLU 138 0.0001

GLU 138 ALA 139 0.0055

ALA 139 ILE 140 0.0001

ILE 140 ARG 141 -0.0259

ARG 141 PHE 142 -0.0001

PHE 142 LEU 143 0.0061

LEU 143 GLY 144 0.0002

GLY 144 PRO 145 -0.0257

PRO 145 LEU 146 -0.0001

LEU 146 SER 147 0.0007

SER 147 VAL 148 -0.0000

VAL 148 SER 149 0.0122

SER 149 ILE 150 0.0001

ILE 150 ALA 151 0.0083

ALA 151 VAL 152 0.0001

VAL 152 SER 153 0.0122

SER 153 ASP 154 0.0004

ASP 154 ASP 155 0.0017

ASP 155 PHE 156 0.0001

PHE 156 ALA 157 -0.0028

ALA 157 PHE 158 0.0001

PHE 158 TYR 159 -0.0025

TYR 159 ARG 160 0.0002

ARG 160 GLY 161 0.0145

GLY 161 GLY 162 0.0001

GLY 162 ILE 163 0.0372

ILE 163 PHE 164 -0.0001

PHE 164 ASP 165 -0.0041

ASP 165 GLY 166 -0.0002

GLY 166 GLU 167 -0.0113

GLU 167 CYS 168 -0.0003

CYS 168 GLY 169 0.0012

GLY 169 GLU 170 -0.0003

GLU 170 ALA 171 -0.0027

ALA 171 PRO 172 0.0000

PRO 172 ASN 173 -0.0131

ASN 173 HSP 174 0.0003

HSP 174 ALA 175 0.0022

ALA 175 VAL 176 0.0000

VAL 176 ILE 177 -0.0091

ILE 177 LEU 178 0.0002

LEU 178 VAL 179 -0.0002

VAL 179 GLY 180 -0.0001

GLY 180 PHE 181 0.0587

PHE 181 GLY 182 0.0001

GLY 182 ALA 183 0.1602

ALA 183 GLU 184 0.0001

GLU 184 ASP 185 0.2382

ASP 185 ALA 186 0.0002

ALA 186 TYR 187 0.0552

TYR 187 ASP 188 -0.0000

ASP 188 PHE 189 -0.0001

PHE 189 ASP 190 0.0001

ASP 190 THR 191 0.0095

THR 191 LYS 192 0.0001

LYS 192 THR 193 0.0342

THR 193 MET 194 -0.0002

MET 194 LYS 195 -0.0248

LYS 195 LYS 196 -0.0000

LYS 196 ARG 197 -0.0024

ARG 197 TYR 198 0.0001

TYR 198 TYR 199 -0.0492

TYR 199 TYR 200 -0.0001

TYR 200 ILE 201 -0.0069

ILE 201 VAL 202 0.0001

VAL 202 LYS 203 0.0340

LYS 203 ASN 204 0.0002

ASN 204 SER 205 0.0119

SER 205 TRP 206 -0.0001

TRP 206 GLY 207 -0.0030

GLY 207 VAL 208 0.0003

VAL 208 SER 209 0.0186

SER 209 TRP 210 0.0001

TRP 210 GLY 211 0.0174

GLY 211 GLU 212 -0.0004

GLU 212 LYS 213 0.0586

LYS 213 GLY 214 0.0001

GLY 214 PHE 215 0.0166

PHE 215 ILE 216 0.0003

ILE 216 ARG 217 0.0426

ARG 217 LEU 218 0.0000

LEU 218 GLU 219 -0.0109

GLU 219 THR 220 0.0001

THR 220 ASP 221 0.0315

ASP 221 ILE 222 0.0002

ILE 222 ASN 223 -0.0219

ASN 223 GLY 224 -0.0001

GLY 224 TYR 225 0.0061

TYR 225 ARG 226 -0.0001

ARG 226 LYS 227 0.0080

LYS 227 PRO 228 0.0003

PRO 228 CYS 229 -0.0254

CYS 229 SER 230 -0.0000

SER 230 LEU 231 0.0083

LEU 231 GLY 232 -0.0000

GLY 232 THR 233 0.0087

THR 233 GLU 234 0.0003

GLU 234 ALA 235 0.0032

ALA 235 LEU 236 -0.0001

LEU 236 VAL 237 0.0025

VAL 237 ALA 238 0.0000

ALA 238 LEU 239 0.0007

LEU 239 VAL 240 -0.0000

VAL 240 ASP 241 0.0016

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 8 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *