Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 7 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0000

ASN 2 TYR 3 0.0010

TYR 3 GLU 4 0.0004

GLU 4 ASP 5 -0.0131

ASP 5 VAL 6 0.0003

VAL 6 ILE 7 0.0063

ILE 7 ASP 8 -0.0003

ASP 8 LYS 9 -0.0072

LYS 9 TYR 10 -0.0002

TYR 10 LYS 11 -0.0153

LYS 11 PRO 12 0.0002

PRO 12 LYS 13 0.0937

LYS 13 ASP 14 0.0001

ASP 14 ALA 15 -0.0166

ALA 15 THR 16 0.0000

THR 16 PHE 17 0.0096

PHE 17 ASP 18 0.0000

ASP 18 HSP 19 -0.0805

HSP 19 ALA 20 0.0003

ALA 20 SER 21 0.1003

SER 21 TYR 22 -0.0001

TYR 22 ASP 23 -0.0330

ASP 23 TRP 24 0.0001

TRP 24 ARG 25 0.0136

ARG 25 LEU 26 0.0001

LEU 26 HSP 27 -0.0194

HSP 27 LYS 28 0.0000

LYS 28 GLY 29 0.1038

GLY 29 VAL 30 0.0002

VAL 30 THR 31 0.0331

THR 31 PRO 32 0.0003

PRO 32 VAL 33 0.0268

VAL 33 LYS 34 0.0002

LYS 34 ASP 35 0.0376

ASP 35 GLN 36 0.0001

GLN 36 ALA 37 0.0250

ALA 37 ASN 38 -0.0001

ASN 38 CYS 39 0.0166

CYS 39 GLY 40 -0.0001

GLY 40 SER 41 -0.0009

SER 41 CYM 42 0.0002

CYM 42 TRP 43 -0.0019

TRP 43 ALA 44 0.0002

ALA 44 PHE 45 0.0065

PHE 45 SER 46 -0.0000

SER 46 THR 47 -0.0025

THR 47 VAL 48 -0.0000

VAL 48 GLY 49 0.0069

GLY 49 VAL 50 -0.0000

VAL 50 VAL 51 0.0066

VAL 51 GLU 52 -0.0001

GLU 52 SER 53 0.0022

SER 53 GLN 54 0.0001

GLN 54 TYR 55 0.0065

TYR 55 ALA 56 0.0004

ALA 56 ILE 57 -0.0037

ILE 57 ARG 58 0.0004

ARG 58 LYS 59 0.0049

LYS 59 ASN 60 -0.0002

ASN 60 GLN 61 -0.0182

GLN 61 LEU 62 0.0000

LEU 62 VAL 63 -0.0315

VAL 63 SER 64 0.0002

SER 64 ILE 65 -0.0059

ILE 65 SER 66 0.0001

SER 66 GLU 67 -0.0085

GLU 67 GLN 68 -0.0001

GLN 68 GLN 69 0.0020

GLN 69 MET 70 0.0001

MET 70 VAL 71 -0.0049

VAL 71 ASP 72 -0.0000

ASP 72 CYS 73 0.0020

CYS 73 SER 74 -0.0001

SER 74 THR 75 -0.0008

THR 75 GLN 76 0.0000

GLN 76 ASN 77 0.0030

ASN 77 THR 78 -0.0006

THR 78 GLY 79 0.0059

GLY 79 CYS 80 0.0001

CYS 80 TYR 81 0.0005

TYR 81 GLY 82 0.0003

GLY 82 GLY 83 0.0055

GLY 83 PHE 84 -0.0004

PHE 84 ILE 85 0.0047

ILE 85 PRO 86 0.0002

PRO 86 LEU 87 0.0036

LEU 87 ALA 88 -0.0004

ALA 88 PHE 89 -0.0007

PHE 89 GLU 90 -0.0001

GLU 90 ASP 91 0.0036

ASP 91 MET 92 0.0004

MET 92 ILE 93 0.0012

ILE 93 GLU 94 -0.0000

GLU 94 MET 95 0.0012

MET 95 GLY 96 0.0002

GLY 96 GLY 97 0.0015

GLY 97 LEU 98 0.0001

LEU 98 CYS 99 0.0000

CYS 99 SER 100 0.0001

SER 100 SER 101 0.0028

SER 101 GLU 102 -0.0000

GLU 102 ASP 103 0.0039

ASP 103 TYR 104 -0.0001

TYR 104 PRO 105 -0.0009

PRO 105 TYR 106 0.0003

TYR 106 VAL 107 -0.0031

VAL 107 ALA 108 -0.0001

ALA 108 ASP 109 -0.0000

ASP 109 ILE 110 0.0001

ILE 110 PRO 111 -0.0010

PRO 111 GLU 112 0.0002

GLU 112 MET 113 0.0010

MET 113 CYS 114 0.0001

CYS 114 LYS 115 -0.0007

LYS 115 PHE 116 0.0003

PHE 116 ASP 117 0.0001

ASP 117 ILE 118 -0.0001

ILE 118 CYS 119 -0.0006

CYS 119 GLU 120 -0.0002

GLU 120 GLN 121 -0.0008

GLN 121 LYS 122 -0.0003

LYS 122 TYR 123 -0.0006

TYR 123 LYS 124 0.0002

LYS 124 ILE 125 0.0046

ILE 125 ASN 126 0.0003

ASN 126 ASN 127 0.0030

ASN 127 PHE 128 -0.0005

PHE 128 LEU 129 0.0067

LEU 129 GLU 130 0.0002

GLU 130 ILE 131 0.0005

ILE 131 PRO 132 -0.0001

PRO 132 GLU 133 -0.0119

GLU 133 ASP 134 -0.0001

ASP 134 LYS 135 0.0033

LYS 135 PHE 136 0.0004

PHE 136 LYS 137 0.0058

LYS 137 GLU 138 0.0001

GLU 138 ALA 139 0.0135

ALA 139 ILE 140 -0.0001

ILE 140 ARG 141 0.0015

ARG 141 PHE 142 0.0001

PHE 142 LEU 143 0.0163

LEU 143 GLY 144 -0.0001

GLY 144 PRO 145 -0.0006

PRO 145 LEU 146 -0.0004

LEU 146 SER 147 0.0102

SER 147 VAL 148 -0.0001

VAL 148 SER 149 0.0040

SER 149 ILE 150 0.0001

ILE 150 ALA 151 0.0021

ALA 151 VAL 152 -0.0002

VAL 152 SER 153 0.0041

SER 153 ASP 154 -0.0003

ASP 154 ASP 155 -0.0016

ASP 155 PHE 156 -0.0003

PHE 156 ALA 157 -0.0020

ALA 157 PHE 158 -0.0004

PHE 158 TYR 159 -0.0044

TYR 159 ARG 160 0.0004

ARG 160 GLY 161 -0.0057

GLY 161 GLY 162 -0.0005

GLY 162 ILE 163 -0.0040

ILE 163 PHE 164 -0.0002

PHE 164 ASP 165 0.0029

ASP 165 GLY 166 0.0002

GLY 166 GLU 167 -0.0077

GLU 167 CYS 168 -0.0000

CYS 168 GLY 169 -0.0003

GLY 169 GLU 170 0.0003

GLU 170 ALA 171 -0.0019

ALA 171 PRO 172 0.0001

PRO 172 ASN 173 0.0004

ASN 173 HSP 174 0.0002

HSP 174 ALA 175 -0.0027

ALA 175 VAL 176 0.0002

VAL 176 ILE 177 0.0041

ILE 177 LEU 178 -0.0004

LEU 178 VAL 179 -0.0012

VAL 179 GLY 180 -0.0004

GLY 180 PHE 181 0.0397

PHE 181 GLY 182 -0.0002

GLY 182 ALA 183 0.1099

ALA 183 GLU 184 -0.0001

GLU 184 ASP 185 0.0711

ASP 185 ALA 186 -0.0003

ALA 186 TYR 187 -0.0616

TYR 187 ASP 188 0.0000

ASP 188 PHE 189 -0.0002

PHE 189 ASP 190 0.0000

ASP 190 THR 191 0.0041

THR 191 LYS 192 0.0001

LYS 192 THR 193 0.0382

THR 193 MET 194 -0.0003

MET 194 LYS 195 0.0485

LYS 195 LYS 196 0.0002

LYS 196 ARG 197 -0.0728

ARG 197 TYR 198 0.0001

TYR 198 TYR 199 -0.0066

TYR 199 TYR 200 0.0003

TYR 200 ILE 201 -0.0114

ILE 201 VAL 202 0.0001

VAL 202 LYS 203 0.0007

LYS 203 ASN 204 -0.0001

ASN 204 SER 205 0.0014

SER 205 TRP 206 0.0003

TRP 206 GLY 207 -0.0017

GLY 207 VAL 208 0.0001

VAL 208 SER 209 -0.0006

SER 209 TRP 210 -0.0001

TRP 210 GLY 211 -0.0053

GLY 211 GLU 212 -0.0006

GLU 212 LYS 213 0.0128

LYS 213 GLY 214 -0.0001

GLY 214 PHE 215 -0.0012

PHE 215 ILE 216 -0.0001

ILE 216 ARG 217 -0.0072

ARG 217 LEU 218 -0.0002

LEU 218 GLU 219 -0.0464

GLU 219 THR 220 -0.0001

THR 220 ASP 221 0.0174

ASP 221 ILE 222 0.0002

ILE 222 ASN 223 -0.0062

ASN 223 GLY 224 0.0003

GLY 224 TYR 225 0.0012

TYR 225 ARG 226 -0.0000

ARG 226 LYS 227 0.0053

LYS 227 PRO 228 0.0002

PRO 228 CYS 229 -0.0212

CYS 229 SER 230 -0.0002

SER 230 LEU 231 -0.0025

LEU 231 GLY 232 0.0002

GLY 232 THR 233 0.0024

THR 233 GLU 234 0.0001

GLU 234 ALA 235 0.0014

ALA 235 LEU 236 0.0001

LEU 236 VAL 237 -0.0045

VAL 237 ALA 238 -0.0002

ALA 238 LEU 239 -0.0100

LEU 239 VAL 240 -0.0004

VAL 240 ASP 241 -0.0050

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *