Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 31 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 0.0002

ASN 2 TYR 3 -0.0081

TYR 3 GLU 4 0.0002

GLU 4 ASP 5 -0.0084

ASP 5 VAL 6 -0.0001

VAL 6 ILE 7 0.0461

ILE 7 ASP 8 0.0001

ASP 8 LYS 9 -0.0221

LYS 9 TYR 10 0.0003

TYR 10 LYS 11 -0.1110

LYS 11 PRO 12 -0.0003

PRO 12 LYS 13 0.0427

LYS 13 ASP 14 0.0001

ASP 14 ALA 15 -0.0457

ALA 15 THR 16 -0.0000

THR 16 PHE 17 0.1132

PHE 17 ASP 18 0.0001

ASP 18 HSP 19 0.0390

HSP 19 ALA 20 0.0001

ALA 20 SER 21 0.2353

SER 21 TYR 22 0.0001

TYR 22 ASP 23 -0.0331

ASP 23 TRP 24 -0.0001

TRP 24 ARG 25 -0.1041

ARG 25 LEU 26 -0.0003

LEU 26 HSP 27 0.0044

HSP 27 LYS 28 0.0000

LYS 28 GLY 29 -0.0608

GLY 29 VAL 30 -0.0001

VAL 30 THR 31 -0.0025

THR 31 PRO 32 0.0000

PRO 32 VAL 33 -0.0327

VAL 33 LYS 34 -0.0002

LYS 34 ASP 35 -0.2491

ASP 35 GLN 36 -0.0004

GLN 36 ALA 37 -0.0884

ALA 37 ASN 38 -0.0002

ASN 38 CYS 39 -0.1006

CYS 39 GLY 40 0.0004

GLY 40 SER 41 -0.0611

SER 41 CYM 42 0.0003

CYM 42 TRP 43 -0.0688

TRP 43 ALA 44 0.0000

ALA 44 PHE 45 -0.0538

PHE 45 SER 46 0.0000

SER 46 THR 47 -0.0706

THR 47 VAL 48 -0.0005

VAL 48 GLY 49 0.0279

GLY 49 VAL 50 -0.0006

VAL 50 VAL 51 -0.0017

VAL 51 GLU 52 0.0001

GLU 52 SER 53 0.0754

SER 53 GLN 54 -0.0001

GLN 54 TYR 55 0.0312

TYR 55 ALA 56 -0.0001

ALA 56 ILE 57 0.0147

ILE 57 ARG 58 0.0005

ARG 58 LYS 59 -0.1084

LYS 59 ASN 60 -0.0001

ASN 60 GLN 61 0.1361

GLN 61 LEU 62 -0.0001

LEU 62 VAL 63 0.0354

VAL 63 SER 64 -0.0001

SER 64 ILE 65 -0.0805

ILE 65 SER 66 0.0002

SER 66 GLU 67 -0.0701

GLU 67 GLN 68 -0.0005

GLN 68 GLN 69 0.0330

GLN 69 MET 70 -0.0001

MET 70 VAL 71 -0.0608

VAL 71 ASP 72 -0.0001

ASP 72 CYS 73 0.0443

CYS 73 SER 74 0.0001

SER 74 THR 75 -0.0759

THR 75 GLN 76 0.0003

GLN 76 ASN 77 0.0002

ASN 77 THR 78 -0.0003

THR 78 GLY 79 -0.0122

GLY 79 CYS 80 0.0002

CYS 80 TYR 81 0.0060

TYR 81 GLY 82 -0.0001

GLY 82 GLY 83 0.0170

GLY 83 PHE 84 -0.0000

PHE 84 ILE 85 0.0274

ILE 85 PRO 86 -0.0001

PRO 86 LEU 87 0.1696

LEU 87 ALA 88 0.0004

ALA 88 PHE 89 -0.0023

PHE 89 GLU 90 -0.0000

GLU 90 ASP 91 0.0699

ASP 91 MET 92 0.0000

MET 92 ILE 93 -0.0244

ILE 93 GLU 94 -0.0001

GLU 94 MET 95 -0.0174

MET 95 GLY 96 -0.0001

GLY 96 GLY 97 -0.0520

GLY 97 LEU 98 -0.0000

LEU 98 CYS 99 0.0460

CYS 99 SER 100 -0.0001

SER 100 SER 101 0.0098

SER 101 GLU 102 0.0001

GLU 102 ASP 103 0.0976

ASP 103 TYR 104 -0.0001

TYR 104 PRO 105 0.1590

PRO 105 TYR 106 0.0001

TYR 106 VAL 107 -0.0586

VAL 107 ALA 108 0.0003

ALA 108 ASP 109 -0.2983

ASP 109 ILE 110 0.0001

ILE 110 PRO 111 0.0607

PRO 111 GLU 112 0.0000

GLU 112 MET 113 -0.0453

MET 113 CYS 114 0.0001

CYS 114 LYS 115 0.0115

LYS 115 PHE 116 -0.0001

PHE 116 ASP 117 0.1421

ASP 117 ILE 118 0.0000

ILE 118 CYS 119 0.0493

CYS 119 GLU 120 -0.0001

GLU 120 GLN 121 0.0668

GLN 121 LYS 122 0.0001

LYS 122 TYR 123 0.0785

TYR 123 LYS 124 -0.0000

LYS 124 ILE 125 0.2351

ILE 125 ASN 126 -0.0002

ASN 126 ASN 127 0.1542

ASN 127 PHE 128 0.0002

PHE 128 LEU 129 0.2369

LEU 129 GLU 130 0.0000

GLU 130 ILE 131 0.1952

ILE 131 PRO 132 -0.0001

PRO 132 GLU 133 0.0065

GLU 133 ASP 134 0.0002

ASP 134 LYS 135 0.0599

LYS 135 PHE 136 0.0001

PHE 136 LYS 137 0.0688

LYS 137 GLU 138 0.0003

GLU 138 ALA 139 0.2064

ALA 139 ILE 140 0.0002

ILE 140 ARG 141 -0.0121

ARG 141 PHE 142 0.0002

PHE 142 LEU 143 0.0429

LEU 143 GLY 144 0.0003

GLY 144 PRO 145 -0.0907

PRO 145 LEU 146 -0.0001

LEU 146 SER 147 0.0555

SER 147 VAL 148 -0.0002

VAL 148 SER 149 -0.1168

SER 149 ILE 150 -0.0001

ILE 150 ALA 151 -0.0842

ALA 151 VAL 152 0.0000

VAL 152 SER 153 0.0349

SER 153 ASP 154 -0.0000

ASP 154 ASP 155 0.0339

ASP 155 PHE 156 -0.0004

PHE 156 ALA 157 -0.0822

ALA 157 PHE 158 -0.0003

PHE 158 TYR 159 0.0538

TYR 159 ARG 160 0.0001

ARG 160 GLY 161 0.0156

GLY 161 GLY 162 -0.0001

GLY 162 ILE 163 -0.0321

ILE 163 PHE 164 0.0000

PHE 164 ASP 165 -0.0316

ASP 165 GLY 166 -0.0003

GLY 166 GLU 167 0.0523

GLU 167 CYS 168 0.0002

CYS 168 GLY 169 0.0535

GLY 169 GLU 170 -0.0002

GLU 170 ALA 171 0.0481

ALA 171 PRO 172 0.0001

PRO 172 ASN 173 0.1388

ASN 173 HSP 174 -0.0003

HSP 174 ALA 175 -0.0903

ALA 175 VAL 176 0.0001

VAL 176 ILE 177 -0.0676

ILE 177 LEU 178 -0.0004

LEU 178 VAL 179 0.0144

VAL 179 GLY 180 0.0002

GLY 180 PHE 181 0.1722

PHE 181 GLY 182 0.0002

GLY 182 ALA 183 0.1433

ALA 183 GLU 184 -0.0003

GLU 184 ASP 185 0.2554

ASP 185 ALA 186 0.0001

ALA 186 TYR 187 0.0476

TYR 187 ASP 188 -0.0001

ASP 188 PHE 189 -0.0428

PHE 189 ASP 190 0.0000

ASP 190 THR 191 0.0808

THR 191 LYS 192 -0.0002

LYS 192 THR 193 0.2911

THR 193 MET 194 0.0000

MET 194 LYS 195 0.2066

LYS 195 LYS 196 0.0002

LYS 196 ARG 197 0.2399

ARG 197 TYR 198 0.0002

TYR 198 TYR 199 0.1280

TYR 199 TYR 200 -0.0001

TYR 200 ILE 201 -0.0105

ILE 201 VAL 202 -0.0003

VAL 202 LYS 203 0.0973

LYS 203 ASN 204 -0.0000

ASN 204 SER 205 0.0268

SER 205 TRP 206 -0.0002

TRP 206 GLY 207 -0.0579

GLY 207 VAL 208 0.0004

VAL 208 SER 209 -0.1307

SER 209 TRP 210 0.0002

TRP 210 GLY 211 -0.0209

GLY 211 GLU 212 0.0004

GLU 212 LYS 213 -0.1394

LYS 213 GLY 214 -0.0003

GLY 214 PHE 215 0.0057

PHE 215 ILE 216 0.0001

ILE 216 ARG 217 0.0308

ARG 217 LEU 218 -0.0002

LEU 218 GLU 219 0.0907

GLU 219 THR 220 -0.0004

THR 220 ASP 221 -0.1398

ASP 221 ILE 222 -0.0002

ILE 222 ASN 223 -0.1567

ASN 223 GLY 224 0.0002

GLY 224 TYR 225 -0.0091

TYR 225 ARG 226 0.0000

ARG 226 LYS 227 -0.0489

LYS 227 PRO 228 -0.0000

PRO 228 CYS 229 -0.2649

CYS 229 SER 230 -0.0001

SER 230 LEU 231 -0.1754

LEU 231 GLY 232 -0.0003

GLY 232 THR 233 0.0506

THR 233 GLU 234 -0.0002

GLU 234 ALA 235 -0.0327

ALA 235 LEU 236 0.0002

LEU 236 VAL 237 -0.0566

VAL 237 ALA 238 -0.0003

ALA 238 LEU 239 -0.0809

LEU 239 VAL 240 0.0002

VAL 240 ASP 241 0.0044

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 31 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *