Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 30 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0003

ASN 2 TYR 3 -0.1037

TYR 3 GLU 4 0.0000

GLU 4 ASP 5 -0.0912

ASP 5 VAL 6 -0.0001

VAL 6 ILE 7 -0.0037

ILE 7 ASP 8 0.0003

ASP 8 LYS 9 -0.0270

LYS 9 TYR 10 -0.0001

TYR 10 LYS 11 0.0777

LYS 11 PRO 12 -0.0001

PRO 12 LYS 13 0.0137

LYS 13 ASP 14 0.0000

ASP 14 ALA 15 -0.2076

ALA 15 THR 16 -0.0002

THR 16 PHE 17 -0.1260

PHE 17 ASP 18 0.0001

ASP 18 HSP 19 0.4465

HSP 19 ALA 20 -0.0002

ALA 20 SER 21 0.0651

SER 21 TYR 22 -0.0001

TYR 22 ASP 23 -0.0951

ASP 23 TRP 24 0.0001

TRP 24 ARG 25 -0.1083

ARG 25 LEU 26 -0.0002

LEU 26 HSP 27 0.1235

HSP 27 LYS 28 0.0003

LYS 28 GLY 29 0.3513

GLY 29 VAL 30 -0.0000

VAL 30 THR 31 0.1533

THR 31 PRO 32 -0.0001

PRO 32 VAL 33 -0.0199

VAL 33 LYS 34 0.0001

LYS 34 ASP 35 -0.0344

ASP 35 GLN 36 -0.0004

GLN 36 ALA 37 0.0007

ALA 37 ASN 38 -0.0000

ASN 38 CYS 39 0.0176

CYS 39 GLY 40 -0.0000

GLY 40 SER 41 0.0035

SER 41 CYM 42 -0.0001

CYM 42 TRP 43 -0.0110

TRP 43 ALA 44 -0.0001

ALA 44 PHE 45 0.0346

PHE 45 SER 46 0.0000

SER 46 THR 47 0.0080

THR 47 VAL 48 -0.0000

VAL 48 GLY 49 0.0408

GLY 49 VAL 50 -0.0001

VAL 50 VAL 51 0.1194

VAL 51 GLU 52 0.0002

GLU 52 SER 53 0.0098

SER 53 GLN 54 0.0003

GLN 54 TYR 55 0.0899

TYR 55 ALA 56 -0.0000

ALA 56 ILE 57 -0.0209

ILE 57 ARG 58 -0.0001

ARG 58 LYS 59 -0.1328

LYS 59 ASN 60 -0.0004

ASN 60 GLN 61 0.0393

GLN 61 LEU 62 0.0004

LEU 62 VAL 63 0.4346

VAL 63 SER 64 0.0002

SER 64 ILE 65 0.1365

ILE 65 SER 66 0.0003

SER 66 GLU 67 0.0480

GLU 67 GLN 68 0.0001

GLN 68 GLN 69 -0.0350

GLN 69 MET 70 -0.0002

MET 70 VAL 71 0.0057

VAL 71 ASP 72 0.0002

ASP 72 CYS 73 0.0657

CYS 73 SER 74 0.0001

SER 74 THR 75 0.0004

THR 75 GLN 76 -0.0002

GLN 76 ASN 77 -0.0054

ASN 77 THR 78 0.0002

THR 78 GLY 79 0.0003

GLY 79 CYS 80 0.0002

CYS 80 TYR 81 -0.0279

TYR 81 GLY 82 0.0002

GLY 82 GLY 83 -0.0246

GLY 83 PHE 84 -0.0004

PHE 84 ILE 85 0.0100

ILE 85 PRO 86 -0.0001

PRO 86 LEU 87 0.0884

LEU 87 ALA 88 0.0003

ALA 88 PHE 89 0.0043

PHE 89 GLU 90 -0.0001

GLU 90 ASP 91 0.0868

ASP 91 MET 92 -0.0002

MET 92 ILE 93 -0.0131

ILE 93 GLU 94 0.0004

GLU 94 MET 95 0.0905

MET 95 GLY 96 0.0001

GLY 96 GLY 97 0.0374

GLY 97 LEU 98 0.0003

LEU 98 CYS 99 -0.0063

CYS 99 SER 100 -0.0001

SER 100 SER 101 0.0353

SER 101 GLU 102 -0.0005

GLU 102 ASP 103 -0.1840

ASP 103 TYR 104 -0.0002

TYR 104 PRO 105 0.1216

PRO 105 TYR 106 -0.0001

TYR 106 VAL 107 0.1194

VAL 107 ALA 108 -0.0002

ALA 108 ASP 109 0.2698

ASP 109 ILE 110 -0.0000

ILE 110 PRO 111 0.0045

PRO 111 GLU 112 0.0000

GLU 112 MET 113 -0.0635

MET 113 CYS 114 0.0005

CYS 114 LYS 115 0.0387

LYS 115 PHE 116 0.0001

PHE 116 ASP 117 -0.1734

ASP 117 ILE 118 0.0001

ILE 118 CYS 119 0.0094

CYS 119 GLU 120 0.0002

GLU 120 GLN 121 0.1131

GLN 121 LYS 122 -0.0000

LYS 122 TYR 123 0.2904

TYR 123 LYS 124 -0.0001

LYS 124 ILE 125 0.1086

ILE 125 ASN 126 0.0000

ASN 126 ASN 127 0.0430

ASN 127 PHE 128 0.0001

PHE 128 LEU 129 0.1015

LEU 129 GLU 130 0.0002

GLU 130 ILE 131 0.0704

ILE 131 PRO 132 -0.0003

PRO 132 GLU 133 -0.0780

GLU 133 ASP 134 0.0000

ASP 134 LYS 135 -0.0709

LYS 135 PHE 136 -0.0001

PHE 136 LYS 137 0.0590

LYS 137 GLU 138 -0.0000

GLU 138 ALA 139 -0.0107

ALA 139 ILE 140 0.0001

ILE 140 ARG 141 -0.0073

ARG 141 PHE 142 -0.0004

PHE 142 LEU 143 0.0328

LEU 143 GLY 144 0.0001

GLY 144 PRO 145 -0.1072

PRO 145 LEU 146 -0.0001

LEU 146 SER 147 -0.0077

SER 147 VAL 148 0.0002

VAL 148 SER 149 -0.0803

SER 149 ILE 150 -0.0001

ILE 150 ALA 151 -0.0449

ALA 151 VAL 152 0.0003

VAL 152 SER 153 -0.0198

SER 153 ASP 154 -0.0001

ASP 154 ASP 155 -0.0162

ASP 155 PHE 156 -0.0000

PHE 156 ALA 157 -0.0122

ALA 157 PHE 158 -0.0002

PHE 158 TYR 159 -0.0152

TYR 159 ARG 160 -0.0003

ARG 160 GLY 161 0.0328

GLY 161 GLY 162 -0.0001

GLY 162 ILE 163 0.0642

ILE 163 PHE 164 -0.0002

PHE 164 ASP 165 0.0018

ASP 165 GLY 166 0.0001

GLY 166 GLU 167 -0.0060

GLU 167 CYS 168 0.0002

CYS 168 GLY 169 0.0225

GLY 169 GLU 170 -0.0003

GLU 170 ALA 171 -0.0269

ALA 171 PRO 172 0.0000

PRO 172 ASN 173 0.0158

ASN 173 HSP 174 0.0001

HSP 174 ALA 175 -0.0477

ALA 175 VAL 176 0.0000

VAL 176 ILE 177 -0.0532

ILE 177 LEU 178 -0.0003

LEU 178 VAL 179 -0.0035

VAL 179 GLY 180 0.0000

GLY 180 PHE 181 0.1124

PHE 181 GLY 182 0.0001

GLY 182 ALA 183 0.1416

ALA 183 GLU 184 -0.0001

GLU 184 ASP 185 0.0770

ASP 185 ALA 186 0.0003

ALA 186 TYR 187 -0.2148

TYR 187 ASP 188 -0.0004

ASP 188 PHE 189 -0.0611

PHE 189 ASP 190 0.0001

ASP 190 THR 191 0.0092

THR 191 LYS 192 -0.0001

LYS 192 THR 193 0.2220

THR 193 MET 194 -0.0000

MET 194 LYS 195 0.2128

LYS 195 LYS 196 -0.0000

LYS 196 ARG 197 0.2637

ARG 197 TYR 198 0.0004

TYR 198 TYR 199 0.1818

TYR 199 TYR 200 0.0000

TYR 200 ILE 201 0.0101

ILE 201 VAL 202 0.0004

VAL 202 LYS 203 0.1171

LYS 203 ASN 204 -0.0002

ASN 204 SER 205 0.0532

SER 205 TRP 206 -0.0003

TRP 206 GLY 207 -0.0058

GLY 207 VAL 208 0.0000

VAL 208 SER 209 -0.0069

SER 209 TRP 210 0.0003

TRP 210 GLY 211 0.0357

GLY 211 GLU 212 -0.0003

GLU 212 LYS 213 0.0548

LYS 213 GLY 214 0.0005

GLY 214 PHE 215 0.0284

PHE 215 ILE 216 -0.0002

ILE 216 ARG 217 0.1348

ARG 217 LEU 218 0.0002

LEU 218 GLU 219 0.2056

GLU 219 THR 220 -0.0000

THR 220 ASP 221 0.0515

ASP 221 ILE 222 -0.0001

ILE 222 ASN 223 -0.0262

ASN 223 GLY 224 -0.0003

GLY 224 TYR 225 -0.1576

TYR 225 ARG 226 0.0001

ARG 226 LYS 227 0.1245

LYS 227 PRO 228 -0.0002

PRO 228 CYS 229 0.1888

CYS 229 SER 230 -0.0003

SER 230 LEU 231 -0.0673

LEU 231 GLY 232 0.0001

GLY 232 THR 233 -0.0284

THR 233 GLU 234 -0.0003

GLU 234 ALA 235 0.0100

ALA 235 LEU 236 0.0002

LEU 236 VAL 237 -0.0156

VAL 237 ALA 238 -0.0001

ALA 238 LEU 239 -0.0127

LEU 239 VAL 240 0.0000

VAL 240 ASP 241 -0.0208

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 30 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *