Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 29 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 0.0001

ASN 2 TYR 3 -0.0143

TYR 3 GLU 4 -0.0001

GLU 4 ASP 5 -0.0116

ASP 5 VAL 6 0.0001

VAL 6 ILE 7 -0.0503

ILE 7 ASP 8 0.0002

ASP 8 LYS 9 0.0265

LYS 9 TYR 10 -0.0002

TYR 10 LYS 11 0.1463

LYS 11 PRO 12 -0.0003

PRO 12 LYS 13 0.1093

LYS 13 ASP 14 -0.0001

ASP 14 ALA 15 -0.1006

ALA 15 THR 16 -0.0001

THR 16 PHE 17 -0.1044

PHE 17 ASP 18 0.0003

ASP 18 HSP 19 -0.1369

HSP 19 ALA 20 0.0001

ALA 20 SER 21 -0.1365

SER 21 TYR 22 -0.0001

TYR 22 ASP 23 -0.3259

ASP 23 TRP 24 0.0000

TRP 24 ARG 25 0.0074

ARG 25 LEU 26 -0.0002

LEU 26 HSP 27 -0.0923

HSP 27 LYS 28 0.0001

LYS 28 GLY 29 -0.2948

GLY 29 VAL 30 0.0000

VAL 30 THR 31 -0.1368

THR 31 PRO 32 -0.0001

PRO 32 VAL 33 0.0244

VAL 33 LYS 34 0.0002

LYS 34 ASP 35 -0.3635

ASP 35 GLN 36 -0.0002

GLN 36 ALA 37 0.1184

ALA 37 ASN 38 0.0001

ASN 38 CYS 39 0.2338

CYS 39 GLY 40 -0.0001

GLY 40 SER 41 0.0429

SER 41 CYM 42 -0.0001

CYM 42 TRP 43 0.0544

TRP 43 ALA 44 0.0001

ALA 44 PHE 45 0.0198

PHE 45 SER 46 0.0001

SER 46 THR 47 -0.0306

THR 47 VAL 48 0.0001

VAL 48 GLY 49 0.0313

GLY 49 VAL 50 -0.0001

VAL 50 VAL 51 0.0735

VAL 51 GLU 52 0.0000

GLU 52 SER 53 0.0332

SER 53 GLN 54 0.0001

GLN 54 TYR 55 0.1207

TYR 55 ALA 56 0.0002

ALA 56 ILE 57 0.0013

ILE 57 ARG 58 -0.0001

ARG 58 LYS 59 0.1060

LYS 59 ASN 60 0.0001

ASN 60 GLN 61 -0.1465

GLN 61 LEU 62 0.0000

LEU 62 VAL 63 -0.0674

VAL 63 SER 64 0.0001

SER 64 ILE 65 -0.0524

ILE 65 SER 66 0.0003

SER 66 GLU 67 -0.0559

GLU 67 GLN 68 -0.0001

GLN 68 GLN 69 0.0689

GLN 69 MET 70 0.0000

MET 70 VAL 71 -0.0354

VAL 71 ASP 72 0.0001

ASP 72 CYS 73 0.1203

CYS 73 SER 74 0.0001

SER 74 THR 75 -0.0599

THR 75 GLN 76 0.0001

GLN 76 ASN 77 0.0947

ASN 77 THR 78 -0.0001

THR 78 GLY 79 0.1838

GLY 79 CYS 80 -0.0002

CYS 80 TYR 81 0.0118

TYR 81 GLY 82 0.0001

GLY 82 GLY 83 0.1480

GLY 83 PHE 84 -0.0005

PHE 84 ILE 85 -0.0273

ILE 85 PRO 86 -0.0000

PRO 86 LEU 87 0.0765

LEU 87 ALA 88 -0.0002

ALA 88 PHE 89 0.0139

PHE 89 GLU 90 0.0001

GLU 90 ASP 91 0.0521

ASP 91 MET 92 -0.0001

MET 92 ILE 93 -0.0192

ILE 93 GLU 94 0.0003

GLU 94 MET 95 0.0318

MET 95 GLY 96 0.0001

GLY 96 GLY 97 -0.0593

GLY 97 LEU 98 0.0002

LEU 98 CYS 99 0.0352

CYS 99 SER 100 -0.0002

SER 100 SER 101 -0.0250

SER 101 GLU 102 -0.0001

GLU 102 ASP 103 0.0173

ASP 103 TYR 104 -0.0000

TYR 104 PRO 105 -0.0337

PRO 105 TYR 106 -0.0001

TYR 106 VAL 107 -0.1196

VAL 107 ALA 108 -0.0001

ALA 108 ASP 109 0.0152

ASP 109 ILE 110 -0.0001

ILE 110 PRO 111 0.0703

PRO 111 GLU 112 -0.0004

GLU 112 MET 113 0.0794

MET 113 CYS 114 0.0001

CYS 114 LYS 115 0.1040

LYS 115 PHE 116 0.0001

PHE 116 ASP 117 0.0532

ASP 117 ILE 118 -0.0003

ILE 118 CYS 119 -0.0162

CYS 119 GLU 120 -0.0003

GLU 120 GLN 121 0.0521

GLN 121 LYS 122 -0.0000

LYS 122 TYR 123 0.0997

TYR 123 LYS 124 0.0002

LYS 124 ILE 125 0.1124

ILE 125 ASN 126 -0.0000

ASN 126 ASN 127 0.0541

ASN 127 PHE 128 -0.0000

PHE 128 LEU 129 0.0825

LEU 129 GLU 130 0.0003

GLU 130 ILE 131 0.0426

ILE 131 PRO 132 -0.0001

PRO 132 GLU 133 0.0388

GLU 133 ASP 134 0.0001

ASP 134 LYS 135 -0.1079

LYS 135 PHE 136 -0.0003

PHE 136 LYS 137 0.1302

LYS 137 GLU 138 -0.0001

GLU 138 ALA 139 -0.0809

ALA 139 ILE 140 -0.0001

ILE 140 ARG 141 0.0622

ARG 141 PHE 142 0.0003

PHE 142 LEU 143 0.0324

LEU 143 GLY 144 -0.0004

GLY 144 PRO 145 -0.1152

PRO 145 LEU 146 0.0001

LEU 146 SER 147 0.0464

SER 147 VAL 148 -0.0001

VAL 148 SER 149 0.0092

SER 149 ILE 150 -0.0000

ILE 150 ALA 151 -0.0269

ALA 151 VAL 152 0.0002

VAL 152 SER 153 0.0187

SER 153 ASP 154 -0.0000

ASP 154 ASP 155 -0.0807

ASP 155 PHE 156 0.0002

PHE 156 ALA 157 0.0509

ALA 157 PHE 158 -0.0001

PHE 158 TYR 159 -0.1832

TYR 159 ARG 160 -0.0002

ARG 160 GLY 161 -0.1601

GLY 161 GLY 162 0.0003

GLY 162 ILE 163 -0.0308

ILE 163 PHE 164 -0.0002

PHE 164 ASP 165 0.0217

ASP 165 GLY 166 -0.0001

GLY 166 GLU 167 -0.2020

GLU 167 CYS 168 0.0001

CYS 168 GLY 169 -0.1222

GLY 169 GLU 170 0.0003

GLU 170 ALA 171 0.0047

ALA 171 PRO 172 0.0001

PRO 172 ASN 173 0.1181

ASN 173 HSP 174 0.0002

HSP 174 ALA 175 -0.0796

ALA 175 VAL 176 -0.0001

VAL 176 ILE 177 -0.1197

ILE 177 LEU 178 0.0002

LEU 178 VAL 179 0.0111

VAL 179 GLY 180 0.0001

GLY 180 PHE 181 -0.1507

PHE 181 GLY 182 0.0001

GLY 182 ALA 183 0.0190

ALA 183 GLU 184 -0.0003

GLU 184 ASP 185 0.1558

ASP 185 ALA 186 0.0000

ALA 186 TYR 187 0.1769

TYR 187 ASP 188 -0.0000

ASP 188 PHE 189 0.0053

PHE 189 ASP 190 -0.0001

ASP 190 THR 191 0.1294

THR 191 LYS 192 0.0002

LYS 192 THR 193 0.1518

THR 193 MET 194 -0.0002

MET 194 LYS 195 -0.0107

LYS 195 LYS 196 0.0000

LYS 196 ARG 197 -0.0463

ARG 197 TYR 198 0.0000

TYR 198 TYR 199 -0.0220

TYR 199 TYR 200 -0.0000

TYR 200 ILE 201 -0.0793

ILE 201 VAL 202 0.0003

VAL 202 LYS 203 0.0404

LYS 203 ASN 204 0.0003

ASN 204 SER 205 0.0446

SER 205 TRP 206 -0.0002

TRP 206 GLY 207 0.0500

GLY 207 VAL 208 -0.0003

VAL 208 SER 209 0.0009

SER 209 TRP 210 0.0000

TRP 210 GLY 211 -0.0338

GLY 211 GLU 212 -0.0005

GLU 212 LYS 213 -0.0401

LYS 213 GLY 214 0.0002

GLY 214 PHE 215 -0.0183

PHE 215 ILE 216 0.0001

ILE 216 ARG 217 -0.0092

ARG 217 LEU 218 0.0003

LEU 218 GLU 219 0.1386

GLU 219 THR 220 0.0000

THR 220 ASP 221 0.0265

ASP 221 ILE 222 0.0001

ILE 222 ASN 223 -0.0216

ASN 223 GLY 224 0.0001

GLY 224 TYR 225 -0.3022

TYR 225 ARG 226 0.0002

ARG 226 LYS 227 0.2751

LYS 227 PRO 228 -0.0001

PRO 228 CYS 229 0.3830

CYS 229 SER 230 0.0003

SER 230 LEU 231 0.1150

LEU 231 GLY 232 -0.0001

GLY 232 THR 233 0.0118

THR 233 GLU 234 -0.0001

GLU 234 ALA 235 -0.0730

ALA 235 LEU 236 -0.0001

LEU 236 VAL 237 0.0561

VAL 237 ALA 238 0.0002

ALA 238 LEU 239 -0.0009

LEU 239 VAL 240 0.0002

VAL 240 ASP 241 -0.0249

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 29 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *