Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 28 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 0.0002

ASN 2 TYR 3 -0.0847

TYR 3 GLU 4 0.0000

GLU 4 ASP 5 -0.1182

ASP 5 VAL 6 -0.0001

VAL 6 ILE 7 -0.0178

ILE 7 ASP 8 -0.0001

ASP 8 LYS 9 0.0198

LYS 9 TYR 10 -0.0002

TYR 10 LYS 11 0.0565

LYS 11 PRO 12 0.0002

PRO 12 LYS 13 -0.0072

LYS 13 ASP 14 0.0000

ASP 14 ALA 15 -0.0047

ALA 15 THR 16 0.0002

THR 16 PHE 17 -0.0336

PHE 17 ASP 18 -0.0000

ASP 18 HSP 19 -0.1900

HSP 19 ALA 20 -0.0001

ALA 20 SER 21 -0.1779

SER 21 TYR 22 -0.0002

TYR 22 ASP 23 0.0746

ASP 23 TRP 24 0.0002

TRP 24 ARG 25 0.2161

ARG 25 LEU 26 -0.0001

LEU 26 HSP 27 0.0374

HSP 27 LYS 28 0.0003

LYS 28 GLY 29 -0.2097

GLY 29 VAL 30 -0.0000

VAL 30 THR 31 -0.0242

THR 31 PRO 32 -0.0001

PRO 32 VAL 33 0.0259

VAL 33 LYS 34 0.0002

LYS 34 ASP 35 0.3922

ASP 35 GLN 36 -0.0001

GLN 36 ALA 37 0.0410

ALA 37 ASN 38 -0.0003

ASN 38 CYS 39 -0.0634

CYS 39 GLY 40 -0.0002

GLY 40 SER 41 -0.0132

SER 41 CYM 42 -0.0000

CYM 42 TRP 43 0.0055

TRP 43 ALA 44 0.0004

ALA 44 PHE 45 0.0170

PHE 45 SER 46 0.0000

SER 46 THR 47 0.0599

THR 47 VAL 48 0.0004

VAL 48 GLY 49 0.0534

GLY 49 VAL 50 0.0000

VAL 50 VAL 51 0.1599

VAL 51 GLU 52 0.0002

GLU 52 SER 53 0.0654

SER 53 GLN 54 0.0001

GLN 54 TYR 55 0.0955

TYR 55 ALA 56 -0.0002

ALA 56 ILE 57 0.0187

ILE 57 ARG 58 0.0001

ARG 58 LYS 59 0.2157

LYS 59 ASN 60 0.0000

ASN 60 GLN 61 -0.0135

GLN 61 LEU 62 0.0000

LEU 62 VAL 63 0.0510

VAL 63 SER 64 0.0004

SER 64 ILE 65 -0.0287

ILE 65 SER 66 -0.0001

SER 66 GLU 67 0.1129

GLU 67 GLN 68 -0.0001

GLN 68 GLN 69 0.0215

GLN 69 MET 70 -0.0002

MET 70 VAL 71 0.0176

VAL 71 ASP 72 -0.0003

ASP 72 CYS 73 0.0868

CYS 73 SER 74 -0.0001

SER 74 THR 75 0.0065

THR 75 GLN 76 0.0003

GLN 76 ASN 77 0.0070

ASN 77 THR 78 -0.0005

THR 78 GLY 79 -0.0178

GLY 79 CYS 80 -0.0003

CYS 80 TYR 81 -0.0064

TYR 81 GLY 82 0.0001

GLY 82 GLY 83 -0.1069

GLY 83 PHE 84 -0.0001

PHE 84 ILE 85 -0.0763

ILE 85 PRO 86 -0.0000

PRO 86 LEU 87 -0.0192

LEU 87 ALA 88 0.0002

ALA 88 PHE 89 -0.0344

PHE 89 GLU 90 0.0002

GLU 90 ASP 91 0.0236

ASP 91 MET 92 -0.0001

MET 92 ILE 93 0.0029

ILE 93 GLU 94 -0.0002

GLU 94 MET 95 0.0140

MET 95 GLY 96 0.0001

GLY 96 GLY 97 -0.0066

GLY 97 LEU 98 -0.0000

LEU 98 CYS 99 -0.0316

CYS 99 SER 100 -0.0002

SER 100 SER 101 0.0108

SER 101 GLU 102 -0.0001

GLU 102 ASP 103 -0.0636

ASP 103 TYR 104 -0.0001

TYR 104 PRO 105 0.0756

PRO 105 TYR 106 -0.0001

TYR 106 VAL 107 0.0505

VAL 107 ALA 108 0.0000

ALA 108 ASP 109 -0.0395

ASP 109 ILE 110 -0.0002

ILE 110 PRO 111 0.0747

PRO 111 GLU 112 -0.0000

GLU 112 MET 113 0.0031

MET 113 CYS 114 -0.0004

CYS 114 LYS 115 -0.0107

LYS 115 PHE 116 -0.0001

PHE 116 ASP 117 -0.0446

ASP 117 ILE 118 -0.0001

ILE 118 CYS 119 -0.0001

CYS 119 GLU 120 -0.0002

GLU 120 GLN 121 0.1347

GLN 121 LYS 122 -0.0001

LYS 122 TYR 123 0.2582

TYR 123 LYS 124 -0.0002

LYS 124 ILE 125 0.1840

ILE 125 ASN 126 -0.0001

ASN 126 ASN 127 0.0933

ASN 127 PHE 128 0.0000

PHE 128 LEU 129 0.0607

LEU 129 GLU 130 -0.0002

GLU 130 ILE 131 0.0737

ILE 131 PRO 132 -0.0001

PRO 132 GLU 133 -0.1116

GLU 133 ASP 134 -0.0000

ASP 134 LYS 135 -0.0294

LYS 135 PHE 136 -0.0001

PHE 136 LYS 137 -0.0069

LYS 137 GLU 138 0.0004

GLU 138 ALA 139 0.0546

ALA 139 ILE 140 -0.0000

ILE 140 ARG 141 -0.0274

ARG 141 PHE 142 0.0002

PHE 142 LEU 143 0.0371

LEU 143 GLY 144 0.0001

GLY 144 PRO 145 0.0242

PRO 145 LEU 146 0.0002

LEU 146 SER 147 -0.0186

SER 147 VAL 148 0.0001

VAL 148 SER 149 -0.0387

SER 149 ILE 150 -0.0000

ILE 150 ALA 151 -0.0083

ALA 151 VAL 152 0.0001

VAL 152 SER 153 -0.0218

SER 153 ASP 154 -0.0000

ASP 154 ASP 155 0.0062

ASP 155 PHE 156 -0.0001

PHE 156 ALA 157 -0.0273

ALA 157 PHE 158 -0.0002

PHE 158 TYR 159 0.0673

TYR 159 ARG 160 -0.0000

ARG 160 GLY 161 0.1436

GLY 161 GLY 162 -0.0001

GLY 162 ILE 163 0.1216

ILE 163 PHE 164 0.0001

PHE 164 ASP 165 -0.0054

ASP 165 GLY 166 0.0000

GLY 166 GLU 167 0.1071

GLU 167 CYS 168 -0.0000

CYS 168 GLY 169 0.0616

GLY 169 GLU 170 -0.0001

GLU 170 ALA 171 0.0163

ALA 171 PRO 172 0.0002

PRO 172 ASN 173 -0.0777

ASN 173 HSP 174 -0.0000

HSP 174 ALA 175 0.0692

ALA 175 VAL 176 0.0001

VAL 176 ILE 177 0.0532

ILE 177 LEU 178 0.0001

LEU 178 VAL 179 -0.0142

VAL 179 GLY 180 0.0000

GLY 180 PHE 181 0.2528

PHE 181 GLY 182 -0.0003

GLY 182 ALA 183 0.0699

ALA 183 GLU 184 -0.0001

GLU 184 ASP 185 -0.0224

ASP 185 ALA 186 -0.0002

ALA 186 TYR 187 -0.4066

TYR 187 ASP 188 -0.0002

ASP 188 PHE 189 -0.0794

PHE 189 ASP 190 0.0002

ASP 190 THR 191 -0.0287

THR 191 LYS 192 0.0001

LYS 192 THR 193 0.1915

THR 193 MET 194 0.0000

MET 194 LYS 195 0.2952

LYS 195 LYS 196 0.0002

LYS 196 ARG 197 0.3317

ARG 197 TYR 198 0.0000

TYR 198 TYR 199 0.2326

TYR 199 TYR 200 -0.0001

TYR 200 ILE 201 0.0483

ILE 201 VAL 202 0.0002

VAL 202 LYS 203 0.0927

LYS 203 ASN 204 -0.0000

ASN 204 SER 205 0.0427

SER 205 TRP 206 -0.0003

TRP 206 GLY 207 -0.0722

GLY 207 VAL 208 -0.0004

VAL 208 SER 209 0.0268

SER 209 TRP 210 -0.0004

TRP 210 GLY 211 0.0922

GLY 211 GLU 212 0.0002

GLU 212 LYS 213 0.1904

LYS 213 GLY 214 -0.0001

GLY 214 PHE 215 0.0730

PHE 215 ILE 216 -0.0002

ILE 216 ARG 217 0.1643

ARG 217 LEU 218 -0.0002

LEU 218 GLU 219 0.1838

GLU 219 THR 220 -0.0005

THR 220 ASP 221 0.0305

ASP 221 ILE 222 0.0002

ILE 222 ASN 223 -0.0046

ASN 223 GLY 224 -0.0002

GLY 224 TYR 225 -0.0626

TYR 225 ARG 226 -0.0001

ARG 226 LYS 227 -0.0626

LYS 227 PRO 228 -0.0003

PRO 228 CYS 229 -0.0264

CYS 229 SER 230 0.0001

SER 230 LEU 231 -0.1047

LEU 231 GLY 232 0.0004

GLY 232 THR 233 -0.0747

THR 233 GLU 234 -0.0004

GLU 234 ALA 235 0.0643

ALA 235 LEU 236 0.0003

LEU 236 VAL 237 -0.0363

VAL 237 ALA 238 0.0002

ALA 238 LEU 239 -0.0371

LEU 239 VAL 240 0.0002

VAL 240 ASP 241 0.0831

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 28 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *