Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 27 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0000

ASN 2 TYR 3 0.0942

TYR 3 GLU 4 0.0002

GLU 4 ASP 5 0.0206

ASP 5 VAL 6 -0.0002

VAL 6 ILE 7 -0.0155

ILE 7 ASP 8 0.0001

ASP 8 LYS 9 0.0546

LYS 9 TYR 10 -0.0004

TYR 10 LYS 11 0.1689

LYS 11 PRO 12 0.0002

PRO 12 LYS 13 -0.2687

LYS 13 ASP 14 0.0001

ASP 14 ALA 15 -0.0281

ALA 15 THR 16 0.0001

THR 16 PHE 17 -0.1030

PHE 17 ASP 18 -0.0002

ASP 18 HSP 19 0.1003

HSP 19 ALA 20 0.0001

ALA 20 SER 21 -0.1837

SER 21 TYR 22 -0.0002

TYR 22 ASP 23 0.1822

ASP 23 TRP 24 -0.0000

TRP 24 ARG 25 0.2185

ARG 25 LEU 26 0.0002

LEU 26 HSP 27 -0.1003

HSP 27 LYS 28 0.0001

LYS 28 GLY 29 0.2036

GLY 29 VAL 30 -0.0004

VAL 30 THR 31 0.0452

THR 31 PRO 32 0.0003

PRO 32 VAL 33 0.0513

VAL 33 LYS 34 -0.0002

LYS 34 ASP 35 0.0402

ASP 35 GLN 36 -0.0004

GLN 36 ALA 37 -0.0120

ALA 37 ASN 38 -0.0000

ASN 38 CYS 39 -0.0453

CYS 39 GLY 40 -0.0000

GLY 40 SER 41 -0.0441

SER 41 CYM 42 0.0000

CYM 42 TRP 43 -0.0076

TRP 43 ALA 44 0.0001

ALA 44 PHE 45 -0.0429

PHE 45 SER 46 -0.0001

SER 46 THR 47 -0.0335

THR 47 VAL 48 -0.0004

VAL 48 GLY 49 -0.0152

GLY 49 VAL 50 -0.0003

VAL 50 VAL 51 -0.0546

VAL 51 GLU 52 0.0001

GLU 52 SER 53 0.1537

SER 53 GLN 54 -0.0001

GLN 54 TYR 55 0.0583

TYR 55 ALA 56 -0.0002

ALA 56 ILE 57 0.3530

ILE 57 ARG 58 -0.0003

ARG 58 LYS 59 0.2271

LYS 59 ASN 60 0.0001

ASN 60 GLN 61 0.1439

GLN 61 LEU 62 0.0000

LEU 62 VAL 63 0.2405

VAL 63 SER 64 0.0003

SER 64 ILE 65 -0.0073

ILE 65 SER 66 0.0001

SER 66 GLU 67 0.0170

GLU 67 GLN 68 0.0001

GLN 68 GLN 69 -0.0437

GLN 69 MET 70 0.0000

MET 70 VAL 71 0.0606

VAL 71 ASP 72 0.0003

ASP 72 CYS 73 0.1094

CYS 73 SER 74 0.0001

SER 74 THR 75 -0.0249

THR 75 GLN 76 0.0005

GLN 76 ASN 77 0.0443

ASN 77 THR 78 -0.0001

THR 78 GLY 79 0.0298

GLY 79 CYS 80 -0.0000

CYS 80 TYR 81 0.0281

TYR 81 GLY 82 0.0000

GLY 82 GLY 83 -0.0555

GLY 83 PHE 84 -0.0001

PHE 84 ILE 85 -0.0534

ILE 85 PRO 86 0.0002

PRO 86 LEU 87 -0.1332

LEU 87 ALA 88 -0.0004

ALA 88 PHE 89 0.0037

PHE 89 GLU 90 0.0004

GLU 90 ASP 91 -0.0812

ASP 91 MET 92 -0.0003

MET 92 ILE 93 0.0055

ILE 93 GLU 94 -0.0001

GLU 94 MET 95 -0.1039

MET 95 GLY 96 0.0001

GLY 96 GLY 97 -0.0241

GLY 97 LEU 98 0.0001

LEU 98 CYS 99 -0.1032

CYS 99 SER 100 -0.0002

SER 100 SER 101 -0.0820

SER 101 GLU 102 -0.0002

GLU 102 ASP 103 0.0744

ASP 103 TYR 104 -0.0003

TYR 104 PRO 105 -0.0937

PRO 105 TYR 106 -0.0001

TYR 106 VAL 107 -0.0257

VAL 107 ALA 108 -0.0005

ALA 108 ASP 109 -0.2184

ASP 109 ILE 110 -0.0001

ILE 110 PRO 111 0.1876

PRO 111 GLU 112 -0.0001

GLU 112 MET 113 -0.0137

MET 113 CYS 114 -0.0002

CYS 114 LYS 115 -0.2367

LYS 115 PHE 116 -0.0001

PHE 116 ASP 117 0.0412

ASP 117 ILE 118 -0.0003

ILE 118 CYS 119 0.0911

CYS 119 GLU 120 0.0000

GLU 120 GLN 121 0.1265

GLN 121 LYS 122 0.0003

LYS 122 TYR 123 0.1117

TYR 123 LYS 124 -0.0001

LYS 124 ILE 125 -0.0120

ILE 125 ASN 126 -0.0003

ASN 126 ASN 127 0.0057

ASN 127 PHE 128 0.0003

PHE 128 LEU 129 -0.0405

LEU 129 GLU 130 -0.0002

GLU 130 ILE 131 0.0615

ILE 131 PRO 132 0.0002

PRO 132 GLU 133 -0.0306

GLU 133 ASP 134 0.0002

ASP 134 LYS 135 -0.1322

LYS 135 PHE 136 0.0002

PHE 136 LYS 137 0.0450

LYS 137 GLU 138 -0.0001

GLU 138 ALA 139 -0.0461

ALA 139 ILE 140 -0.0001

ILE 140 ARG 141 0.0341

ARG 141 PHE 142 0.0002

PHE 142 LEU 143 0.0447

LEU 143 GLY 144 -0.0003

GLY 144 PRO 145 0.1018

PRO 145 LEU 146 -0.0005

LEU 146 SER 147 -0.0453

SER 147 VAL 148 0.0002

VAL 148 SER 149 -0.0143

SER 149 ILE 150 -0.0000

ILE 150 ALA 151 0.0071

ALA 151 VAL 152 0.0004

VAL 152 SER 153 -0.0281

SER 153 ASP 154 0.0004

ASP 154 ASP 155 -0.0154

ASP 155 PHE 156 -0.0001

PHE 156 ALA 157 -0.0232

ALA 157 PHE 158 0.0004

PHE 158 TYR 159 0.0028

TYR 159 ARG 160 0.0001

ARG 160 GLY 161 -0.0157

GLY 161 GLY 162 0.0001

GLY 162 ILE 163 -0.0274

ILE 163 PHE 164 -0.0001

PHE 164 ASP 165 -0.0071

ASP 165 GLY 166 0.0002

GLY 166 GLU 167 -0.0490

GLU 167 CYS 168 -0.0001

CYS 168 GLY 169 -0.0014

GLY 169 GLU 170 -0.0004

GLU 170 ALA 171 0.0192

ALA 171 PRO 172 0.0002

PRO 172 ASN 173 -0.0882

ASN 173 HSP 174 -0.0001

HSP 174 ALA 175 0.0548

ALA 175 VAL 176 -0.0002

VAL 176 ILE 177 0.0215

ILE 177 LEU 178 0.0002

LEU 178 VAL 179 0.0244

VAL 179 GLY 180 -0.0003

GLY 180 PHE 181 -0.0153

PHE 181 GLY 182 -0.0002

GLY 182 ALA 183 0.0652

ALA 183 GLU 184 0.0002

GLU 184 ASP 185 0.1500

ASP 185 ALA 186 0.0001

ALA 186 TYR 187 0.3364

TYR 187 ASP 188 0.0002

ASP 188 PHE 189 0.0603

PHE 189 ASP 190 0.0000

ASP 190 THR 191 0.0440

THR 191 LYS 192 -0.0003

LYS 192 THR 193 -0.0663

THR 193 MET 194 -0.0000

MET 194 LYS 195 -0.1420

LYS 195 LYS 196 -0.0001

LYS 196 ARG 197 -0.1671

ARG 197 TYR 198 0.0001

TYR 198 TYR 199 -0.0564

TYR 199 TYR 200 0.0004

TYR 200 ILE 201 0.0220

ILE 201 VAL 202 0.0000

VAL 202 LYS 203 0.0026

LYS 203 ASN 204 0.0004

ASN 204 SER 205 -0.0038

SER 205 TRP 206 0.0003

TRP 206 GLY 207 -0.0256

GLY 207 VAL 208 0.0002

VAL 208 SER 209 -0.0402

SER 209 TRP 210 -0.0002

TRP 210 GLY 211 -0.0244

GLY 211 GLU 212 -0.0001

GLU 212 LYS 213 -0.0819

LYS 213 GLY 214 0.0000

GLY 214 PHE 215 0.0161

PHE 215 ILE 216 -0.0004

ILE 216 ARG 217 -0.0629

ARG 217 LEU 218 -0.0001

LEU 218 GLU 219 -0.0314

GLU 219 THR 220 -0.0004

THR 220 ASP 221 0.0100

ASP 221 ILE 222 0.0001

ILE 222 ASN 223 -0.0005

ASN 223 GLY 224 -0.0002

GLY 224 TYR 225 -0.3078

TYR 225 ARG 226 -0.0001

ARG 226 LYS 227 0.0649

LYS 227 PRO 228 -0.0001

PRO 228 CYS 229 -0.0811

CYS 229 SER 230 0.0002

SER 230 LEU 231 -0.1062

LEU 231 GLY 232 -0.0002

GLY 232 THR 233 -0.0348

THR 233 GLU 234 -0.0002

GLU 234 ALA 235 0.0519

ALA 235 LEU 236 0.0002

LEU 236 VAL 237 -0.0052

VAL 237 ALA 238 -0.0003

ALA 238 LEU 239 -0.0233

LEU 239 VAL 240 0.0001

VAL 240 ASP 241 0.0388

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 27 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *