Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 26 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0004

ASN 2 TYR 3 0.0156

TYR 3 GLU 4 -0.0001

GLU 4 ASP 5 0.0390

ASP 5 VAL 6 0.0002

VAL 6 ILE 7 -0.0271

ILE 7 ASP 8 0.0003

ASP 8 LYS 9 -0.0155

LYS 9 TYR 10 0.0001

TYR 10 LYS 11 0.0697

LYS 11 PRO 12 0.0001

PRO 12 LYS 13 -0.0112

LYS 13 ASP 14 -0.0003

ASP 14 ALA 15 -0.1011

ALA 15 THR 16 0.0003

THR 16 PHE 17 0.1327

PHE 17 ASP 18 0.0001

ASP 18 HSP 19 0.0300

HSP 19 ALA 20 -0.0003

ALA 20 SER 21 -0.0814

SER 21 TYR 22 -0.0002

TYR 22 ASP 23 -0.1336

ASP 23 TRP 24 0.0000

TRP 24 ARG 25 -0.1573

ARG 25 LEU 26 -0.0001

LEU 26 HSP 27 0.3412

HSP 27 LYS 28 -0.0001

LYS 28 GLY 29 -0.0533

GLY 29 VAL 30 0.0000

VAL 30 THR 31 0.0585

THR 31 PRO 32 -0.0001

PRO 32 VAL 33 -0.0289

VAL 33 LYS 34 -0.0001

LYS 34 ASP 35 0.2840

ASP 35 GLN 36 -0.0003

GLN 36 ALA 37 0.0668

ALA 37 ASN 38 0.0002

ASN 38 CYS 39 -0.0603

CYS 39 GLY 40 0.0001

GLY 40 SER 41 0.0182

SER 41 CYM 42 -0.0000

CYM 42 TRP 43 0.0329

TRP 43 ALA 44 -0.0001

ALA 44 PHE 45 -0.0476

PHE 45 SER 46 -0.0000

SER 46 THR 47 0.0057

THR 47 VAL 48 0.0003

VAL 48 GLY 49 -0.0432

GLY 49 VAL 50 0.0001

VAL 50 VAL 51 -0.0789

VAL 51 GLU 52 -0.0002

GLU 52 SER 53 -0.0173

SER 53 GLN 54 -0.0001

GLN 54 TYR 55 -0.0958

TYR 55 ALA 56 -0.0002

ALA 56 ILE 57 -0.0031

ILE 57 ARG 58 -0.0003

ARG 58 LYS 59 -0.1659

LYS 59 ASN 60 0.0002

ASN 60 GLN 61 -0.0490

GLN 61 LEU 62 0.0001

LEU 62 VAL 63 0.5299

VAL 63 SER 64 -0.0001

SER 64 ILE 65 0.1053

ILE 65 SER 66 0.0001

SER 66 GLU 67 0.1363

GLU 67 GLN 68 0.0004

GLN 68 GLN 69 0.0182

GLN 69 MET 70 -0.0003

MET 70 VAL 71 0.0305

VAL 71 ASP 72 0.0002

ASP 72 CYS 73 -0.0664

CYS 73 SER 74 -0.0001

SER 74 THR 75 0.0386

THR 75 GLN 76 0.0001

GLN 76 ASN 77 -0.0111

ASN 77 THR 78 0.0001

THR 78 GLY 79 -0.0813

GLY 79 CYS 80 0.0002

CYS 80 TYR 81 -0.0080

TYR 81 GLY 82 -0.0001

GLY 82 GLY 83 -0.0525

GLY 83 PHE 84 -0.0001

PHE 84 ILE 85 -0.0612

ILE 85 PRO 86 -0.0002

PRO 86 LEU 87 -0.0590

LEU 87 ALA 88 -0.0003

ALA 88 PHE 89 -0.0227

PHE 89 GLU 90 -0.0000

GLU 90 ASP 91 -0.0816

ASP 91 MET 92 0.0003

MET 92 ILE 93 -0.0081

ILE 93 GLU 94 -0.0000

GLU 94 MET 95 -0.0277

MET 95 GLY 96 -0.0001

GLY 96 GLY 97 -0.0023

GLY 97 LEU 98 0.0003

LEU 98 CYS 99 -0.0143

CYS 99 SER 100 -0.0001

SER 100 SER 101 -0.0663

SER 101 GLU 102 0.0000

GLU 102 ASP 103 0.0295

ASP 103 TYR 104 -0.0001

TYR 104 PRO 105 -0.1196

PRO 105 TYR 106 0.0003

TYR 106 VAL 107 -0.0742

VAL 107 ALA 108 0.0002

ALA 108 ASP 109 0.0946

ASP 109 ILE 110 -0.0000

ILE 110 PRO 111 -0.0542

PRO 111 GLU 112 0.0001

GLU 112 MET 113 0.0992

MET 113 CYS 114 0.0003

CYS 114 LYS 115 0.0139

LYS 115 PHE 116 -0.0001

PHE 116 ASP 117 0.0495

ASP 117 ILE 118 0.0001

ILE 118 CYS 119 0.0696

CYS 119 GLU 120 -0.0003

GLU 120 GLN 121 -0.0682

GLN 121 LYS 122 0.0004

LYS 122 TYR 123 -0.1781

TYR 123 LYS 124 -0.0001

LYS 124 ILE 125 -0.2113

ILE 125 ASN 126 0.0002

ASN 126 ASN 127 -0.1032

ASN 127 PHE 128 0.0002

PHE 128 LEU 129 -0.1375

LEU 129 GLU 130 -0.0001

GLU 130 ILE 131 -0.0881

ILE 131 PRO 132 0.0001

PRO 132 GLU 133 0.0175

GLU 133 ASP 134 -0.0002

ASP 134 LYS 135 -0.0951

LYS 135 PHE 136 0.0002

PHE 136 LYS 137 0.0188

LYS 137 GLU 138 -0.0000

GLU 138 ALA 139 -0.1185

ALA 139 ILE 140 -0.0001

ILE 140 ARG 141 0.0993

ARG 141 PHE 142 -0.0002

PHE 142 LEU 143 0.0022

LEU 143 GLY 144 -0.0000

GLY 144 PRO 145 0.0674

PRO 145 LEU 146 0.0003

LEU 146 SER 147 0.0373

SER 147 VAL 148 0.0000

VAL 148 SER 149 0.1302

SER 149 ILE 150 0.0001

ILE 150 ALA 151 0.0389

ALA 151 VAL 152 0.0000

VAL 152 SER 153 -0.0255

SER 153 ASP 154 0.0002

ASP 154 ASP 155 -0.0623

ASP 155 PHE 156 0.0002

PHE 156 ALA 157 0.0467

ALA 157 PHE 158 0.0002

PHE 158 TYR 159 -0.0060

TYR 159 ARG 160 -0.0003

ARG 160 GLY 161 0.0971

GLY 161 GLY 162 -0.0002

GLY 162 ILE 163 0.0974

ILE 163 PHE 164 0.0000

PHE 164 ASP 165 -0.0440

ASP 165 GLY 166 -0.0000

GLY 166 GLU 167 -0.1542

GLU 167 CYS 168 -0.0001

CYS 168 GLY 169 -0.1487

GLY 169 GLU 170 0.0002

GLU 170 ALA 171 0.1296

ALA 171 PRO 172 -0.0000

PRO 172 ASN 173 0.0261

ASN 173 HSP 174 -0.0001

HSP 174 ALA 175 0.1340

ALA 175 VAL 176 0.0003

VAL 176 ILE 177 0.0501

ILE 177 LEU 178 -0.0004

LEU 178 VAL 179 0.0226

VAL 179 GLY 180 0.0004

GLY 180 PHE 181 0.1188

PHE 181 GLY 182 0.0001

GLY 182 ALA 183 0.2515

ALA 183 GLU 184 -0.0001

GLU 184 ASP 185 0.1182

ASP 185 ALA 186 -0.0004

ALA 186 TYR 187 0.1502

TYR 187 ASP 188 0.0000

ASP 188 PHE 189 0.0605

PHE 189 ASP 190 -0.0003

ASP 190 THR 191 -0.0650

THR 191 LYS 192 -0.0003

LYS 192 THR 193 -0.0861

THR 193 MET 194 0.0002

MET 194 LYS 195 -0.0027

LYS 195 LYS 196 -0.0002

LYS 196 ARG 197 -0.0624

ARG 197 TYR 198 0.0003

TYR 198 TYR 199 0.1276

TYR 199 TYR 200 -0.0002

TYR 200 ILE 201 0.0324

ILE 201 VAL 202 0.0002

VAL 202 LYS 203 0.0751

LYS 203 ASN 204 0.0002

ASN 204 SER 205 0.0397

SER 205 TRP 206 0.0001

TRP 206 GLY 207 -0.0823

GLY 207 VAL 208 -0.0001

VAL 208 SER 209 0.0576

SER 209 TRP 210 0.0001

TRP 210 GLY 211 0.1322

GLY 211 GLU 212 -0.0002

GLU 212 LYS 213 -0.0635

LYS 213 GLY 214 -0.0005

GLY 214 PHE 215 0.0923

PHE 215 ILE 216 -0.0002

ILE 216 ARG 217 0.1055

ARG 217 LEU 218 0.0001

LEU 218 GLU 219 0.0703

GLU 219 THR 220 -0.0002

THR 220 ASP 221 0.1574

ASP 221 ILE 222 -0.0001

ILE 222 ASN 223 0.0570

ASN 223 GLY 224 -0.0003

GLY 224 TYR 225 -0.2290

TYR 225 ARG 226 -0.0002

ARG 226 LYS 227 0.0805

LYS 227 PRO 228 0.0001

PRO 228 CYS 229 0.0909

CYS 229 SER 230 0.0001

SER 230 LEU 231 0.0596

LEU 231 GLY 232 0.0002

GLY 232 THR 233 -0.0085

THR 233 GLU 234 0.0002

GLU 234 ALA 235 -0.0365

ALA 235 LEU 236 -0.0001

LEU 236 VAL 237 0.0635

VAL 237 ALA 238 0.0000

ALA 238 LEU 239 0.0689

LEU 239 VAL 240 0.0000

VAL 240 ASP 241 -0.0902

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 26 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *