Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 25 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 0.0002

ASN 2 TYR 3 -0.0003

TYR 3 GLU 4 -0.0002

GLU 4 ASP 5 -0.0008

ASP 5 VAL 6 -0.0001

VAL 6 ILE 7 -0.0001

ILE 7 ASP 8 0.0001

ASP 8 LYS 9 0.0159

LYS 9 TYR 10 -0.0005

TYR 10 LYS 11 0.2225

LYS 11 PRO 12 0.0003

PRO 12 LYS 13 -0.1820

LYS 13 ASP 14 -0.0002

ASP 14 ALA 15 -0.1124

ALA 15 THR 16 0.0000

THR 16 PHE 17 -0.1401

PHE 17 ASP 18 0.0002

ASP 18 HSP 19 0.1580

HSP 19 ALA 20 -0.0000

ALA 20 SER 21 -0.1073

SER 21 TYR 22 0.0001

TYR 22 ASP 23 -0.0412

ASP 23 TRP 24 0.0000

TRP 24 ARG 25 0.0455

ARG 25 LEU 26 -0.0001

LEU 26 HSP 27 -0.2867

HSP 27 LYS 28 -0.0003

LYS 28 GLY 29 0.4959

GLY 29 VAL 30 -0.0000

VAL 30 THR 31 0.0931

THR 31 PRO 32 0.0000

PRO 32 VAL 33 0.0973

VAL 33 LYS 34 -0.0000

LYS 34 ASP 35 -0.0708

ASP 35 GLN 36 -0.0000

GLN 36 ALA 37 -0.1377

ALA 37 ASN 38 0.0001

ASN 38 CYS 39 -0.1587

CYS 39 GLY 40 -0.0004

GLY 40 SER 41 0.0096

SER 41 CYM 42 -0.0004

CYM 42 TRP 43 -0.0206

TRP 43 ALA 44 -0.0002

ALA 44 PHE 45 0.0085

PHE 45 SER 46 -0.0002

SER 46 THR 47 0.0403

THR 47 VAL 48 0.0000

VAL 48 GLY 49 0.0556

GLY 49 VAL 50 0.0002

VAL 50 VAL 51 0.0552

VAL 51 GLU 52 -0.0001

GLU 52 SER 53 0.0694

SER 53 GLN 54 -0.0003

GLN 54 TYR 55 0.0026

TYR 55 ALA 56 -0.0002

ALA 56 ILE 57 0.0648

ILE 57 ARG 58 -0.0003

ARG 58 LYS 59 0.0456

LYS 59 ASN 60 0.0001

ASN 60 GLN 61 0.1208

GLN 61 LEU 62 -0.0002

LEU 62 VAL 63 -0.3168

VAL 63 SER 64 -0.0001

SER 64 ILE 65 -0.1363

ILE 65 SER 66 0.0000

SER 66 GLU 67 0.0864

GLU 67 GLN 68 -0.0002

GLN 68 GLN 69 0.0964

GLN 69 MET 70 0.0002

MET 70 VAL 71 -0.0637

VAL 71 ASP 72 -0.0001

ASP 72 CYS 73 -0.1267

CYS 73 SER 74 -0.0003

SER 74 THR 75 -0.0546

THR 75 GLN 76 -0.0004

GLN 76 ASN 77 -0.0119

ASN 77 THR 78 0.0001

THR 78 GLY 79 -0.1502

GLY 79 CYS 80 0.0001

CYS 80 TYR 81 -0.0834

TYR 81 GLY 82 -0.0001

GLY 82 GLY 83 -0.0477

GLY 83 PHE 84 0.0002

PHE 84 ILE 85 0.0032

ILE 85 PRO 86 0.0001

PRO 86 LEU 87 -0.0052

LEU 87 ALA 88 -0.0002

ALA 88 PHE 89 -0.0177

PHE 89 GLU 90 0.0000

GLU 90 ASP 91 -0.0495

ASP 91 MET 92 0.0002

MET 92 ILE 93 0.0182

ILE 93 GLU 94 -0.0002

GLU 94 MET 95 -0.0638

MET 95 GLY 96 -0.0003

GLY 96 GLY 97 0.0260

GLY 97 LEU 98 0.0003

LEU 98 CYS 99 -0.0593

CYS 99 SER 100 0.0002

SER 100 SER 101 0.0269

SER 101 GLU 102 0.0001

GLU 102 ASP 103 0.0042

ASP 103 TYR 104 -0.0002

TYR 104 PRO 105 0.1885

PRO 105 TYR 106 0.0004

TYR 106 VAL 107 0.0522

VAL 107 ALA 108 0.0003

ALA 108 ASP 109 0.1391

ASP 109 ILE 110 -0.0001

ILE 110 PRO 111 -0.1249

PRO 111 GLU 112 -0.0001

GLU 112 MET 113 -0.0044

MET 113 CYS 114 -0.0001

CYS 114 LYS 115 -0.0358

LYS 115 PHE 116 0.0004

PHE 116 ASP 117 -0.0053

ASP 117 ILE 118 0.0001

ILE 118 CYS 119 0.0903

CYS 119 GLU 120 -0.0002

GLU 120 GLN 121 0.0077

GLN 121 LYS 122 0.0001

LYS 122 TYR 123 -0.0009

TYR 123 LYS 124 0.0003

LYS 124 ILE 125 -0.0228

ILE 125 ASN 126 -0.0003

ASN 126 ASN 127 -0.0707

ASN 127 PHE 128 -0.0002

PHE 128 LEU 129 -0.0368

LEU 129 GLU 130 -0.0001

GLU 130 ILE 131 0.0171

ILE 131 PRO 132 -0.0002

PRO 132 GLU 133 0.0350

GLU 133 ASP 134 -0.0003

ASP 134 LYS 135 0.0484

LYS 135 PHE 136 0.0001

PHE 136 LYS 137 0.0197

LYS 137 GLU 138 -0.0002

GLU 138 ALA 139 -0.0377

ALA 139 ILE 140 -0.0000

ILE 140 ARG 141 0.0391

ARG 141 PHE 142 0.0002

PHE 142 LEU 143 0.0423

LEU 143 GLY 144 0.0002

GLY 144 PRO 145 0.0272

PRO 145 LEU 146 -0.0002

LEU 146 SER 147 -0.0130

SER 147 VAL 148 -0.0002

VAL 148 SER 149 -0.0506

SER 149 ILE 150 -0.0003

ILE 150 ALA 151 -0.0224

ALA 151 VAL 152 -0.0002

VAL 152 SER 153 -0.0552

SER 153 ASP 154 0.0003

ASP 154 ASP 155 -0.0218

ASP 155 PHE 156 -0.0002

PHE 156 ALA 157 0.0087

ALA 157 PHE 158 -0.0000

PHE 158 TYR 159 0.0245

TYR 159 ARG 160 -0.0000

ARG 160 GLY 161 0.0296

GLY 161 GLY 162 -0.0001

GLY 162 ILE 163 -0.0205

ILE 163 PHE 164 -0.0003

PHE 164 ASP 165 0.0065

ASP 165 GLY 166 0.0003

GLY 166 GLU 167 0.0805

GLU 167 CYS 168 -0.0002

CYS 168 GLY 169 0.0342

GLY 169 GLU 170 0.0000

GLU 170 ALA 171 -0.0109

ALA 171 PRO 172 -0.0004

PRO 172 ASN 173 0.0030

ASN 173 HSP 174 -0.0001

HSP 174 ALA 175 0.0101

ALA 175 VAL 176 -0.0003

VAL 176 ILE 177 0.0184

ILE 177 LEU 178 0.0001

LEU 178 VAL 179 -0.0052

VAL 179 GLY 180 -0.0004

GLY 180 PHE 181 0.1016

PHE 181 GLY 182 -0.0000

GLY 182 ALA 183 0.1409

ALA 183 GLU 184 -0.0002

GLU 184 ASP 185 0.1229

ASP 185 ALA 186 0.0001

ALA 186 TYR 187 0.0248

TYR 187 ASP 188 -0.0002

ASP 188 PHE 189 0.0174

PHE 189 ASP 190 -0.0001

ASP 190 THR 191 -0.0313

THR 191 LYS 192 0.0001

LYS 192 THR 193 0.0280

THR 193 MET 194 -0.0002

MET 194 LYS 195 0.0722

LYS 195 LYS 196 0.0004

LYS 196 ARG 197 0.0219

ARG 197 TYR 198 -0.0002

TYR 198 TYR 199 0.1200

TYR 199 TYR 200 0.0000

TYR 200 ILE 201 0.0620

ILE 201 VAL 202 0.0000

VAL 202 LYS 203 0.0908

LYS 203 ASN 204 0.0001

ASN 204 SER 205 0.0263

SER 205 TRP 206 0.0000

TRP 206 GLY 207 -0.0432

GLY 207 VAL 208 -0.0002

VAL 208 SER 209 0.0317

SER 209 TRP 210 -0.0002

TRP 210 GLY 211 0.0438

GLY 211 GLU 212 -0.0001

GLU 212 LYS 213 0.0524

LYS 213 GLY 214 -0.0003

GLY 214 PHE 215 0.0303

PHE 215 ILE 216 -0.0004

ILE 216 ARG 217 0.0596

ARG 217 LEU 218 0.0003

LEU 218 GLU 219 0.0703

GLU 219 THR 220 -0.0001

THR 220 ASP 221 0.0507

ASP 221 ILE 222 0.0003

ILE 222 ASN 223 0.0476

ASN 223 GLY 224 0.0000

GLY 224 TYR 225 0.1955

TYR 225 ARG 226 0.0001

ARG 226 LYS 227 -0.0327

LYS 227 PRO 228 -0.0001

PRO 228 CYS 229 0.1065

CYS 229 SER 230 0.0001

SER 230 LEU 231 -0.0337

LEU 231 GLY 232 -0.0006

GLY 232 THR 233 -0.0538

THR 233 GLU 234 0.0002

GLU 234 ALA 235 0.0254

ALA 235 LEU 236 0.0002

LEU 236 VAL 237 0.0015

VAL 237 ALA 238 0.0001

ALA 238 LEU 239 0.0027

LEU 239 VAL 240 0.0002

VAL 240 ASP 241 0.0540

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 25 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *