Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 24 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0003

ASN 2 TYR 3 -0.0823

TYR 3 GLU 4 -0.0002

GLU 4 ASP 5 -0.0669

ASP 5 VAL 6 0.0003

VAL 6 ILE 7 0.0102

ILE 7 ASP 8 -0.0003

ASP 8 LYS 9 -0.0291

LYS 9 TYR 10 0.0002

TYR 10 LYS 11 -0.0359

LYS 11 PRO 12 -0.0001

PRO 12 LYS 13 -0.0550

LYS 13 ASP 14 -0.0001

ASP 14 ALA 15 0.0133

ALA 15 THR 16 -0.0000

THR 16 PHE 17 -0.1146

PHE 17 ASP 18 0.0002

ASP 18 HSP 19 0.0507

HSP 19 ALA 20 0.0000

ALA 20 SER 21 0.0482

SER 21 TYR 22 0.0001

TYR 22 ASP 23 0.0440

ASP 23 TRP 24 0.0002

TRP 24 ARG 25 0.0410

ARG 25 LEU 26 0.0002

LEU 26 HSP 27 -0.1887

HSP 27 LYS 28 0.0005

LYS 28 GLY 29 0.2132

GLY 29 VAL 30 0.0001

VAL 30 THR 31 0.0099

THR 31 PRO 32 0.0000

PRO 32 VAL 33 0.0249

VAL 33 LYS 34 0.0003

LYS 34 ASP 35 -0.0176

ASP 35 GLN 36 -0.0001

GLN 36 ALA 37 -0.0828

ALA 37 ASN 38 0.0000

ASN 38 CYS 39 -0.0563

CYS 39 GLY 40 0.0000

GLY 40 SER 41 0.0389

SER 41 CYM 42 -0.0000

CYM 42 TRP 43 0.0348

TRP 43 ALA 44 0.0004

ALA 44 PHE 45 0.0134

PHE 45 SER 46 0.0002

SER 46 THR 47 0.0426

THR 47 VAL 48 -0.0001

VAL 48 GLY 49 -0.0370

GLY 49 VAL 50 -0.0002

VAL 50 VAL 51 -0.0539

VAL 51 GLU 52 -0.0002

GLU 52 SER 53 -0.1212

SER 53 GLN 54 0.0000

GLN 54 TYR 55 -0.1180

TYR 55 ALA 56 -0.0003

ALA 56 ILE 57 -0.1562

ILE 57 ARG 58 -0.0001

ARG 58 LYS 59 -0.0932

LYS 59 ASN 60 -0.0003

ASN 60 GLN 61 0.0015

GLN 61 LEU 62 0.0002

LEU 62 VAL 63 -0.4592

VAL 63 SER 64 -0.0004

SER 64 ILE 65 -0.0546

ILE 65 SER 66 -0.0002

SER 66 GLU 67 -0.0226

GLU 67 GLN 68 -0.0003

GLN 68 GLN 69 -0.0101

GLN 69 MET 70 0.0002

MET 70 VAL 71 -0.0108

VAL 71 ASP 72 0.0001

ASP 72 CYS 73 -0.0819

CYS 73 SER 74 0.0002

SER 74 THR 75 0.0329

THR 75 GLN 76 -0.0002

GLN 76 ASN 77 -0.0461

ASN 77 THR 78 0.0000

THR 78 GLY 79 -0.0777

GLY 79 CYS 80 -0.0002

CYS 80 TYR 81 -0.0427

TYR 81 GLY 82 -0.0001

GLY 82 GLY 83 -0.0320

GLY 83 PHE 84 0.0003

PHE 84 ILE 85 0.0116

ILE 85 PRO 86 -0.0003

PRO 86 LEU 87 0.0250

LEU 87 ALA 88 0.0000

ALA 88 PHE 89 -0.0011

PHE 89 GLU 90 0.0005

GLU 90 ASP 91 0.0243

ASP 91 MET 92 -0.0003

MET 92 ILE 93 -0.0045

ILE 93 GLU 94 -0.0000

GLU 94 MET 95 0.0708

MET 95 GLY 96 -0.0002

GLY 96 GLY 97 -0.0005

GLY 97 LEU 98 0.0001

LEU 98 CYS 99 0.0683

CYS 99 SER 100 -0.0001

SER 100 SER 101 0.0614

SER 101 GLU 102 0.0002

GLU 102 ASP 103 -0.0834

ASP 103 TYR 104 -0.0002

TYR 104 PRO 105 0.0874

PRO 105 TYR 106 0.0005

TYR 106 VAL 107 0.0176

VAL 107 ALA 108 -0.0001

ALA 108 ASP 109 0.2012

ASP 109 ILE 110 -0.0002

ILE 110 PRO 111 -0.1340

PRO 111 GLU 112 -0.0001

GLU 112 MET 113 0.0221

MET 113 CYS 114 -0.0001

CYS 114 LYS 115 0.1358

LYS 115 PHE 116 0.0000

PHE 116 ASP 117 -0.0202

ASP 117 ILE 118 0.0001

ILE 118 CYS 119 -0.0568

CYS 119 GLU 120 -0.0002

GLU 120 GLN 121 -0.0855

GLN 121 LYS 122 -0.0000

LYS 122 TYR 123 -0.0781

TYR 123 LYS 124 0.0000

LYS 124 ILE 125 0.0197

ILE 125 ASN 126 -0.0002

ASN 126 ASN 127 0.0150

ASN 127 PHE 128 -0.0001

PHE 128 LEU 129 -0.0249

LEU 129 GLU 130 -0.0000

GLU 130 ILE 131 -0.0661

ILE 131 PRO 132 0.0005

PRO 132 GLU 133 -0.2294

GLU 133 ASP 134 0.0002

ASP 134 LYS 135 -0.2499

LYS 135 PHE 136 0.0001

PHE 136 LYS 137 0.0203

LYS 137 GLU 138 -0.0001

GLU 138 ALA 139 -0.0626

ALA 139 ILE 140 -0.0001

ILE 140 ARG 141 -0.0140

ARG 141 PHE 142 -0.0000

PHE 142 LEU 143 -0.0240

LEU 143 GLY 144 -0.0002

GLY 144 PRO 145 0.0093

PRO 145 LEU 146 -0.0000

LEU 146 SER 147 0.0078

SER 147 VAL 148 0.0001

VAL 148 SER 149 0.0511

SER 149 ILE 150 0.0001

ILE 150 ALA 151 -0.0030

ALA 151 VAL 152 -0.0001

VAL 152 SER 153 -0.0054

SER 153 ASP 154 0.0001

ASP 154 ASP 155 -0.0335

ASP 155 PHE 156 -0.0000

PHE 156 ALA 157 0.0400

ALA 157 PHE 158 0.0002

PHE 158 TYR 159 -0.0464

TYR 159 ARG 160 -0.0003

ARG 160 GLY 161 0.0100

GLY 161 GLY 162 0.0003

GLY 162 ILE 163 0.0851

ILE 163 PHE 164 -0.0001

PHE 164 ASP 165 0.0167

ASP 165 GLY 166 -0.0004

GLY 166 GLU 167 -0.1167

GLU 167 CYS 168 0.0000

CYS 168 GLY 169 -0.0403

GLY 169 GLU 170 -0.0000

GLU 170 ALA 171 -0.0100

ALA 171 PRO 172 -0.0004

PRO 172 ASN 173 -0.0673

ASN 173 HSP 174 -0.0004

HSP 174 ALA 175 0.0452

ALA 175 VAL 176 0.0001

VAL 176 ILE 177 0.0226

ILE 177 LEU 178 -0.0002

LEU 178 VAL 179 0.0026

VAL 179 GLY 180 0.0000

GLY 180 PHE 181 0.0205

PHE 181 GLY 182 0.0002

GLY 182 ALA 183 -0.0254

ALA 183 GLU 184 -0.0001

GLU 184 ASP 185 -0.1517

ASP 185 ALA 186 -0.0003

ALA 186 TYR 187 -0.0986

TYR 187 ASP 188 0.0002

ASP 188 PHE 189 -0.0263

PHE 189 ASP 190 0.0003

ASP 190 THR 191 0.0183

THR 191 LYS 192 0.0001

LYS 192 THR 193 -0.0007

THR 193 MET 194 -0.0002

MET 194 LYS 195 -0.0207

LYS 195 LYS 196 -0.0002

LYS 196 ARG 197 0.0182

ARG 197 TYR 198 0.0003

TYR 198 TYR 199 -0.0087

TYR 199 TYR 200 -0.0003

TYR 200 ILE 201 0.0156

ILE 201 VAL 202 -0.0000

VAL 202 LYS 203 0.0024

LYS 203 ASN 204 0.0002

ASN 204 SER 205 -0.0234

SER 205 TRP 206 -0.0004

TRP 206 GLY 207 0.0175

GLY 207 VAL 208 0.0001

VAL 208 SER 209 0.0718

SER 209 TRP 210 0.0001

TRP 210 GLY 211 0.0522

GLY 211 GLU 212 0.0002

GLU 212 LYS 213 0.0753

LYS 213 GLY 214 -0.0003

GLY 214 PHE 215 0.0250

PHE 215 ILE 216 0.0003

ILE 216 ARG 217 0.0619

ARG 217 LEU 218 -0.0001

LEU 218 GLU 219 0.0648

GLU 219 THR 220 -0.0000

THR 220 ASP 221 0.0340

ASP 221 ILE 222 0.0003

ILE 222 ASN 223 -0.0165

ASN 223 GLY 224 0.0000

GLY 224 TYR 225 -0.5026

TYR 225 ARG 226 0.0002

ARG 226 LYS 227 0.0592

LYS 227 PRO 228 0.0001

PRO 228 CYS 229 -0.0437

CYS 229 SER 230 0.0001

SER 230 LEU 231 -0.1247

LEU 231 GLY 232 -0.0001

GLY 232 THR 233 0.0336

THR 233 GLU 234 -0.0004

GLU 234 ALA 235 -0.0114

ALA 235 LEU 236 0.0001

LEU 236 VAL 237 -0.0479

VAL 237 ALA 238 -0.0003

ALA 238 LEU 239 0.0031

LEU 239 VAL 240 -0.0004

VAL 240 ASP 241 0.0332

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 24 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *