Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 22 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 0.0002

ASN 2 TYR 3 -0.0087

TYR 3 GLU 4 -0.0003

GLU 4 ASP 5 -0.0077

ASP 5 VAL 6 -0.0001

VAL 6 ILE 7 0.0432

ILE 7 ASP 8 -0.0001

ASP 8 LYS 9 0.0554

LYS 9 TYR 10 -0.0002

TYR 10 LYS 11 0.4437

LYS 11 PRO 12 -0.0002

PRO 12 LYS 13 -0.0081

LYS 13 ASP 14 -0.0002

ASP 14 ALA 15 -0.0994

ALA 15 THR 16 0.0001

THR 16 PHE 17 0.0147

PHE 17 ASP 18 -0.0002

ASP 18 HSP 19 0.0118

HSP 19 ALA 20 -0.0001

ALA 20 SER 21 -0.2847

SER 21 TYR 22 -0.0001

TYR 22 ASP 23 -0.3112

ASP 23 TRP 24 0.0002

TRP 24 ARG 25 -0.1801

ARG 25 LEU 26 -0.0002

LEU 26 HSP 27 -0.0034

HSP 27 LYS 28 -0.0003

LYS 28 GLY 29 0.1689

GLY 29 VAL 30 0.0003

VAL 30 THR 31 0.0499

THR 31 PRO 32 0.0001

PRO 32 VAL 33 0.1058

VAL 33 LYS 34 0.0002

LYS 34 ASP 35 0.0658

ASP 35 GLN 36 -0.0000

GLN 36 ALA 37 0.0046

ALA 37 ASN 38 0.0002

ASN 38 CYS 39 0.0023

CYS 39 GLY 40 -0.0000

GLY 40 SER 41 -0.0000

SER 41 CYM 42 -0.0001

CYM 42 TRP 43 -0.0085

TRP 43 ALA 44 0.0000

ALA 44 PHE 45 -0.0160

PHE 45 SER 46 0.0000

SER 46 THR 47 -0.0121

THR 47 VAL 48 -0.0000

VAL 48 GLY 49 -0.0371

GLY 49 VAL 50 -0.0003

VAL 50 VAL 51 -0.0428

VAL 51 GLU 52 -0.0003

GLU 52 SER 53 -0.0372

SER 53 GLN 54 0.0001

GLN 54 TYR 55 -0.0688

TYR 55 ALA 56 0.0002

ALA 56 ILE 57 -0.1282

ILE 57 ARG 58 0.0000

ARG 58 LYS 59 -0.0486

LYS 59 ASN 60 -0.0001

ASN 60 GLN 61 0.0265

GLN 61 LEU 62 -0.0004

LEU 62 VAL 63 0.0886

VAL 63 SER 64 -0.0000

SER 64 ILE 65 0.0370

ILE 65 SER 66 0.0001

SER 66 GLU 67 -0.0402

GLU 67 GLN 68 0.0001

GLN 68 GLN 69 -0.0403

GLN 69 MET 70 -0.0000

MET 70 VAL 71 0.0471

VAL 71 ASP 72 0.0002

ASP 72 CYS 73 0.0242

CYS 73 SER 74 0.0001

SER 74 THR 75 0.0068

THR 75 GLN 76 0.0001

GLN 76 ASN 77 -0.0273

ASN 77 THR 78 -0.0001

THR 78 GLY 79 0.0483

GLY 79 CYS 80 -0.0001

CYS 80 TYR 81 0.0433

TYR 81 GLY 82 0.0001

GLY 82 GLY 83 0.0354

GLY 83 PHE 84 0.0003

PHE 84 ILE 85 0.0521

ILE 85 PRO 86 0.0000

PRO 86 LEU 87 0.0690

LEU 87 ALA 88 -0.0000

ALA 88 PHE 89 0.0565

PHE 89 GLU 90 -0.0003

GLU 90 ASP 91 0.0554

ASP 91 MET 92 0.0002

MET 92 ILE 93 -0.0145

ILE 93 GLU 94 0.0001

GLU 94 MET 95 0.0434

MET 95 GLY 96 0.0002

GLY 96 GLY 97 -0.0169

GLY 97 LEU 98 0.0001

LEU 98 CYS 99 0.0440

CYS 99 SER 100 0.0000

SER 100 SER 101 0.0194

SER 101 GLU 102 -0.0002

GLU 102 ASP 103 -0.0281

ASP 103 TYR 104 -0.0001

TYR 104 PRO 105 0.0113

PRO 105 TYR 106 -0.0001

TYR 106 VAL 107 0.0497

VAL 107 ALA 108 0.0001

ALA 108 ASP 109 -0.0944

ASP 109 ILE 110 0.0003

ILE 110 PRO 111 0.0714

PRO 111 GLU 112 -0.0002

GLU 112 MET 113 -0.0726

MET 113 CYS 114 0.0000

CYS 114 LYS 115 0.0793

LYS 115 PHE 116 -0.0003

PHE 116 ASP 117 -0.0186

ASP 117 ILE 118 0.0001

ILE 118 CYS 119 -0.0856

CYS 119 GLU 120 0.0001

GLU 120 GLN 121 -0.0216

GLN 121 LYS 122 0.0002

LYS 122 TYR 123 0.0200

TYR 123 LYS 124 -0.0001

LYS 124 ILE 125 0.0619

ILE 125 ASN 126 0.0003

ASN 126 ASN 127 0.0066

ASN 127 PHE 128 0.0003

PHE 128 LEU 129 0.0450

LEU 129 GLU 130 -0.0001

GLU 130 ILE 131 -0.0192

ILE 131 PRO 132 0.0002

PRO 132 GLU 133 -0.0092

GLU 133 ASP 134 -0.0002

ASP 134 LYS 135 -0.0146

LYS 135 PHE 136 0.0002

PHE 136 LYS 137 0.0066

LYS 137 GLU 138 0.0003

GLU 138 ALA 139 0.0036

ALA 139 ILE 140 -0.0002

ILE 140 ARG 141 0.0923

ARG 141 PHE 142 -0.0001

PHE 142 LEU 143 0.1325

LEU 143 GLY 144 0.0003

GLY 144 PRO 145 0.0790

PRO 145 LEU 146 0.0000

LEU 146 SER 147 0.0764

SER 147 VAL 148 0.0000

VAL 148 SER 149 0.0359

SER 149 ILE 150 0.0000

ILE 150 ALA 151 0.0073

ALA 151 VAL 152 -0.0001

VAL 152 SER 153 0.0121

SER 153 ASP 154 -0.0003

ASP 154 ASP 155 0.0004

ASP 155 PHE 156 -0.0002

PHE 156 ALA 157 0.0032

ALA 157 PHE 158 -0.0000

PHE 158 TYR 159 -0.0118

TYR 159 ARG 160 -0.0001

ARG 160 GLY 161 -0.0256

GLY 161 GLY 162 0.0001

GLY 162 ILE 163 -0.0116

ILE 163 PHE 164 -0.0003

PHE 164 ASP 165 0.0020

ASP 165 GLY 166 -0.0001

GLY 166 GLU 167 -0.0123

GLU 167 CYS 168 0.0003

CYS 168 GLY 169 -0.0009

GLY 169 GLU 170 -0.0001

GLU 170 ALA 171 -0.0003

ALA 171 PRO 172 0.0003

PRO 172 ASN 173 0.0151

ASN 173 HSP 174 0.0005

HSP 174 ALA 175 0.0099

ALA 175 VAL 176 -0.0003

VAL 176 ILE 177 0.0394

ILE 177 LEU 178 0.0004

LEU 178 VAL 179 -0.0080

VAL 179 GLY 180 0.0001

GLY 180 PHE 181 0.0009

PHE 181 GLY 182 0.0001

GLY 182 ALA 183 0.0473

ALA 183 GLU 184 -0.0000

GLU 184 ASP 185 0.0121

ASP 185 ALA 186 -0.0001

ALA 186 TYR 187 0.0931

TYR 187 ASP 188 0.0000

ASP 188 PHE 189 0.0214

PHE 189 ASP 190 0.0001

ASP 190 THR 191 -0.0063

THR 191 LYS 192 0.0002

LYS 192 THR 193 -0.0515

THR 193 MET 194 0.0004

MET 194 LYS 195 -0.0559

LYS 195 LYS 196 0.0004

LYS 196 ARG 197 -0.0505

ARG 197 TYR 198 -0.0003

TYR 198 TYR 199 -0.0250

TYR 199 TYR 200 0.0001

TYR 200 ILE 201 -0.0177

ILE 201 VAL 202 0.0001

VAL 202 LYS 203 -0.0345

LYS 203 ASN 204 0.0003

ASN 204 SER 205 -0.0213

SER 205 TRP 206 0.0001

TRP 206 GLY 207 0.0176

GLY 207 VAL 208 -0.0001

VAL 208 SER 209 -0.0222

SER 209 TRP 210 0.0001

TRP 210 GLY 211 -0.0303

GLY 211 GLU 212 0.0002

GLU 212 LYS 213 0.0010

LYS 213 GLY 214 -0.0000

GLY 214 PHE 215 -0.0188

PHE 215 ILE 216 0.0001

ILE 216 ARG 217 -0.0269

ARG 217 LEU 218 0.0001

LEU 218 GLU 219 -0.0332

GLU 219 THR 220 0.0002

THR 220 ASP 221 -0.0048

ASP 221 ILE 222 -0.0001

ILE 222 ASN 223 -0.0085

ASN 223 GLY 224 0.0003

GLY 224 TYR 225 -0.0369

TYR 225 ARG 226 0.0001

ARG 226 LYS 227 0.0056

LYS 227 PRO 228 -0.0001

PRO 228 CYS 229 -0.0375

CYS 229 SER 230 0.0003

SER 230 LEU 231 0.0040

LEU 231 GLY 232 0.0005

GLY 232 THR 233 0.0170

THR 233 GLU 234 -0.0002

GLU 234 ALA 235 -0.0250

ALA 235 LEU 236 -0.0001

LEU 236 VAL 237 0.0168

VAL 237 ALA 238 0.0002

ALA 238 LEU 239 0.0390

LEU 239 VAL 240 -0.0000

VAL 240 ASP 241 0.0705

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 22 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *