Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 20 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0004

ASN 2 TYR 3 0.0174

TYR 3 GLU 4 -0.0001

GLU 4 ASP 5 0.0122

ASP 5 VAL 6 -0.0001

VAL 6 ILE 7 0.0031

ILE 7 ASP 8 -0.0003

ASP 8 LYS 9 0.0044

LYS 9 TYR 10 -0.0000

TYR 10 LYS 11 -0.0068

LYS 11 PRO 12 -0.0002

PRO 12 LYS 13 0.0499

LYS 13 ASP 14 0.0002

ASP 14 ALA 15 0.0070

ALA 15 THR 16 0.0000

THR 16 PHE 17 -0.0231

PHE 17 ASP 18 0.0005

ASP 18 HSP 19 0.2623

HSP 19 ALA 20 0.0000

ALA 20 SER 21 -0.0272

SER 21 TYR 22 -0.0000

TYR 22 ASP 23 0.0408

ASP 23 TRP 24 -0.0001

TRP 24 ARG 25 -0.1432

ARG 25 LEU 26 0.0001

LEU 26 HSP 27 -0.0048

HSP 27 LYS 28 -0.0001

LYS 28 GLY 29 0.4151

GLY 29 VAL 30 0.0001

VAL 30 THR 31 0.0920

THR 31 PRO 32 0.0001

PRO 32 VAL 33 0.0002

VAL 33 LYS 34 0.0001

LYS 34 ASP 35 0.1009

ASP 35 GLN 36 0.0000

GLN 36 ALA 37 0.0723

ALA 37 ASN 38 -0.0002

ASN 38 CYS 39 0.0483

CYS 39 GLY 40 -0.0000

GLY 40 SER 41 -0.0175

SER 41 CYM 42 0.0000

CYM 42 TRP 43 -0.0049

TRP 43 ALA 44 -0.0001

ALA 44 PHE 45 0.0171

PHE 45 SER 46 0.0001

SER 46 THR 47 -0.0049

THR 47 VAL 48 -0.0001

VAL 48 GLY 49 0.0200

GLY 49 VAL 50 -0.0001

VAL 50 VAL 51 0.0024

VAL 51 GLU 52 0.0003

GLU 52 SER 53 0.0409

SER 53 GLN 54 -0.0002

GLN 54 TYR 55 -0.1058

TYR 55 ALA 56 0.0002

ALA 56 ILE 57 -0.0352

ILE 57 ARG 58 -0.0001

ARG 58 LYS 59 -0.1001

LYS 59 ASN 60 -0.0001

ASN 60 GLN 61 -0.0236

GLN 61 LEU 62 0.0001

LEU 62 VAL 63 0.0547

VAL 63 SER 64 -0.0002

SER 64 ILE 65 -0.0763

ILE 65 SER 66 -0.0002

SER 66 GLU 67 -0.0241

GLU 67 GLN 68 -0.0001

GLN 68 GLN 69 0.0296

GLN 69 MET 70 0.0001

MET 70 VAL 71 0.0044

VAL 71 ASP 72 -0.0001

ASP 72 CYS 73 0.0855

CYS 73 SER 74 -0.0001

SER 74 THR 75 -0.0049

THR 75 GLN 76 0.0000

GLN 76 ASN 77 0.0257

ASN 77 THR 78 0.0001

THR 78 GLY 79 0.0687

GLY 79 CYS 80 -0.0001

CYS 80 TYR 81 0.0193

TYR 81 GLY 82 -0.0000

GLY 82 GLY 83 0.0535

GLY 83 PHE 84 -0.0001

PHE 84 ILE 85 0.0174

ILE 85 PRO 86 -0.0001

PRO 86 LEU 87 0.0057

LEU 87 ALA 88 0.0003

ALA 88 PHE 89 0.0147

PHE 89 GLU 90 0.0004

GLU 90 ASP 91 0.0110

ASP 91 MET 92 -0.0002

MET 92 ILE 93 0.0056

ILE 93 GLU 94 0.0000

GLU 94 MET 95 -0.0085

MET 95 GLY 96 0.0001

GLY 96 GLY 97 0.0045

GLY 97 LEU 98 -0.0005

LEU 98 CYS 99 -0.0368

CYS 99 SER 100 -0.0005

SER 100 SER 101 -0.0298

SER 101 GLU 102 -0.0003

GLU 102 ASP 103 0.0851

ASP 103 TYR 104 0.0002

TYR 104 PRO 105 -0.1221

PRO 105 TYR 106 -0.0003

TYR 106 VAL 107 -0.0651

VAL 107 ALA 108 0.0001

ALA 108 ASP 109 -0.0929

ASP 109 ILE 110 0.0000

ILE 110 PRO 111 0.0840

PRO 111 GLU 112 0.0001

GLU 112 MET 113 0.0468

MET 113 CYS 114 0.0001

CYS 114 LYS 115 -0.0749

LYS 115 PHE 116 0.0002

PHE 116 ASP 117 0.0268

ASP 117 ILE 118 0.0001

ILE 118 CYS 119 0.0655

CYS 119 GLU 120 0.0002

GLU 120 GLN 121 0.0401

GLN 121 LYS 122 -0.0000

LYS 122 TYR 123 0.0100

TYR 123 LYS 124 -0.0002

LYS 124 ILE 125 -0.0440

ILE 125 ASN 126 0.0000

ASN 126 ASN 127 -0.0089

ASN 127 PHE 128 0.0002

PHE 128 LEU 129 -0.0043

LEU 129 GLU 130 0.0000

GLU 130 ILE 131 0.0088

ILE 131 PRO 132 0.0003

PRO 132 GLU 133 -0.0034

GLU 133 ASP 134 -0.0003

ASP 134 LYS 135 -0.0220

LYS 135 PHE 136 0.0003

PHE 136 LYS 137 0.0107

LYS 137 GLU 138 -0.0001

GLU 138 ALA 139 0.0018

ALA 139 ILE 140 -0.0002

ILE 140 ARG 141 -0.0136

ARG 141 PHE 142 -0.0001

PHE 142 LEU 143 0.0043

LEU 143 GLY 144 -0.0003

GLY 144 PRO 145 -0.0259

PRO 145 LEU 146 0.0002

LEU 146 SER 147 -0.0143

SER 147 VAL 148 0.0000

VAL 148 SER 149 -0.0257

SER 149 ILE 150 -0.0000

ILE 150 ALA 151 -0.0201

ALA 151 VAL 152 -0.0001

VAL 152 SER 153 0.0053

SER 153 ASP 154 -0.0004

ASP 154 ASP 155 -0.0026

ASP 155 PHE 156 0.0002

PHE 156 ALA 157 0.0017

ALA 157 PHE 158 -0.0001

PHE 158 TYR 159 -0.0122

TYR 159 ARG 160 0.0000

ARG 160 GLY 161 -0.0046

GLY 161 GLY 162 0.0000

GLY 162 ILE 163 -0.0003

ILE 163 PHE 164 0.0000

PHE 164 ASP 165 -0.0042

ASP 165 GLY 166 -0.0003

GLY 166 GLU 167 -0.0252

GLU 167 CYS 168 0.0002

CYS 168 GLY 169 0.0030

GLY 169 GLU 170 -0.0002

GLU 170 ALA 171 -0.0125

ALA 171 PRO 172 0.0001

PRO 172 ASN 173 0.0263

ASN 173 HSP 174 0.0000

HSP 174 ALA 175 -0.0403

ALA 175 VAL 176 -0.0002

VAL 176 ILE 177 -0.0365

ILE 177 LEU 178 -0.0003

LEU 178 VAL 179 -0.0064

VAL 179 GLY 180 0.0001

GLY 180 PHE 181 -0.0148

PHE 181 GLY 182 -0.0002

GLY 182 ALA 183 0.1016

ALA 183 GLU 184 -0.0000

GLU 184 ASP 185 0.0605

ASP 185 ALA 186 -0.0002

ALA 186 TYR 187 0.1472

TYR 187 ASP 188 0.0004

ASP 188 PHE 189 0.0302

PHE 189 ASP 190 0.0001

ASP 190 THR 191 -0.0051

THR 191 LYS 192 -0.0003

LYS 192 THR 193 -0.0467

THR 193 MET 194 0.0002

MET 194 LYS 195 -0.0728

LYS 195 LYS 196 -0.0004

LYS 196 ARG 197 -0.0684

ARG 197 TYR 198 -0.0001

TYR 198 TYR 199 -0.0201

TYR 199 TYR 200 0.0000

TYR 200 ILE 201 -0.0336

ILE 201 VAL 202 -0.0001

VAL 202 LYS 203 -0.0308

LYS 203 ASN 204 -0.0003

ASN 204 SER 205 0.0085

SER 205 TRP 206 0.0003

TRP 206 GLY 207 -0.0151

GLY 207 VAL 208 0.0000

VAL 208 SER 209 -0.0099

SER 209 TRP 210 -0.0003

TRP 210 GLY 211 -0.0142

GLY 211 GLU 212 0.0001

GLU 212 LYS 213 -0.0381

LYS 213 GLY 214 -0.0004

GLY 214 PHE 215 -0.0162

PHE 215 ILE 216 -0.0001

ILE 216 ARG 217 -0.0216

ARG 217 LEU 218 0.0001

LEU 218 GLU 219 -0.0250

GLU 219 THR 220 -0.0000

THR 220 ASP 221 0.0034

ASP 221 ILE 222 -0.0001

ILE 222 ASN 223 -0.0149

ASN 223 GLY 224 -0.0005

GLY 224 TYR 225 -0.0308

TYR 225 ARG 226 0.0000

ARG 226 LYS 227 0.0209

LYS 227 PRO 228 -0.0001

PRO 228 CYS 229 -0.0072

CYS 229 SER 230 -0.0004

SER 230 LEU 231 -0.0200

LEU 231 GLY 232 -0.0003

GLY 232 THR 233 0.0202

THR 233 GLU 234 0.0002

GLU 234 ALA 235 -0.0194

ALA 235 LEU 236 0.0001

LEU 236 VAL 237 -0.0169

VAL 237 ALA 238 0.0002

ALA 238 LEU 239 0.0171

LEU 239 VAL 240 -0.0001

VAL 240 ASP 241 -0.0507

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 20 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *