Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 19 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0004

ASN 2 TYR 3 0.0513

TYR 3 GLU 4 0.0001

GLU 4 ASP 5 -0.0203

ASP 5 VAL 6 0.0001

VAL 6 ILE 7 0.0198

ILE 7 ASP 8 0.0001

ASP 8 LYS 9 0.0046

LYS 9 TYR 10 0.0000

TYR 10 LYS 11 0.0093

LYS 11 PRO 12 0.0003

PRO 12 LYS 13 -0.0268

LYS 13 ASP 14 0.0005

ASP 14 ALA 15 0.1014

ALA 15 THR 16 0.0001

THR 16 PHE 17 0.0887

PHE 17 ASP 18 0.0003

ASP 18 HSP 19 -0.1221

HSP 19 ALA 20 0.0002

ALA 20 SER 21 -0.1500

SER 21 TYR 22 -0.0000

TYR 22 ASP 23 0.0825

ASP 23 TRP 24 0.0001

TRP 24 ARG 25 -0.0819

ARG 25 LEU 26 -0.0001

LEU 26 HSP 27 0.1124

HSP 27 LYS 28 -0.0001

LYS 28 GLY 29 -0.3192

GLY 29 VAL 30 -0.0002

VAL 30 THR 31 -0.1030

THR 31 PRO 32 -0.0001

PRO 32 VAL 33 -0.1689

VAL 33 LYS 34 -0.0002

LYS 34 ASP 35 0.0003

ASP 35 GLN 36 -0.0001

GLN 36 ALA 37 -0.0400

ALA 37 ASN 38 -0.0001

ASN 38 CYS 39 -0.0526

CYS 39 GLY 40 0.0000

GLY 40 SER 41 -0.0072

SER 41 CYM 42 0.0004

CYM 42 TRP 43 -0.0135

TRP 43 ALA 44 0.0002

ALA 44 PHE 45 -0.0096

PHE 45 SER 46 0.0003

SER 46 THR 47 0.0124

THR 47 VAL 48 -0.0002

VAL 48 GLY 49 0.0011

GLY 49 VAL 50 -0.0001

VAL 50 VAL 51 0.0081

VAL 51 GLU 52 0.0002

GLU 52 SER 53 -0.0255

SER 53 GLN 54 -0.0001

GLN 54 TYR 55 -0.0227

TYR 55 ALA 56 -0.0002

ALA 56 ILE 57 0.0394

ILE 57 ARG 58 -0.0001

ARG 58 LYS 59 0.0741

LYS 59 ASN 60 0.0005

ASN 60 GLN 61 -0.0626

GLN 61 LEU 62 -0.0001

LEU 62 VAL 63 -0.3942

VAL 63 SER 64 0.0002

SER 64 ILE 65 -0.0663

ILE 65 SER 66 0.0000

SER 66 GLU 67 -0.0419

GLU 67 GLN 68 -0.0002

GLN 68 GLN 69 -0.0266

GLN 69 MET 70 0.0001

MET 70 VAL 71 -0.0057

VAL 71 ASP 72 0.0004

ASP 72 CYS 73 -0.0415

CYS 73 SER 74 -0.0002

SER 74 THR 75 0.0111

THR 75 GLN 76 -0.0002

GLN 76 ASN 77 -0.0345

ASN 77 THR 78 0.0000

THR 78 GLY 79 -0.0489

GLY 79 CYS 80 -0.0000

CYS 80 TYR 81 0.0077

TYR 81 GLY 82 0.0003

GLY 82 GLY 83 -0.0728

GLY 83 PHE 84 -0.0004

PHE 84 ILE 85 -0.0400

ILE 85 PRO 86 0.0003

PRO 86 LEU 87 0.0496

LEU 87 ALA 88 0.0001

ALA 88 PHE 89 -0.0384

PHE 89 GLU 90 -0.0001

GLU 90 ASP 91 0.0209

ASP 91 MET 92 0.0001

MET 92 ILE 93 -0.0207

ILE 93 GLU 94 0.0003

GLU 94 MET 95 0.0343

MET 95 GLY 96 -0.0002

GLY 96 GLY 97 -0.0236

GLY 97 LEU 98 -0.0000

LEU 98 CYS 99 0.0596

CYS 99 SER 100 0.0003

SER 100 SER 101 0.0354

SER 101 GLU 102 0.0003

GLU 102 ASP 103 -0.0539

ASP 103 TYR 104 0.0000

TYR 104 PRO 105 0.0571

PRO 105 TYR 106 -0.0002

TYR 106 VAL 107 0.0180

VAL 107 ALA 108 0.0000

ALA 108 ASP 109 0.0151

ASP 109 ILE 110 -0.0003

ILE 110 PRO 111 -0.0195

PRO 111 GLU 112 0.0000

GLU 112 MET 113 -0.0278

MET 113 CYS 114 -0.0001

CYS 114 LYS 115 0.1259

LYS 115 PHE 116 -0.0001

PHE 116 ASP 117 -0.0054

ASP 117 ILE 118 0.0001

ILE 118 CYS 119 -0.0776

CYS 119 GLU 120 -0.0001

GLU 120 GLN 121 -0.0280

GLN 121 LYS 122 0.0001

LYS 122 TYR 123 0.0129

TYR 123 LYS 124 -0.0002

LYS 124 ILE 125 0.1051

ILE 125 ASN 126 0.0002

ASN 126 ASN 127 0.0976

ASN 127 PHE 128 0.0002

PHE 128 LEU 129 0.0884

LEU 129 GLU 130 -0.0002

GLU 130 ILE 131 0.1495

ILE 131 PRO 132 -0.0001

PRO 132 GLU 133 -0.0224

GLU 133 ASP 134 0.0002

ASP 134 LYS 135 -0.0611

LYS 135 PHE 136 -0.0005

PHE 136 LYS 137 0.0815

LYS 137 GLU 138 0.0001

GLU 138 ALA 139 0.0185

ALA 139 ILE 140 0.0002

ILE 140 ARG 141 -0.0318

ARG 141 PHE 142 0.0002

PHE 142 LEU 143 0.0182

LEU 143 GLY 144 -0.0001

GLY 144 PRO 145 0.0178

PRO 145 LEU 146 -0.0003

LEU 146 SER 147 -0.0032

SER 147 VAL 148 -0.0000

VAL 148 SER 149 -0.0639

SER 149 ILE 150 -0.0001

ILE 150 ALA 151 -0.0293

ALA 151 VAL 152 0.0001

VAL 152 SER 153 -0.0289

SER 153 ASP 154 0.0002

ASP 154 ASP 155 -0.0099

ASP 155 PHE 156 -0.0002

PHE 156 ALA 157 -0.0141

ALA 157 PHE 158 -0.0002

PHE 158 TYR 159 0.0096

TYR 159 ARG 160 -0.0001

ARG 160 GLY 161 -0.0061

GLY 161 GLY 162 -0.0002

GLY 162 ILE 163 -0.0271

ILE 163 PHE 164 0.0000

PHE 164 ASP 165 -0.0081

ASP 165 GLY 166 -0.0002

GLY 166 GLU 167 -0.0180

GLU 167 CYS 168 -0.0004

CYS 168 GLY 169 -0.0095

GLY 169 GLU 170 0.0001

GLU 170 ALA 171 0.0121

ALA 171 PRO 172 -0.0000

PRO 172 ASN 173 0.0204

ASN 173 HSP 174 -0.0000

HSP 174 ALA 175 -0.0258

ALA 175 VAL 176 -0.0001

VAL 176 ILE 177 0.0120

ILE 177 LEU 178 -0.0000

LEU 178 VAL 179 -0.0034

VAL 179 GLY 180 0.0000

GLY 180 PHE 181 0.1550

PHE 181 GLY 182 -0.0002

GLY 182 ALA 183 0.6247

ALA 183 GLU 184 0.0000

GLU 184 ASP 185 0.3617

ASP 185 ALA 186 -0.0001

ALA 186 TYR 187 0.6483

TYR 187 ASP 188 0.0000

ASP 188 PHE 189 0.1171

PHE 189 ASP 190 -0.0001

ASP 190 THR 191 -0.0427

THR 191 LYS 192 -0.0000

LYS 192 THR 193 -0.1306

THR 193 MET 194 -0.0002

MET 194 LYS 195 -0.1667

LYS 195 LYS 196 0.0001

LYS 196 ARG 197 -0.1703

ARG 197 TYR 198 -0.0006

TYR 198 TYR 199 0.0767

TYR 199 TYR 200 -0.0002

TYR 200 ILE 201 -0.0372

ILE 201 VAL 202 -0.0002

VAL 202 LYS 203 0.0317

LYS 203 ASN 204 -0.0001

ASN 204 SER 205 0.0058

SER 205 TRP 206 0.0001

TRP 206 GLY 207 -0.0044

GLY 207 VAL 208 -0.0001

VAL 208 SER 209 -0.0375

SER 209 TRP 210 -0.0004

TRP 210 GLY 211 -0.0013

GLY 211 GLU 212 -0.0002

GLU 212 LYS 213 -0.0585

LYS 213 GLY 214 0.0001

GLY 214 PHE 215 0.0034

PHE 215 ILE 216 0.0001

ILE 216 ARG 217 0.0049

ARG 217 LEU 218 -0.0000

LEU 218 GLU 219 -0.0167

GLU 219 THR 220 0.0001

THR 220 ASP 221 0.0659

ASP 221 ILE 222 -0.0000

ILE 222 ASN 223 -0.0258

ASN 223 GLY 224 -0.0002

GLY 224 TYR 225 -0.0022

TYR 225 ARG 226 -0.0001

ARG 226 LYS 227 0.0260

LYS 227 PRO 228 0.0001

PRO 228 CYS 229 0.0234

CYS 229 SER 230 0.0001

SER 230 LEU 231 -0.0692

LEU 231 GLY 232 0.0001

GLY 232 THR 233 -0.0271

THR 233 GLU 234 0.0003

GLU 234 ALA 235 0.0022

ALA 235 LEU 236 -0.0001

LEU 236 VAL 237 -0.0321

VAL 237 ALA 238 0.0000

ALA 238 LEU 239 -0.0242

LEU 239 VAL 240 0.0001

VAL 240 ASP 241 0.0224

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 19 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *