Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 18 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 0.0004

ASN 2 TYR 3 -0.0363

TYR 3 GLU 4 -0.0003

GLU 4 ASP 5 -0.0274

ASP 5 VAL 6 -0.0002

VAL 6 ILE 7 -0.0070

ILE 7 ASP 8 0.0002

ASP 8 LYS 9 -0.0157

LYS 9 TYR 10 0.0000

TYR 10 LYS 11 -0.0130

LYS 11 PRO 12 -0.0004

PRO 12 LYS 13 -0.0295

LYS 13 ASP 14 -0.0001

ASP 14 ALA 15 0.1182

ALA 15 THR 16 -0.0000

THR 16 PHE 17 0.0175

PHE 17 ASP 18 -0.0000

ASP 18 HSP 19 -0.0415

HSP 19 ALA 20 -0.0003

ALA 20 SER 21 0.1354

SER 21 TYR 22 -0.0001

TYR 22 ASP 23 -0.0429

ASP 23 TRP 24 0.0001

TRP 24 ARG 25 -0.0219

ARG 25 LEU 26 0.0002

LEU 26 HSP 27 0.0300

HSP 27 LYS 28 -0.0004

LYS 28 GLY 29 -0.0419

GLY 29 VAL 30 -0.0001

VAL 30 THR 31 -0.0169

THR 31 PRO 32 0.0001

PRO 32 VAL 33 0.0083

VAL 33 LYS 34 0.0002

LYS 34 ASP 35 0.0743

ASP 35 GLN 36 0.0001

GLN 36 ALA 37 -0.0325

ALA 37 ASN 38 -0.0001

ASN 38 CYS 39 -0.1246

CYS 39 GLY 40 0.0001

GLY 40 SER 41 -0.0173

SER 41 CYM 42 0.0001

CYM 42 TRP 43 -0.0660

TRP 43 ALA 44 -0.0001

ALA 44 PHE 45 0.0041

PHE 45 SER 46 0.0003

SER 46 THR 47 -0.0033

THR 47 VAL 48 0.0003

VAL 48 GLY 49 0.0420

GLY 49 VAL 50 0.0001

VAL 50 VAL 51 -0.0127

VAL 51 GLU 52 0.0000

GLU 52 SER 53 0.0073

SER 53 GLN 54 -0.0002

GLN 54 TYR 55 -0.0633

TYR 55 ALA 56 -0.0002

ALA 56 ILE 57 -0.0271

ILE 57 ARG 58 -0.0001

ARG 58 LYS 59 -0.0903

LYS 59 ASN 60 -0.0002

ASN 60 GLN 61 -0.0261

GLN 61 LEU 62 -0.0001

LEU 62 VAL 63 -0.0103

VAL 63 SER 64 0.0004

SER 64 ILE 65 -0.0057

ILE 65 SER 66 -0.0001

SER 66 GLU 67 0.1160

GLU 67 GLN 68 0.0001

GLN 68 GLN 69 0.1555

GLN 69 MET 70 0.0000

MET 70 VAL 71 0.0564

VAL 71 ASP 72 -0.0000

ASP 72 CYS 73 0.0120

CYS 73 SER 74 -0.0001

SER 74 THR 75 -0.0092

THR 75 GLN 76 -0.0003

GLN 76 ASN 77 -0.0089

ASN 77 THR 78 0.0000

THR 78 GLY 79 0.0846

GLY 79 CYS 80 0.0004

CYS 80 TYR 81 0.0871

TYR 81 GLY 82 -0.0003

GLY 82 GLY 83 0.0515

GLY 83 PHE 84 -0.0001

PHE 84 ILE 85 0.0618

ILE 85 PRO 86 -0.0001

PRO 86 LEU 87 0.0287

LEU 87 ALA 88 -0.0001

ALA 88 PHE 89 0.0172

PHE 89 GLU 90 -0.0002

GLU 90 ASP 91 -0.0218

ASP 91 MET 92 0.0004

MET 92 ILE 93 0.0419

ILE 93 GLU 94 0.0000

GLU 94 MET 95 -0.0673

MET 95 GLY 96 -0.0004

GLY 96 GLY 97 0.0392

GLY 97 LEU 98 0.0001

LEU 98 CYS 99 -0.0731

CYS 99 SER 100 -0.0002

SER 100 SER 101 -0.0181

SER 101 GLU 102 -0.0005

GLU 102 ASP 103 0.0943

ASP 103 TYR 104 0.0002

TYR 104 PRO 105 -0.2073

PRO 105 TYR 106 -0.0000

TYR 106 VAL 107 0.0767

VAL 107 ALA 108 0.0000

ALA 108 ASP 109 -0.1482

ASP 109 ILE 110 0.0003

ILE 110 PRO 111 0.0586

PRO 111 GLU 112 0.0001

GLU 112 MET 113 -0.0619

MET 113 CYS 114 -0.0001

CYS 114 LYS 115 0.0467

LYS 115 PHE 116 -0.0002

PHE 116 ASP 117 0.0198

ASP 117 ILE 118 -0.0000

ILE 118 CYS 119 -0.0576

CYS 119 GLU 120 0.0000

GLU 120 GLN 121 -0.0843

GLN 121 LYS 122 0.0001

LYS 122 TYR 123 -0.1952

TYR 123 LYS 124 0.0001

LYS 124 ILE 125 -0.1818

ILE 125 ASN 126 0.0001

ASN 126 ASN 127 -0.1464

ASN 127 PHE 128 -0.0001

PHE 128 LEU 129 -0.0826

LEU 129 GLU 130 -0.0004

GLU 130 ILE 131 -0.0140

ILE 131 PRO 132 0.0001

PRO 132 GLU 133 -0.0961

GLU 133 ASP 134 0.0001

ASP 134 LYS 135 -0.0698

LYS 135 PHE 136 0.0000

PHE 136 LYS 137 0.0185

LYS 137 GLU 138 0.0002

GLU 138 ALA 139 -0.0501

ALA 139 ILE 140 0.0001

ILE 140 ARG 141 0.0052

ARG 141 PHE 142 -0.0002

PHE 142 LEU 143 -0.0205

LEU 143 GLY 144 0.0002

GLY 144 PRO 145 0.0127

PRO 145 LEU 146 0.0003

LEU 146 SER 147 0.0185

SER 147 VAL 148 0.0001

VAL 148 SER 149 -0.0408

SER 149 ILE 150 0.0000

ILE 150 ALA 151 -0.0435

ALA 151 VAL 152 -0.0001

VAL 152 SER 153 -0.0435

SER 153 ASP 154 0.0002

ASP 154 ASP 155 -0.0296

ASP 155 PHE 156 0.0002

PHE 156 ALA 157 0.0251

ALA 157 PHE 158 -0.0001

PHE 158 TYR 159 -0.0043

TYR 159 ARG 160 -0.0002

ARG 160 GLY 161 0.0199

GLY 161 GLY 162 0.0001

GLY 162 ILE 163 0.0088

ILE 163 PHE 164 0.0001

PHE 164 ASP 165 0.0228

ASP 165 GLY 166 -0.0002

GLY 166 GLU 167 0.0052

GLU 167 CYS 168 -0.0001

CYS 168 GLY 169 0.0121

GLY 169 GLU 170 0.0000

GLU 170 ALA 171 -0.0092

ALA 171 PRO 172 0.0001

PRO 172 ASN 173 0.0896

ASN 173 HSP 174 -0.0001

HSP 174 ALA 175 -0.0377

ALA 175 VAL 176 -0.0000

VAL 176 ILE 177 0.0327

ILE 177 LEU 178 0.0000

LEU 178 VAL 179 -0.0120

VAL 179 GLY 180 0.0002

GLY 180 PHE 181 -0.0076

PHE 181 GLY 182 -0.0003

GLY 182 ALA 183 0.0482

ALA 183 GLU 184 -0.0004

GLU 184 ASP 185 0.0186

ASP 185 ALA 186 -0.0000

ALA 186 TYR 187 -0.0539

TYR 187 ASP 188 0.0001

ASP 188 PHE 189 -0.0098

PHE 189 ASP 190 -0.0001

ASP 190 THR 191 0.0216

THR 191 LYS 192 0.0001

LYS 192 THR 193 0.0422

THR 193 MET 194 0.0000

MET 194 LYS 195 -0.0540

LYS 195 LYS 196 -0.0001

LYS 196 ARG 197 -0.1288

ARG 197 TYR 198 -0.0001

TYR 198 TYR 199 -0.0070

TYR 199 TYR 200 0.0000

TYR 200 ILE 201 0.0022

ILE 201 VAL 202 0.0002

VAL 202 LYS 203 0.0233

LYS 203 ASN 204 -0.0003

ASN 204 SER 205 0.0356

SER 205 TRP 206 0.0000

TRP 206 GLY 207 -0.0741

GLY 207 VAL 208 0.0001

VAL 208 SER 209 0.0333

SER 209 TRP 210 -0.0001

TRP 210 GLY 211 0.0247

GLY 211 GLU 212 0.0003

GLU 212 LYS 213 0.0857

LYS 213 GLY 214 0.0002

GLY 214 PHE 215 0.0077

PHE 215 ILE 216 0.0001

ILE 216 ARG 217 0.0264

ARG 217 LEU 218 -0.0001

LEU 218 GLU 219 0.0264

GLU 219 THR 220 -0.0001

THR 220 ASP 221 0.0347

ASP 221 ILE 222 -0.0001

ILE 222 ASN 223 0.0008

ASN 223 GLY 224 -0.0001

GLY 224 TYR 225 -0.1208

TYR 225 ARG 226 0.0001

ARG 226 LYS 227 0.0751

LYS 227 PRO 228 0.0001

PRO 228 CYS 229 0.0757

CYS 229 SER 230 -0.0002

SER 230 LEU 231 -0.0914

LEU 231 GLY 232 0.0002

GLY 232 THR 233 -0.0027

THR 233 GLU 234 0.0003

GLU 234 ALA 235 0.0212

ALA 235 LEU 236 -0.0001

LEU 236 VAL 237 -0.0133

VAL 237 ALA 238 0.0001

ALA 238 LEU 239 0.0185

LEU 239 VAL 240 0.0001

VAL 240 ASP 241 -0.0169

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 18 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *