Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 17 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0003

ASN 2 TYR 3 0.0071

TYR 3 GLU 4 0.0000

GLU 4 ASP 5 -0.0323

ASP 5 VAL 6 -0.0001

VAL 6 ILE 7 0.0042

ILE 7 ASP 8 -0.0003

ASP 8 LYS 9 0.0215

LYS 9 TYR 10 0.0002

TYR 10 LYS 11 -0.0864

LYS 11 PRO 12 -0.0002

PRO 12 LYS 13 0.0863

LYS 13 ASP 14 -0.0003

ASP 14 ALA 15 0.0866

ALA 15 THR 16 -0.0001

THR 16 PHE 17 0.0700

PHE 17 ASP 18 -0.0001

ASP 18 HSP 19 0.0808

HSP 19 ALA 20 0.0001

ALA 20 SER 21 0.2361

SER 21 TYR 22 -0.0003

TYR 22 ASP 23 -0.0051

ASP 23 TRP 24 0.0001

TRP 24 ARG 25 0.0019

ARG 25 LEU 26 0.0001

LEU 26 HSP 27 -0.2017

HSP 27 LYS 28 -0.0000

LYS 28 GLY 29 0.1815

GLY 29 VAL 30 -0.0001

VAL 30 THR 31 0.0486

THR 31 PRO 32 -0.0001

PRO 32 VAL 33 0.1339

VAL 33 LYS 34 -0.0001

LYS 34 ASP 35 -0.2162

ASP 35 GLN 36 -0.0002

GLN 36 ALA 37 -0.1079

ALA 37 ASN 38 -0.0001

ASN 38 CYS 39 -0.0678

CYS 39 GLY 40 0.0006

GLY 40 SER 41 -0.0016

SER 41 CYM 42 -0.0000

CYM 42 TRP 43 -0.0112

TRP 43 ALA 44 -0.0003

ALA 44 PHE 45 0.0135

PHE 45 SER 46 0.0002

SER 46 THR 47 0.0046

THR 47 VAL 48 0.0004

VAL 48 GLY 49 0.0332

GLY 49 VAL 50 -0.0001

VAL 50 VAL 51 0.0213

VAL 51 GLU 52 0.0000

GLU 52 SER 53 0.0387

SER 53 GLN 54 -0.0001

GLN 54 TYR 55 0.0296

TYR 55 ALA 56 -0.0002

ALA 56 ILE 57 0.0791

ILE 57 ARG 58 -0.0003

ARG 58 LYS 59 0.0480

LYS 59 ASN 60 -0.0000

ASN 60 GLN 61 -0.0614

GLN 61 LEU 62 0.0001

LEU 62 VAL 63 0.1046

VAL 63 SER 64 0.0002

SER 64 ILE 65 0.0132

ILE 65 SER 66 0.0001

SER 66 GLU 67 0.0335

GLU 67 GLN 68 -0.0001

GLN 68 GLN 69 0.0076

GLN 69 MET 70 -0.0000

MET 70 VAL 71 0.0032

VAL 71 ASP 72 0.0004

ASP 72 CYS 73 0.0052

CYS 73 SER 74 0.0000

SER 74 THR 75 0.0023

THR 75 GLN 76 0.0001

GLN 76 ASN 77 -0.0027

ASN 77 THR 78 -0.0001

THR 78 GLY 79 -0.0143

GLY 79 CYS 80 0.0002

CYS 80 TYR 81 -0.0112

TYR 81 GLY 82 0.0002

GLY 82 GLY 83 -0.0231

GLY 83 PHE 84 -0.0003

PHE 84 ILE 85 0.0037

ILE 85 PRO 86 -0.0003

PRO 86 LEU 87 -0.0102

LEU 87 ALA 88 0.0001

ALA 88 PHE 89 -0.0082

PHE 89 GLU 90 0.0001

GLU 90 ASP 91 -0.0056

ASP 91 MET 92 0.0005

MET 92 ILE 93 0.0063

ILE 93 GLU 94 -0.0001

GLU 94 MET 95 -0.0086

MET 95 GLY 96 -0.0002

GLY 96 GLY 97 0.0105

GLY 97 LEU 98 0.0001

LEU 98 CYS 99 -0.0161

CYS 99 SER 100 0.0001

SER 100 SER 101 -0.0122

SER 101 GLU 102 -0.0004

GLU 102 ASP 103 -0.0026

ASP 103 TYR 104 -0.0002

TYR 104 PRO 105 -0.0116

PRO 105 TYR 106 0.0001

TYR 106 VAL 107 0.0071

VAL 107 ALA 108 -0.0002

ALA 108 ASP 109 -0.0108

ASP 109 ILE 110 0.0001

ILE 110 PRO 111 0.0073

PRO 111 GLU 112 0.0003

GLU 112 MET 113 0.0043

MET 113 CYS 114 -0.0001

CYS 114 LYS 115 -0.0179

LYS 115 PHE 116 0.0003

PHE 116 ASP 117 -0.0022

ASP 117 ILE 118 0.0000

ILE 118 CYS 119 0.0113

CYS 119 GLU 120 -0.0005

GLU 120 GLN 121 0.0119

GLN 121 LYS 122 -0.0001

LYS 122 TYR 123 0.0109

TYR 123 LYS 124 0.0002

LYS 124 ILE 125 -0.0066

ILE 125 ASN 126 0.0003

ASN 126 ASN 127 -0.0096

ASN 127 PHE 128 -0.0000

PHE 128 LEU 129 -0.0070

LEU 129 GLU 130 -0.0000

GLU 130 ILE 131 0.0110

ILE 131 PRO 132 0.0001

PRO 132 GLU 133 -0.0508

GLU 133 ASP 134 0.0003

ASP 134 LYS 135 -0.0255

LYS 135 PHE 136 -0.0003

PHE 136 LYS 137 0.0146

LYS 137 GLU 138 0.0001

GLU 138 ALA 139 0.0328

ALA 139 ILE 140 -0.0001

ILE 140 ARG 141 -0.0377

ARG 141 PHE 142 -0.0001

PHE 142 LEU 143 0.0103

LEU 143 GLY 144 -0.0001

GLY 144 PRO 145 0.0025

PRO 145 LEU 146 0.0001

LEU 146 SER 147 0.0016

SER 147 VAL 148 0.0000

VAL 148 SER 149 -0.0086

SER 149 ILE 150 0.0000

ILE 150 ALA 151 0.0044

ALA 151 VAL 152 0.0003

VAL 152 SER 153 -0.0005

SER 153 ASP 154 0.0001

ASP 154 ASP 155 0.0014

ASP 155 PHE 156 0.0001

PHE 156 ALA 157 -0.0061

ALA 157 PHE 158 -0.0001

PHE 158 TYR 159 -0.0008

TYR 159 ARG 160 -0.0003

ARG 160 GLY 161 -0.0038

GLY 161 GLY 162 -0.0001

GLY 162 ILE 163 0.0264

ILE 163 PHE 164 0.0001

PHE 164 ASP 165 0.0069

ASP 165 GLY 166 0.0004

GLY 166 GLU 167 -0.0106

GLU 167 CYS 168 0.0000

CYS 168 GLY 169 0.0079

GLY 169 GLU 170 0.0002

GLU 170 ALA 171 -0.0115

ALA 171 PRO 172 0.0000

PRO 172 ASN 173 -0.0318

ASN 173 HSP 174 0.0001

HSP 174 ALA 175 0.0003

ALA 175 VAL 176 -0.0002

VAL 176 ILE 177 0.0095

ILE 177 LEU 178 0.0002

LEU 178 VAL 179 -0.0064

VAL 179 GLY 180 -0.0003

GLY 180 PHE 181 0.1510

PHE 181 GLY 182 -0.0001

GLY 182 ALA 183 0.2375

ALA 183 GLU 184 0.0003

GLU 184 ASP 185 0.0364

ASP 185 ALA 186 0.0001

ALA 186 TYR 187 0.2615

TYR 187 ASP 188 0.0001

ASP 188 PHE 189 0.0652

PHE 189 ASP 190 0.0001

ASP 190 THR 191 -0.0505

THR 191 LYS 192 0.0003

LYS 192 THR 193 -0.1120

THR 193 MET 194 -0.0001

MET 194 LYS 195 -0.0037

LYS 195 LYS 196 -0.0003

LYS 196 ARG 197 0.0217

ARG 197 TYR 198 -0.0002

TYR 198 TYR 199 0.1046

TYR 199 TYR 200 -0.0002

TYR 200 ILE 201 0.0253

ILE 201 VAL 202 0.0001

VAL 202 LYS 203 0.0912

LYS 203 ASN 204 -0.0002

ASN 204 SER 205 0.0028

SER 205 TRP 206 0.0002

TRP 206 GLY 207 0.0058

GLY 207 VAL 208 0.0001

VAL 208 SER 209 0.0201

SER 209 TRP 210 -0.0000

TRP 210 GLY 211 0.0183

GLY 211 GLU 212 -0.0002

GLU 212 LYS 213 0.0918

LYS 213 GLY 214 0.0002

GLY 214 PHE 215 0.0332

PHE 215 ILE 216 -0.0000

ILE 216 ARG 217 0.0626

ARG 217 LEU 218 -0.0000

LEU 218 GLU 219 0.0388

GLU 219 THR 220 0.0002

THR 220 ASP 221 0.0445

ASP 221 ILE 222 0.0001

ILE 222 ASN 223 0.0047

ASN 223 GLY 224 -0.0002

GLY 224 TYR 225 -0.0565

TYR 225 ARG 226 -0.0001

ARG 226 LYS 227 0.0245

LYS 227 PRO 228 -0.0000

PRO 228 CYS 229 -0.0270

CYS 229 SER 230 -0.0003

SER 230 LEU 231 -0.0318

LEU 231 GLY 232 -0.0001

GLY 232 THR 233 -0.0048

THR 233 GLU 234 0.0003

GLU 234 ALA 235 0.0228

ALA 235 LEU 236 -0.0001

LEU 236 VAL 237 -0.0142

VAL 237 ALA 238 0.0003

ALA 238 LEU 239 -0.0271

LEU 239 VAL 240 -0.0000

VAL 240 ASP 241 0.0106

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 17 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *