Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 16 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 0.0000

ASN 2 TYR 3 0.0090

TYR 3 GLU 4 -0.0001

GLU 4 ASP 5 -0.0190

ASP 5 VAL 6 0.0005

VAL 6 ILE 7 0.0007

ILE 7 ASP 8 0.0002

ASP 8 LYS 9 0.0026

LYS 9 TYR 10 0.0002

TYR 10 LYS 11 -0.0336

LYS 11 PRO 12 0.0003

PRO 12 LYS 13 0.0518

LYS 13 ASP 14 -0.0000

ASP 14 ALA 15 -0.0285

ALA 15 THR 16 -0.0003

THR 16 PHE 17 0.0068

PHE 17 ASP 18 -0.0003

ASP 18 HSP 19 0.0786

HSP 19 ALA 20 0.0002

ALA 20 SER 21 0.0200

SER 21 TYR 22 -0.0001

TYR 22 ASP 23 0.0310

ASP 23 TRP 24 -0.0000

TRP 24 ARG 25 -0.0147

ARG 25 LEU 26 -0.0001

LEU 26 HSP 27 -0.0685

HSP 27 LYS 28 0.0003

LYS 28 GLY 29 0.2605

GLY 29 VAL 30 -0.0001

VAL 30 THR 31 0.0368

THR 31 PRO 32 0.0002

PRO 32 VAL 33 0.1034

VAL 33 LYS 34 0.0001

LYS 34 ASP 35 0.0766

ASP 35 GLN 36 0.0000

GLN 36 ALA 37 -0.0971

ALA 37 ASN 38 -0.0003

ASN 38 CYS 39 -0.0986

CYS 39 GLY 40 0.0000

GLY 40 SER 41 -0.0176

SER 41 CYM 42 -0.0001

CYM 42 TRP 43 0.0082

TRP 43 ALA 44 0.0003

ALA 44 PHE 45 -0.0473

PHE 45 SER 46 -0.0002

SER 46 THR 47 0.0154

THR 47 VAL 48 -0.0001

VAL 48 GLY 49 -0.0621

GLY 49 VAL 50 -0.0002

VAL 50 VAL 51 -0.0282

VAL 51 GLU 52 -0.0003

GLU 52 SER 53 -0.0811

SER 53 GLN 54 -0.0000

GLN 54 TYR 55 -0.0272

TYR 55 ALA 56 -0.0003

ALA 56 ILE 57 -0.0482

ILE 57 ARG 58 0.0003

ARG 58 LYS 59 -0.0215

LYS 59 ASN 60 0.0000

ASN 60 GLN 61 -0.0561

GLN 61 LEU 62 0.0001

LEU 62 VAL 63 -0.1212

VAL 63 SER 64 -0.0001

SER 64 ILE 65 -0.0044

ILE 65 SER 66 -0.0000

SER 66 GLU 67 0.0375

GLU 67 GLN 68 0.0003

GLN 68 GLN 69 -0.0562

GLN 69 MET 70 -0.0001

MET 70 VAL 71 0.0249

VAL 71 ASP 72 0.0003

ASP 72 CYS 73 0.0861

CYS 73 SER 74 -0.0004

SER 74 THR 75 0.0394

THR 75 GLN 76 0.0004

GLN 76 ASN 77 -0.0362

ASN 77 THR 78 0.0001

THR 78 GLY 79 -0.0338

GLY 79 CYS 80 -0.0000

CYS 80 TYR 81 -0.0079

TYR 81 GLY 82 -0.0001

GLY 82 GLY 83 -0.0591

GLY 83 PHE 84 -0.0003

PHE 84 ILE 85 -0.0269

ILE 85 PRO 86 -0.0005

PRO 86 LEU 87 0.0549

LEU 87 ALA 88 -0.0002

ALA 88 PHE 89 -0.0165

PHE 89 GLU 90 0.0003

GLU 90 ASP 91 0.0617

ASP 91 MET 92 0.0001

MET 92 ILE 93 -0.0205

ILE 93 GLU 94 0.0001

GLU 94 MET 95 0.0639

MET 95 GLY 96 -0.0001

GLY 96 GLY 97 -0.0145

GLY 97 LEU 98 -0.0001

LEU 98 CYS 99 0.0190

CYS 99 SER 100 -0.0000

SER 100 SER 101 -0.0123

SER 101 GLU 102 0.0002

GLU 102 ASP 103 -0.0345

ASP 103 TYR 104 -0.0000

TYR 104 PRO 105 -0.0778

PRO 105 TYR 106 0.0003

TYR 106 VAL 107 -0.0850

VAL 107 ALA 108 -0.0002

ALA 108 ASP 109 0.0208

ASP 109 ILE 110 0.0001

ILE 110 PRO 111 0.0597

PRO 111 GLU 112 0.0001

GLU 112 MET 113 0.0972

MET 113 CYS 114 0.0001

CYS 114 LYS 115 0.0126

LYS 115 PHE 116 -0.0000

PHE 116 ASP 117 0.0032

ASP 117 ILE 118 -0.0001

ILE 118 CYS 119 0.0019

CYS 119 GLU 120 0.0002

GLU 120 GLN 121 0.0145

GLN 121 LYS 122 0.0002

LYS 122 TYR 123 0.0394

TYR 123 LYS 124 0.0001

LYS 124 ILE 125 0.0568

ILE 125 ASN 126 -0.0002

ASN 126 ASN 127 0.0623

ASN 127 PHE 128 -0.0001

PHE 128 LEU 129 0.0692

LEU 129 GLU 130 -0.0000

GLU 130 ILE 131 0.0710

ILE 131 PRO 132 0.0000

PRO 132 GLU 133 0.0114

GLU 133 ASP 134 -0.0000

ASP 134 LYS 135 0.0096

LYS 135 PHE 136 0.0001

PHE 136 LYS 137 -0.0129

LYS 137 GLU 138 -0.0001

GLU 138 ALA 139 -0.0215

ALA 139 ILE 140 0.0001

ILE 140 ARG 141 0.0297

ARG 141 PHE 142 -0.0002

PHE 142 LEU 143 -0.0256

LEU 143 GLY 144 -0.0001

GLY 144 PRO 145 0.0382

PRO 145 LEU 146 -0.0001

LEU 146 SER 147 -0.0046

SER 147 VAL 148 -0.0000

VAL 148 SER 149 -0.0124

SER 149 ILE 150 0.0003

ILE 150 ALA 151 0.0008

ALA 151 VAL 152 0.0000

VAL 152 SER 153 -0.0094

SER 153 ASP 154 -0.0003

ASP 154 ASP 155 0.0201

ASP 155 PHE 156 0.0004

PHE 156 ALA 157 -0.0155

ALA 157 PHE 158 0.0002

PHE 158 TYR 159 0.0500

TYR 159 ARG 160 0.0003

ARG 160 GLY 161 0.0279

GLY 161 GLY 162 -0.0001

GLY 162 ILE 163 -0.0321

ILE 163 PHE 164 0.0000

PHE 164 ASP 165 0.0014

ASP 165 GLY 166 0.0002

GLY 166 GLU 167 0.0547

GLU 167 CYS 168 -0.0001

CYS 168 GLY 169 0.0169

GLY 169 GLU 170 -0.0003

GLU 170 ALA 171 0.0184

ALA 171 PRO 172 0.0004

PRO 172 ASN 173 0.0147

ASN 173 HSP 174 -0.0001

HSP 174 ALA 175 0.0135

ALA 175 VAL 176 0.0000

VAL 176 ILE 177 0.0252

ILE 177 LEU 178 0.0001

LEU 178 VAL 179 0.0150

VAL 179 GLY 180 -0.0000

GLY 180 PHE 181 -0.0879

PHE 181 GLY 182 0.0001

GLY 182 ALA 183 -0.0064

ALA 183 GLU 184 -0.0000

GLU 184 ASP 185 0.1402

ASP 185 ALA 186 -0.0000

ALA 186 TYR 187 0.0406

TYR 187 ASP 188 0.0000

ASP 188 PHE 189 -0.0169

PHE 189 ASP 190 0.0000

ASP 190 THR 191 0.0292

THR 191 LYS 192 0.0001

LYS 192 THR 193 0.0505

THR 193 MET 194 0.0001

MET 194 LYS 195 -0.1725

LYS 195 LYS 196 0.0001

LYS 196 ARG 197 -0.3252

ARG 197 TYR 198 0.0001

TYR 198 TYR 199 -0.1872

TYR 199 TYR 200 0.0003

TYR 200 ILE 201 -0.0305

ILE 201 VAL 202 -0.0001

VAL 202 LYS 203 -0.0719

LYS 203 ASN 204 -0.0002

ASN 204 SER 205 -0.0543

SER 205 TRP 206 -0.0001

TRP 206 GLY 207 0.0158

GLY 207 VAL 208 -0.0002

VAL 208 SER 209 -0.0544

SER 209 TRP 210 -0.0001

TRP 210 GLY 211 -0.0178

GLY 211 GLU 212 -0.0001

GLU 212 LYS 213 -0.0519

LYS 213 GLY 214 0.0001

GLY 214 PHE 215 -0.0308

PHE 215 ILE 216 0.0002

ILE 216 ARG 217 -0.0228

ARG 217 LEU 218 -0.0003

LEU 218 GLU 219 -0.0897

GLU 219 THR 220 0.0003

THR 220 ASP 221 -0.0197

ASP 221 ILE 222 0.0002

ILE 222 ASN 223 -0.0424

ASN 223 GLY 224 0.0003

GLY 224 TYR 225 0.0735

TYR 225 ARG 226 -0.0000

ARG 226 LYS 227 -0.0320

LYS 227 PRO 228 0.0001

PRO 228 CYS 229 0.0013

CYS 229 SER 230 0.0004

SER 230 LEU 231 -0.0048

LEU 231 GLY 232 0.0001

GLY 232 THR 233 -0.0122

THR 233 GLU 234 0.0001

GLU 234 ALA 235 -0.0036

ALA 235 LEU 236 -0.0000

LEU 236 VAL 237 -0.0053

VAL 237 ALA 238 0.0001

ALA 238 LEU 239 -0.0043

LEU 239 VAL 240 -0.0001

VAL 240 ASP 241 0.0101

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 16 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *