Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 14 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 0.0001

ASN 2 TYR 3 -0.0026

TYR 3 GLU 4 -0.0002

GLU 4 ASP 5 0.0122

ASP 5 VAL 6 0.0004

VAL 6 ILE 7 -0.0068

ILE 7 ASP 8 0.0003

ASP 8 LYS 9 0.0428

LYS 9 TYR 10 -0.0003

TYR 10 LYS 11 0.0691

LYS 11 PRO 12 0.0001

PRO 12 LYS 13 -0.0801

LYS 13 ASP 14 0.0003

ASP 14 ALA 15 0.1284

ALA 15 THR 16 -0.0001

THR 16 PHE 17 0.0345

PHE 17 ASP 18 0.0000

ASP 18 HSP 19 -0.0782

HSP 19 ALA 20 0.0001

ALA 20 SER 21 0.2304

SER 21 TYR 22 -0.0001

TYR 22 ASP 23 -0.1591

ASP 23 TRP 24 -0.0003

TRP 24 ARG 25 -0.0306

ARG 25 LEU 26 -0.0002

LEU 26 HSP 27 0.0494

HSP 27 LYS 28 -0.0004

LYS 28 GLY 29 -0.0429

GLY 29 VAL 30 -0.0000

VAL 30 THR 31 0.0104

THR 31 PRO 32 0.0002

PRO 32 VAL 33 -0.0233

VAL 33 LYS 34 0.0003

LYS 34 ASP 35 0.0328

ASP 35 GLN 36 -0.0002

GLN 36 ALA 37 0.1157

ALA 37 ASN 38 0.0000

ASN 38 CYS 39 0.1131

CYS 39 GLY 40 -0.0001

GLY 40 SER 41 0.0182

SER 41 CYM 42 0.0001

CYM 42 TRP 43 0.0171

TRP 43 ALA 44 -0.0000

ALA 44 PHE 45 0.0336

PHE 45 SER 46 -0.0002

SER 46 THR 47 -0.0070

THR 47 VAL 48 -0.0002

VAL 48 GLY 49 0.0261

GLY 49 VAL 50 0.0001

VAL 50 VAL 51 0.0182

VAL 51 GLU 52 0.0002

GLU 52 SER 53 0.0588

SER 53 GLN 54 0.0004

GLN 54 TYR 55 0.0314

TYR 55 ALA 56 0.0001

ALA 56 ILE 57 0.0346

ILE 57 ARG 58 -0.0003

ARG 58 LYS 59 0.0354

LYS 59 ASN 60 0.0003

ASN 60 GLN 61 0.0722

GLN 61 LEU 62 0.0003

LEU 62 VAL 63 0.3142

VAL 63 SER 64 -0.0003

SER 64 ILE 65 0.0577

ILE 65 SER 66 -0.0001

SER 66 GLU 67 -0.0531

GLU 67 GLN 68 0.0000

GLN 68 GLN 69 -0.0172

GLN 69 MET 70 -0.0002

MET 70 VAL 71 -0.0285

VAL 71 ASP 72 0.0002

ASP 72 CYS 73 -0.0826

CYS 73 SER 74 -0.0000

SER 74 THR 75 -0.0177

THR 75 GLN 76 0.0005

GLN 76 ASN 77 0.0287

ASN 77 THR 78 0.0001

THR 78 GLY 79 -0.0110

GLY 79 CYS 80 0.0002

CYS 80 TYR 81 -0.0170

TYR 81 GLY 82 0.0001

GLY 82 GLY 83 0.0102

GLY 83 PHE 84 0.0001

PHE 84 ILE 85 -0.0120

ILE 85 PRO 86 0.0002

PRO 86 LEU 87 -0.0701

LEU 87 ALA 88 -0.0004

ALA 88 PHE 89 0.0051

PHE 89 GLU 90 0.0001

GLU 90 ASP 91 -0.0495

ASP 91 MET 92 0.0001

MET 92 ILE 93 0.0029

ILE 93 GLU 94 -0.0000

GLU 94 MET 95 -0.0300

MET 95 GLY 96 -0.0002

GLY 96 GLY 97 -0.0003

GLY 97 LEU 98 0.0004

LEU 98 CYS 99 0.0171

CYS 99 SER 100 0.0002

SER 100 SER 101 0.0116

SER 101 GLU 102 0.0002

GLU 102 ASP 103 -0.0132

ASP 103 TYR 104 0.0003

TYR 104 PRO 105 0.1413

PRO 105 TYR 106 0.0002

TYR 106 VAL 107 0.0555

VAL 107 ALA 108 -0.0001

ALA 108 ASP 109 0.0815

ASP 109 ILE 110 0.0001

ILE 110 PRO 111 -0.0750

PRO 111 GLU 112 0.0002

GLU 112 MET 113 -0.0671

MET 113 CYS 114 -0.0003

CYS 114 LYS 115 -0.0229

LYS 115 PHE 116 0.0000

PHE 116 ASP 117 -0.0110

ASP 117 ILE 118 0.0004

ILE 118 CYS 119 0.0089

CYS 119 GLU 120 -0.0003

GLU 120 GLN 121 0.0161

GLN 121 LYS 122 0.0002

LYS 122 TYR 123 0.0362

TYR 123 LYS 124 0.0002

LYS 124 ILE 125 0.0311

ILE 125 ASN 126 0.0001

ASN 126 ASN 127 0.0003

ASN 127 PHE 128 0.0000

PHE 128 LEU 129 -0.0394

LEU 129 GLU 130 0.0001

GLU 130 ILE 131 -0.0646

ILE 131 PRO 132 -0.0002

PRO 132 GLU 133 0.0255

GLU 133 ASP 134 0.0001

ASP 134 LYS 135 0.0332

LYS 135 PHE 136 -0.0005

PHE 136 LYS 137 -0.0482

LYS 137 GLU 138 0.0001

GLU 138 ALA 139 0.0341

ALA 139 ILE 140 0.0002

ILE 140 ARG 141 -0.0278

ARG 141 PHE 142 0.0000

PHE 142 LEU 143 0.0226

LEU 143 GLY 144 -0.0001

GLY 144 PRO 145 -0.0164

PRO 145 LEU 146 -0.0004

LEU 146 SER 147 -0.0112

SER 147 VAL 148 -0.0001

VAL 148 SER 149 0.0237

SER 149 ILE 150 -0.0001

ILE 150 ALA 151 0.0230

ALA 151 VAL 152 -0.0003

VAL 152 SER 153 0.0265

SER 153 ASP 154 -0.0001

ASP 154 ASP 155 0.0082

ASP 155 PHE 156 -0.0002

PHE 156 ALA 157 -0.0065

ALA 157 PHE 158 -0.0002

PHE 158 TYR 159 -0.0011

TYR 159 ARG 160 0.0002

ARG 160 GLY 161 0.0286

GLY 161 GLY 162 0.0002

GLY 162 ILE 163 0.0254

ILE 163 PHE 164 0.0000

PHE 164 ASP 165 0.0006

ASP 165 GLY 166 0.0001

GLY 166 GLU 167 0.0049

GLU 167 CYS 168 0.0002

CYS 168 GLY 169 0.0086

GLY 169 GLU 170 0.0001

GLU 170 ALA 171 -0.0044

ALA 171 PRO 172 -0.0001

PRO 172 ASN 173 -0.0606

ASN 173 HSP 174 0.0002

HSP 174 ALA 175 0.0205

ALA 175 VAL 176 0.0002

VAL 176 ILE 177 -0.0214

ILE 177 LEU 178 0.0002

LEU 178 VAL 179 0.0042

VAL 179 GLY 180 0.0002

GLY 180 PHE 181 0.1305

PHE 181 GLY 182 0.0002

GLY 182 ALA 183 0.0423

ALA 183 GLU 184 -0.0001

GLU 184 ASP 185 -0.0562

ASP 185 ALA 186 -0.0003

ALA 186 TYR 187 0.0952

TYR 187 ASP 188 -0.0002

ASP 188 PHE 189 0.0152

PHE 189 ASP 190 0.0002

ASP 190 THR 191 0.0005

THR 191 LYS 192 0.0000

LYS 192 THR 193 -0.0528

THR 193 MET 194 0.0001

MET 194 LYS 195 -0.1486

LYS 195 LYS 196 -0.0003

LYS 196 ARG 197 -0.2068

ARG 197 TYR 198 0.0001

TYR 198 TYR 199 -0.0070

TYR 199 TYR 200 -0.0001

TYR 200 ILE 201 0.0106

ILE 201 VAL 202 0.0002

VAL 202 LYS 203 0.0610

LYS 203 ASN 204 -0.0001

ASN 204 SER 205 0.0338

SER 205 TRP 206 -0.0004

TRP 206 GLY 207 -0.0028

GLY 207 VAL 208 0.0002

VAL 208 SER 209 0.0411

SER 209 TRP 210 0.0002

TRP 210 GLY 211 0.0405

GLY 211 GLU 212 -0.0001

GLU 212 LYS 213 0.0271

LYS 213 GLY 214 -0.0002

GLY 214 PHE 215 0.0401

PHE 215 ILE 216 -0.0000

ILE 216 ARG 217 0.0614

ARG 217 LEU 218 0.0003

LEU 218 GLU 219 -0.0166

GLU 219 THR 220 -0.0003

THR 220 ASP 221 0.0254

ASP 221 ILE 222 -0.0000

ILE 222 ASN 223 -0.0089

ASN 223 GLY 224 -0.0000

GLY 224 TYR 225 0.0243

TYR 225 ARG 226 -0.0002

ARG 226 LYS 227 -0.0170

LYS 227 PRO 228 -0.0002

PRO 228 CYS 229 -0.0435

CYS 229 SER 230 -0.0001

SER 230 LEU 231 0.0360

LEU 231 GLY 232 -0.0003

GLY 232 THR 233 0.0069

THR 233 GLU 234 0.0002

GLU 234 ALA 235 0.0059

ALA 235 LEU 236 -0.0000

LEU 236 VAL 237 0.0072

VAL 237 ALA 238 0.0000

ALA 238 LEU 239 -0.0033

LEU 239 VAL 240 0.0002

VAL 240 ASP 241 0.0422

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 14 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *