Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 13 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0001

ASN 2 TYR 3 0.0132

TYR 3 GLU 4 0.0000

GLU 4 ASP 5 -0.0076

ASP 5 VAL 6 0.0003

VAL 6 ILE 7 0.0190

ILE 7 ASP 8 -0.0003

ASP 8 LYS 9 0.0347

LYS 9 TYR 10 0.0004

TYR 10 LYS 11 0.0928

LYS 11 PRO 12 -0.0000

PRO 12 LYS 13 -0.2264

LYS 13 ASP 14 0.0000

ASP 14 ALA 15 0.1160

ALA 15 THR 16 0.0000

THR 16 PHE 17 0.0405

PHE 17 ASP 18 -0.0001

ASP 18 HSP 19 -0.1744

HSP 19 ALA 20 -0.0001

ALA 20 SER 21 0.2118

SER 21 TYR 22 0.0002

TYR 22 ASP 23 -0.1135

ASP 23 TRP 24 -0.0001

TRP 24 ARG 25 -0.0235

ARG 25 LEU 26 -0.0005

LEU 26 HSP 27 0.0187

HSP 27 LYS 28 -0.0003

LYS 28 GLY 29 0.0406

GLY 29 VAL 30 -0.0005

VAL 30 THR 31 0.0319

THR 31 PRO 32 0.0001

PRO 32 VAL 33 0.0292

VAL 33 LYS 34 0.0001

LYS 34 ASP 35 0.0556

ASP 35 GLN 36 -0.0001

GLN 36 ALA 37 -0.0556

ALA 37 ASN 38 0.0005

ASN 38 CYS 39 -0.0520

CYS 39 GLY 40 0.0002

GLY 40 SER 41 -0.0094

SER 41 CYM 42 -0.0000

CYM 42 TRP 43 0.0041

TRP 43 ALA 44 -0.0004

ALA 44 PHE 45 -0.0325

PHE 45 SER 46 -0.0001

SER 46 THR 47 0.0092

THR 47 VAL 48 0.0001

VAL 48 GLY 49 -0.0444

GLY 49 VAL 50 -0.0001

VAL 50 VAL 51 -0.0169

VAL 51 GLU 52 -0.0003

GLU 52 SER 53 -0.0415

SER 53 GLN 54 0.0001

GLN 54 TYR 55 -0.0283

TYR 55 ALA 56 0.0000

ALA 56 ILE 57 -0.0353

ILE 57 ARG 58 0.0003

ARG 58 LYS 59 -0.0248

LYS 59 ASN 60 -0.0001

ASN 60 GLN 61 0.0169

GLN 61 LEU 62 0.0002

LEU 62 VAL 63 0.0326

VAL 63 SER 64 -0.0002

SER 64 ILE 65 0.0127

ILE 65 SER 66 0.0002

SER 66 GLU 67 0.0250

GLU 67 GLN 68 -0.0004

GLN 68 GLN 69 -0.0329

GLN 69 MET 70 -0.0001

MET 70 VAL 71 0.0188

VAL 71 ASP 72 0.0003

ASP 72 CYS 73 0.0428

CYS 73 SER 74 0.0002

SER 74 THR 75 0.0133

THR 75 GLN 76 -0.0001

GLN 76 ASN 77 -0.0206

ASN 77 THR 78 -0.0001

THR 78 GLY 79 -0.0200

GLY 79 CYS 80 -0.0001

CYS 80 TYR 81 -0.0033

TYR 81 GLY 82 -0.0003

GLY 82 GLY 83 -0.0225

GLY 83 PHE 84 0.0006

PHE 84 ILE 85 -0.0048

ILE 85 PRO 86 0.0001

PRO 86 LEU 87 0.0328

LEU 87 ALA 88 -0.0003

ALA 88 PHE 89 0.0065

PHE 89 GLU 90 0.0003

GLU 90 ASP 91 0.0350

ASP 91 MET 92 -0.0000

MET 92 ILE 93 -0.0124

ILE 93 GLU 94 0.0002

GLU 94 MET 95 0.0318

MET 95 GLY 96 -0.0000

GLY 96 GLY 97 -0.0095

GLY 97 LEU 98 0.0002

LEU 98 CYS 99 0.0066

CYS 99 SER 100 0.0001

SER 100 SER 101 -0.0063

SER 101 GLU 102 0.0001

GLU 102 ASP 103 -0.0210

ASP 103 TYR 104 0.0003

TYR 104 PRO 105 -0.0169

PRO 105 TYR 106 0.0001

TYR 106 VAL 107 -0.0304

VAL 107 ALA 108 -0.0002

ALA 108 ASP 109 0.0149

ASP 109 ILE 110 0.0003

ILE 110 PRO 111 0.0338

PRO 111 GLU 112 0.0003

GLU 112 MET 113 0.0388

MET 113 CYS 114 -0.0000

CYS 114 LYS 115 -0.0063

LYS 115 PHE 116 -0.0001

PHE 116 ASP 117 -0.0026

ASP 117 ILE 118 -0.0002

ILE 118 CYS 119 0.0091

CYS 119 GLU 120 -0.0005

GLU 120 GLN 121 0.0214

GLN 121 LYS 122 -0.0002

LYS 122 TYR 123 0.0461

TYR 123 LYS 124 -0.0001

LYS 124 ILE 125 0.0357

ILE 125 ASN 126 0.0001

ASN 126 ASN 127 0.0223

ASN 127 PHE 128 0.0003

PHE 128 LEU 129 0.0348

LEU 129 GLU 130 -0.0002

GLU 130 ILE 131 0.0465

ILE 131 PRO 132 0.0003

PRO 132 GLU 133 0.0033

GLU 133 ASP 134 -0.0003

ASP 134 LYS 135 -0.0430

LYS 135 PHE 136 -0.0001

PHE 136 LYS 137 0.0321

LYS 137 GLU 138 0.0001

GLU 138 ALA 139 -0.0398

ALA 139 ILE 140 -0.0004

ILE 140 ARG 141 -0.0011

ARG 141 PHE 142 -0.0001

PHE 142 LEU 143 -0.0305

LEU 143 GLY 144 0.0002

GLY 144 PRO 145 0.0089

PRO 145 LEU 146 0.0000

LEU 146 SER 147 -0.0149

SER 147 VAL 148 -0.0000

VAL 148 SER 149 -0.0135

SER 149 ILE 150 -0.0001

ILE 150 ALA 151 -0.0093

ALA 151 VAL 152 -0.0002

VAL 152 SER 153 -0.0149

SER 153 ASP 154 0.0003

ASP 154 ASP 155 -0.0069

ASP 155 PHE 156 0.0001

PHE 156 ALA 157 -0.0015

ALA 157 PHE 158 0.0001

PHE 158 TYR 159 -0.0038

TYR 159 ARG 160 -0.0001

ARG 160 GLY 161 -0.0225

GLY 161 GLY 162 0.0002

GLY 162 ILE 163 -0.0268

ILE 163 PHE 164 -0.0001

PHE 164 ASP 165 -0.0036

ASP 165 GLY 166 0.0002

GLY 166 GLU 167 -0.0013

GLU 167 CYS 168 -0.0000

CYS 168 GLY 169 -0.0047

GLY 169 GLU 170 -0.0002

GLU 170 ALA 171 0.0068

ALA 171 PRO 172 0.0000

PRO 172 ASN 173 0.0205

ASN 173 HSP 174 -0.0001

HSP 174 ALA 175 0.0067

ALA 175 VAL 176 0.0001

VAL 176 ILE 177 0.0103

ILE 177 LEU 178 0.0002

LEU 178 VAL 179 0.0062

VAL 179 GLY 180 -0.0000

GLY 180 PHE 181 -0.1049

PHE 181 GLY 182 -0.0001

GLY 182 ALA 183 -0.0701

ALA 183 GLU 184 -0.0000

GLU 184 ASP 185 0.0717

ASP 185 ALA 186 0.0004

ALA 186 TYR 187 -0.1494

TYR 187 ASP 188 0.0001

ASP 188 PHE 189 -0.0270

PHE 189 ASP 190 0.0001

ASP 190 THR 191 0.0131

THR 191 LYS 192 0.0000

LYS 192 THR 193 0.0802

THR 193 MET 194 -0.0005

MET 194 LYS 195 0.1319

LYS 195 LYS 196 0.0004

LYS 196 ARG 197 0.1310

ARG 197 TYR 198 0.0002

TYR 198 TYR 199 -0.0200

TYR 199 TYR 200 0.0000

TYR 200 ILE 201 -0.0004

ILE 201 VAL 202 0.0001

VAL 202 LYS 203 -0.0654

LYS 203 ASN 204 0.0003

ASN 204 SER 205 -0.0346

SER 205 TRP 206 -0.0001

TRP 206 GLY 207 0.0126

GLY 207 VAL 208 -0.0004

VAL 208 SER 209 -0.0361

SER 209 TRP 210 -0.0001

TRP 210 GLY 211 -0.0369

GLY 211 GLU 212 0.0002

GLU 212 LYS 213 -0.0382

LYS 213 GLY 214 -0.0000

GLY 214 PHE 215 -0.0360

PHE 215 ILE 216 0.0001

ILE 216 ARG 217 -0.0586

ARG 217 LEU 218 -0.0003

LEU 218 GLU 219 0.0005

GLU 219 THR 220 -0.0002

THR 220 ASP 221 -0.0151

ASP 221 ILE 222 0.0003

ILE 222 ASN 223 0.0149

ASN 223 GLY 224 -0.0001

GLY 224 TYR 225 -0.0236

TYR 225 ARG 226 0.0001

ARG 226 LYS 227 0.0063

LYS 227 PRO 228 0.0000

PRO 228 CYS 229 0.0259

CYS 229 SER 230 -0.0001

SER 230 LEU 231 -0.0194

LEU 231 GLY 232 0.0000

GLY 232 THR 233 -0.0092

THR 233 GLU 234 -0.0002

GLU 234 ALA 235 -0.0059

ALA 235 LEU 236 0.0002

LEU 236 VAL 237 0.0056

VAL 237 ALA 238 -0.0000

ALA 238 LEU 239 0.0245

LEU 239 VAL 240 -0.0003

VAL 240 ASP 241 0.0388

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 13 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *