Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 12 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 0.0000

ASN 2 TYR 3 0.0121

TYR 3 GLU 4 -0.0000

GLU 4 ASP 5 -0.0391

ASP 5 VAL 6 0.0001

VAL 6 ILE 7 0.0082

ILE 7 ASP 8 -0.0004

ASP 8 LYS 9 0.0118

LYS 9 TYR 10 0.0001

TYR 10 LYS 11 -0.0619

LYS 11 PRO 12 0.0004

PRO 12 LYS 13 0.1132

LYS 13 ASP 14 0.0001

ASP 14 ALA 15 -0.0223

ALA 15 THR 16 0.0003

THR 16 PHE 17 -0.0104

PHE 17 ASP 18 -0.0000

ASP 18 HSP 19 0.1372

HSP 19 ALA 20 -0.0000

ALA 20 SER 21 0.0422

SER 21 TYR 22 -0.0002

TYR 22 ASP 23 -0.1140

ASP 23 TRP 24 0.0001

TRP 24 ARG 25 -0.0279

ARG 25 LEU 26 -0.0002

LEU 26 HSP 27 0.0165

HSP 27 LYS 28 -0.0003

LYS 28 GLY 29 0.0383

GLY 29 VAL 30 -0.0002

VAL 30 THR 31 -0.0151

THR 31 PRO 32 -0.0002

PRO 32 VAL 33 -0.0206

VAL 33 LYS 34 -0.0001

LYS 34 ASP 35 0.2696

ASP 35 GLN 36 -0.0000

GLN 36 ALA 37 0.0829

ALA 37 ASN 38 -0.0003

ASN 38 CYS 39 0.0305

CYS 39 GLY 40 0.0001

GLY 40 SER 41 -0.0106

SER 41 CYM 42 -0.0000

CYM 42 TRP 43 -0.0077

TRP 43 ALA 44 -0.0002

ALA 44 PHE 45 -0.0045

PHE 45 SER 46 -0.0000

SER 46 THR 47 0.0026

THR 47 VAL 48 -0.0002

VAL 48 GLY 49 -0.0153

GLY 49 VAL 50 -0.0003

VAL 50 VAL 51 0.0098

VAL 51 GLU 52 0.0003

GLU 52 SER 53 -0.0383

SER 53 GLN 54 -0.0002

GLN 54 TYR 55 -0.0045

TYR 55 ALA 56 0.0003

ALA 56 ILE 57 -0.0722

ILE 57 ARG 58 0.0001

ARG 58 LYS 59 -0.0014

LYS 59 ASN 60 -0.0002

ASN 60 GLN 61 -0.0239

GLN 61 LEU 62 0.0000

LEU 62 VAL 63 0.0745

VAL 63 SER 64 0.0002

SER 64 ILE 65 0.0330

ILE 65 SER 66 0.0001

SER 66 GLU 67 -0.0070

GLU 67 GLN 68 -0.0002

GLN 68 GLN 69 -0.0191

GLN 69 MET 70 -0.0002

MET 70 VAL 71 -0.0080

VAL 71 ASP 72 -0.0000

ASP 72 CYS 73 -0.0016

CYS 73 SER 74 0.0002

SER 74 THR 75 0.0133

THR 75 GLN 76 0.0000

GLN 76 ASN 77 -0.0079

ASN 77 THR 78 -0.0000

THR 78 GLY 79 -0.0112

GLY 79 CYS 80 0.0002

CYS 80 TYR 81 0.0052

TYR 81 GLY 82 -0.0004

GLY 82 GLY 83 -0.0114

GLY 83 PHE 84 0.0000

PHE 84 ILE 85 -0.0002

ILE 85 PRO 86 -0.0003

PRO 86 LEU 87 0.0242

LEU 87 ALA 88 0.0000

ALA 88 PHE 89 -0.0138

PHE 89 GLU 90 -0.0004

GLU 90 ASP 91 0.0192

ASP 91 MET 92 0.0004

MET 92 ILE 93 -0.0027

ILE 93 GLU 94 -0.0001

GLU 94 MET 95 0.0153

MET 95 GLY 96 -0.0000

GLY 96 GLY 97 0.0029

GLY 97 LEU 98 0.0002

LEU 98 CYS 99 0.0188

CYS 99 SER 100 0.0001

SER 100 SER 101 0.0106

SER 101 GLU 102 0.0003

GLU 102 ASP 103 -0.0047

ASP 103 TYR 104 -0.0001

TYR 104 PRO 105 0.0179

PRO 105 TYR 106 -0.0000

TYR 106 VAL 107 -0.0046

VAL 107 ALA 108 -0.0001

ALA 108 ASP 109 0.0172

ASP 109 ILE 110 0.0004

ILE 110 PRO 111 -0.0033

PRO 111 GLU 112 -0.0001

GLU 112 MET 113 0.0021

MET 113 CYS 114 0.0002

CYS 114 LYS 115 0.0049

LYS 115 PHE 116 -0.0003

PHE 116 ASP 117 -0.0051

ASP 117 ILE 118 -0.0004

ILE 118 CYS 119 -0.0126

CYS 119 GLU 120 0.0002

GLU 120 GLN 121 -0.0035

GLN 121 LYS 122 -0.0003

LYS 122 TYR 123 0.0100

TYR 123 LYS 124 0.0000

LYS 124 ILE 125 0.0520

ILE 125 ASN 126 -0.0003

ASN 126 ASN 127 0.0373

ASN 127 PHE 128 -0.0000

PHE 128 LEU 129 0.0393

LEU 129 GLU 130 -0.0001

GLU 130 ILE 131 0.0549

ILE 131 PRO 132 0.0000

PRO 132 GLU 133 -0.0402

GLU 133 ASP 134 -0.0002

ASP 134 LYS 135 -0.0300

LYS 135 PHE 136 -0.0002

PHE 136 LYS 137 0.0272

LYS 137 GLU 138 -0.0002

GLU 138 ALA 139 -0.0071

ALA 139 ILE 140 0.0003

ILE 140 ARG 141 -0.0029

ARG 141 PHE 142 0.0002

PHE 142 LEU 143 -0.0158

LEU 143 GLY 144 -0.0001

GLY 144 PRO 145 0.0174

PRO 145 LEU 146 -0.0001

LEU 146 SER 147 0.0036

SER 147 VAL 148 -0.0001

VAL 148 SER 149 -0.0152

SER 149 ILE 150 -0.0001

ILE 150 ALA 151 -0.0102

ALA 151 VAL 152 -0.0004

VAL 152 SER 153 -0.0116

SER 153 ASP 154 0.0001

ASP 154 ASP 155 -0.0026

ASP 155 PHE 156 0.0000

PHE 156 ALA 157 0.0007

ALA 157 PHE 158 -0.0000

PHE 158 TYR 159 -0.0020

TYR 159 ARG 160 -0.0002

ARG 160 GLY 161 -0.0131

GLY 161 GLY 162 0.0002

GLY 162 ILE 163 -0.0063

ILE 163 PHE 164 0.0001

PHE 164 ASP 165 0.0010

ASP 165 GLY 166 -0.0004

GLY 166 GLU 167 -0.0032

GLU 167 CYS 168 -0.0001

CYS 168 GLY 169 0.0011

GLY 169 GLU 170 -0.0001

GLU 170 ALA 171 -0.0037

ALA 171 PRO 172 -0.0000

PRO 172 ASN 173 0.0266

ASN 173 HSP 174 0.0001

HSP 174 ALA 175 -0.0125

ALA 175 VAL 176 0.0003

VAL 176 ILE 177 0.0258

ILE 177 LEU 178 0.0002

LEU 178 VAL 179 -0.0119

VAL 179 GLY 180 0.0004

GLY 180 PHE 181 -0.0867

PHE 181 GLY 182 -0.0004

GLY 182 ALA 183 0.0256

ALA 183 GLU 184 -0.0000

GLU 184 ASP 185 0.0649

ASP 185 ALA 186 -0.0003

ALA 186 TYR 187 0.0544

TYR 187 ASP 188 0.0002

ASP 188 PHE 189 0.0039

PHE 189 ASP 190 -0.0001

ASP 190 THR 191 -0.0022

THR 191 LYS 192 -0.0001

LYS 192 THR 193 -0.0001

THR 193 MET 194 0.0000

MET 194 LYS 195 0.0340

LYS 195 LYS 196 -0.0003

LYS 196 ARG 197 0.0918

ARG 197 TYR 198 -0.0005

TYR 198 TYR 199 -0.0204

TYR 199 TYR 200 0.0004

TYR 200 ILE 201 -0.0376

ILE 201 VAL 202 -0.0004

VAL 202 LYS 203 -0.0677

LYS 203 ASN 204 0.0000

ASN 204 SER 205 -0.0086

SER 205 TRP 206 -0.0003

TRP 206 GLY 207 -0.0131

GLY 207 VAL 208 0.0005

VAL 208 SER 209 -0.0259

SER 209 TRP 210 0.0001

TRP 210 GLY 211 -0.0380

GLY 211 GLU 212 0.0001

GLU 212 LYS 213 0.0044

LYS 213 GLY 214 -0.0003

GLY 214 PHE 215 -0.0295

PHE 215 ILE 216 -0.0002

ILE 216 ARG 217 -0.0526

ARG 217 LEU 218 0.0000

LEU 218 GLU 219 -0.0017

GLU 219 THR 220 -0.0001

THR 220 ASP 221 -0.0202

ASP 221 ILE 222 -0.0001

ILE 222 ASN 223 -0.0087

ASN 223 GLY 224 -0.0001

GLY 224 TYR 225 -0.0213

TYR 225 ARG 226 -0.0001

ARG 226 LYS 227 0.0119

LYS 227 PRO 228 -0.0002

PRO 228 CYS 229 0.0198

CYS 229 SER 230 0.0002

SER 230 LEU 231 -0.0252

LEU 231 GLY 232 0.0000

GLY 232 THR 233 -0.0102

THR 233 GLU 234 0.0004

GLU 234 ALA 235 0.0100

ALA 235 LEU 236 0.0001

LEU 236 VAL 237 -0.0128

VAL 237 ALA 238 0.0003

ALA 238 LEU 239 -0.0193

LEU 239 VAL 240 0.0001

VAL 240 ASP 241 0.0312

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 12 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *