Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *

CA strain for 2408010529592259715

--- normal mode 11 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
THR 1 ASN 2 -0.0001

ASN 2 TYR 3 -0.0108

TYR 3 GLU 4 0.0001

GLU 4 ASP 5 -0.0010

ASP 5 VAL 6 0.0002

VAL 6 ILE 7 0.0163

ILE 7 ASP 8 0.0001

ASP 8 LYS 9 -0.0046

LYS 9 TYR 10 0.0000

TYR 10 LYS 11 -0.0595

LYS 11 PRO 12 0.0001

PRO 12 LYS 13 -0.1395

LYS 13 ASP 14 0.0002

ASP 14 ALA 15 0.0804

ALA 15 THR 16 0.0002

THR 16 PHE 17 0.0710

PHE 17 ASP 18 0.0003

ASP 18 HSP 19 -0.0259

HSP 19 ALA 20 -0.0002

ALA 20 SER 21 -0.0603

SER 21 TYR 22 0.0000

TYR 22 ASP 23 -0.0903

ASP 23 TRP 24 -0.0001

TRP 24 ARG 25 0.0322

ARG 25 LEU 26 -0.0002

LEU 26 HSP 27 -0.0618

HSP 27 LYS 28 0.0000

LYS 28 GLY 29 -0.1300

GLY 29 VAL 30 -0.0002

VAL 30 THR 31 -0.0691

THR 31 PRO 32 -0.0000

PRO 32 VAL 33 -0.1863

VAL 33 LYS 34 0.0000

LYS 34 ASP 35 -0.1047

ASP 35 GLN 36 -0.0001

GLN 36 ALA 37 -0.0366

ALA 37 ASN 38 0.0001

ASN 38 CYS 39 -0.0166

CYS 39 GLY 40 0.0003

GLY 40 SER 41 0.0025

SER 41 CYM 42 0.0001

CYM 42 TRP 43 0.0026

TRP 43 ALA 44 -0.0001

ALA 44 PHE 45 0.0051

PHE 45 SER 46 0.0003

SER 46 THR 47 0.0024

THR 47 VAL 48 0.0001

VAL 48 GLY 49 0.0094

GLY 49 VAL 50 -0.0003

VAL 50 VAL 51 0.0014

VAL 51 GLU 52 0.0001

GLU 52 SER 53 0.0092

SER 53 GLN 54 -0.0004

GLN 54 TYR 55 -0.0098

TYR 55 ALA 56 -0.0000

ALA 56 ILE 57 -0.0023

ILE 57 ARG 58 0.0002

ARG 58 LYS 59 0.0308

LYS 59 ASN 60 0.0000

ASN 60 GLN 61 -0.0263

GLN 61 LEU 62 0.0001

LEU 62 VAL 63 -0.1673

VAL 63 SER 64 -0.0003

SER 64 ILE 65 -0.0572

ILE 65 SER 66 0.0002

SER 66 GLU 67 -0.0020

GLU 67 GLN 68 -0.0003

GLN 68 GLN 69 0.0190

GLN 69 MET 70 0.0001

MET 70 VAL 71 0.0033

VAL 71 ASP 72 -0.0002

ASP 72 CYS 73 0.0148

CYS 73 SER 74 0.0000

SER 74 THR 75 -0.0063

THR 75 GLN 76 -0.0003

GLN 76 ASN 77 0.0024

ASN 77 THR 78 0.0000

THR 78 GLY 79 0.0150

GLY 79 CYS 80 0.0001

CYS 80 TYR 81 0.0010

TYR 81 GLY 82 -0.0002

GLY 82 GLY 83 0.0153

GLY 83 PHE 84 0.0001

PHE 84 ILE 85 0.0084

ILE 85 PRO 86 0.0002

PRO 86 LEU 87 0.0026

LEU 87 ALA 88 0.0002

ALA 88 PHE 89 0.0110

PHE 89 GLU 90 -0.0000

GLU 90 ASP 91 0.0023

ASP 91 MET 92 -0.0002

MET 92 ILE 93 0.0028

ILE 93 GLU 94 -0.0000

GLU 94 MET 95 -0.0025

MET 95 GLY 96 0.0004

GLY 96 GLY 97 0.0000

GLY 97 LEU 98 -0.0000

LEU 98 CYS 99 -0.0127

CYS 99 SER 100 0.0002

SER 100 SER 101 -0.0003

SER 101 GLU 102 -0.0002

GLU 102 ASP 103 0.0130

ASP 103 TYR 104 0.0000

TYR 104 PRO 105 -0.0305

PRO 105 TYR 106 -0.0001

TYR 106 VAL 107 -0.0077

VAL 107 ALA 108 -0.0000

ALA 108 ASP 109 -0.0231

ASP 109 ILE 110 0.0000

ILE 110 PRO 111 0.0126

PRO 111 GLU 112 -0.0001

GLU 112 MET 113 0.0077

MET 113 CYS 114 0.0002

CYS 114 LYS 115 0.0008

LYS 115 PHE 116 -0.0000

PHE 116 ASP 117 0.0040

ASP 117 ILE 118 0.0000

ILE 118 CYS 119 0.0034

CYS 119 GLU 120 -0.0001

GLU 120 GLN 121 -0.0023

GLN 121 LYS 122 0.0001

LYS 122 TYR 123 -0.0108

TYR 123 LYS 124 0.0004

LYS 124 ILE 125 -0.0216

ILE 125 ASN 126 -0.0004

ASN 126 ASN 127 -0.0134

ASN 127 PHE 128 0.0001

PHE 128 LEU 129 -0.0089

LEU 129 GLU 130 -0.0001

GLU 130 ILE 131 -0.0287

ILE 131 PRO 132 -0.0001

PRO 132 GLU 133 0.0141

GLU 133 ASP 134 0.0005

ASP 134 LYS 135 0.0169

LYS 135 PHE 136 0.0003

PHE 136 LYS 137 -0.0118

LYS 137 GLU 138 0.0002

GLU 138 ALA 139 0.0100

ALA 139 ILE 140 0.0001

ILE 140 ARG 141 -0.0121

ARG 141 PHE 142 0.0000

PHE 142 LEU 143 -0.0156

LEU 143 GLY 144 -0.0001

GLY 144 PRO 145 -0.0167

PRO 145 LEU 146 0.0002

LEU 146 SER 147 0.0023

SER 147 VAL 148 -0.0001

VAL 148 SER 149 0.0102

SER 149 ILE 150 -0.0000

ILE 150 ALA 151 0.0027

ALA 151 VAL 152 0.0001

VAL 152 SER 153 0.0038

SER 153 ASP 154 -0.0000

ASP 154 ASP 155 -0.0012

ASP 155 PHE 156 0.0002

PHE 156 ALA 157 0.0038

ALA 157 PHE 158 0.0002

PHE 158 TYR 159 -0.0032

TYR 159 ARG 160 -0.0000

ARG 160 GLY 161 0.0035

GLY 161 GLY 162 0.0000

GLY 162 ILE 163 -0.0042

ILE 163 PHE 164 -0.0003

PHE 164 ASP 165 -0.0014

ASP 165 GLY 166 0.0003

GLY 166 GLU 167 -0.0026

GLU 167 CYS 168 0.0002

CYS 168 GLY 169 -0.0046

GLY 169 GLU 170 -0.0002

GLU 170 ALA 171 0.0011

ALA 171 PRO 172 -0.0000

PRO 172 ASN 173 -0.0028

ASN 173 HSP 174 0.0001

HSP 174 ALA 175 0.0032

ALA 175 VAL 176 -0.0003

VAL 176 ILE 177 -0.0082

ILE 177 LEU 178 0.0001

LEU 178 VAL 179 -0.0008

VAL 179 GLY 180 0.0000

GLY 180 PHE 181 0.0342

PHE 181 GLY 182 -0.0002

GLY 182 ALA 183 -0.0117

ALA 183 GLU 184 -0.0002

GLU 184 ASP 185 -0.0412

ASP 185 ALA 186 -0.0003

ALA 186 TYR 187 -0.0281

TYR 187 ASP 188 0.0004

ASP 188 PHE 189 -0.0013

PHE 189 ASP 190 -0.0001

ASP 190 THR 191 -0.0000

THR 191 LYS 192 -0.0002

LYS 192 THR 193 -0.0029

THR 193 MET 194 0.0004

MET 194 LYS 195 -0.0116

LYS 195 LYS 196 0.0001

LYS 196 ARG 197 -0.0411

ARG 197 TYR 198 0.0003

TYR 198 TYR 199 0.0095

TYR 199 TYR 200 0.0001

TYR 200 ILE 201 0.0094

ILE 201 VAL 202 0.0000

VAL 202 LYS 203 0.0189

LYS 203 ASN 204 -0.0000

ASN 204 SER 205 0.0091

SER 205 TRP 206 0.0004

TRP 206 GLY 207 0.0038

GLY 207 VAL 208 0.0000

VAL 208 SER 209 0.0109

SER 209 TRP 210 0.0001

TRP 210 GLY 211 0.0160

GLY 211 GLU 212 0.0002

GLU 212 LYS 213 -0.0371

LYS 213 GLY 214 -0.0002

GLY 214 PHE 215 0.0054

PHE 215 ILE 216 -0.0002

ILE 216 ARG 217 0.0121

ARG 217 LEU 218 -0.0003

LEU 218 GLU 219 -0.0049

GLU 219 THR 220 -0.0001

THR 220 ASP 221 0.0034

ASP 221 ILE 222 0.0001

ILE 222 ASN 223 0.0011

ASN 223 GLY 224 -0.0001

GLY 224 TYR 225 0.0127

TYR 225 ARG 226 -0.0000

ARG 226 LYS 227 -0.0067

LYS 227 PRO 228 0.0002

PRO 228 CYS 229 -0.0080

CYS 229 SER 230 -0.0001

SER 230 LEU 231 0.0143

LEU 231 GLY 232 -0.0002

GLY 232 THR 233 0.0063

THR 233 GLU 234 0.0002

GLU 234 ALA 235 -0.0070

ALA 235 LEU 236 -0.0004

LEU 236 VAL 237 0.0081

VAL 237 ALA 238 0.0001

ALA 238 LEU 239 0.0190

LEU 239 VAL 240 0.0001

VAL 240 ASP 241 -0.0172

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** vp2-c4 ***

CA strain for 2408010529592259715

--- normal mode 11 ---

Should you encounter any unexpected behaviour,
please let us know.

* vp2-c4 *