This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.1097
VAL 2
PHE 3
-0.1052
PHE 3
GLU 4
0.0133
GLU 4
ARG 5
-0.0052
ARG 5
CYS 6
-0.0165
CYS 6
GLU 7
-0.0515
GLU 7
LEU 8
0.0287
LEU 8
ALA 9
-0.0474
ALA 9
ARG 10
0.0138
ARG 10
THR 11
0.0662
THR 11
LEU 12
-0.0487
LEU 12
LYS 13
0.0036
LYS 13
ARG 14
-0.0055
ARG 14
LEU 15
0.1141
LEU 15
GLY 16
-0.1568
GLY 16
MET 17
-0.0215
MET 17
ASP 18
0.0627
ASP 18
GLY 19
-0.0468
GLY 19
TYR 20
0.1493
TYR 20
ARG 21
-0.0698
ARG 21
GLY 22
0.0935
GLY 22
ILE 23
0.0266
ILE 23
SER 24
0.0166
SER 24
LEU 25
-0.0421
LEU 25
ALA 26
0.0651
ALA 26
ASN 27
-0.0153
ASN 27
TRP 28
0.0004
TRP 28
MET 29
0.0215
MET 29
CYS 30
0.0115
CYS 30
LEU 31
-0.0491
LEU 31
ALA 32
0.0825
ALA 32
LYS 33
-0.0208
LYS 33
TRP 34
0.0649
TRP 34
GLU 35
-0.1741
GLU 35
SER 36
0.3170
SER 36
GLY 37
-0.1539
GLY 37
TYR 38
0.0278
TYR 38
ASN 39
-0.1098
ASN 39
THR 40
0.1533
THR 40
ARG 41
-0.0619
ARG 41
ALA 42
0.0181
ALA 42
THR 43
-0.4331
THR 43
ASN 44
-0.2900
ASN 44
TYR 45
-0.1329
TYR 45
ASN 46
-0.0966
ASN 46
ALA 47
0.0779
ALA 47
GLY 48
-0.0570
GLY 48
ASP 49
0.1390
ASP 49
ARG 50
-0.0184
ARG 50
SER 51
0.0528
SER 51
THR 52
-0.1216
THR 52
ASP 53
-0.0226
ASP 53
TYR 54
0.0156
TYR 54
GLY 55
-0.1311
GLY 55
THR 56
-0.1100
THR 56
PHE 57
0.0576
PHE 57
GLN 58
0.0277
GLN 58
ILE 59
-0.2453
ILE 59
ASN 60
-0.0497
ASN 60
SER 61
-0.0013
SER 61
ARG 62
-0.1469
ARG 62
TYR 63
0.2815
TYR 63
TRP 64
0.0757
TRP 64
CYS 65
0.0557
CYS 65
ASN 66
-0.0304
ASN 66
ASP 67
-0.1053
ASP 67
GLY 68
0.0544
GLY 68
LYS 69
-0.1275
LYS 69
THR 70
0.1225
THR 70
PRO 71
-0.0155
PRO 71
GLY 72
0.0211
GLY 72
ALA 73
0.0746
ALA 73
VAL 74
0.0109
VAL 74
ASN 75
0.0993
ASN 75
ALA 76
-0.0392
ALA 76
CYS 77
0.2034
CYS 77
HIS 78
-0.0667
HIS 78
LEU 79
0.0941
LEU 79
SER 80
-0.1009
SER 80
CYS 81
-0.0408
CYS 81
SER 82
0.0267
SER 82
ALA 83
-0.1248
ALA 83
LEU 84
0.0497
LEU 84
LEU 85
0.0127
LEU 85
GLN 86
-0.1540
GLN 86
ASP 87
0.1523
ASP 87
ASN 88
0.0019
ASN 88
ILE 89
-0.0418
ILE 89
ALA 90
0.0591
ALA 90
ASP 91
0.1647
ASP 91
ALA 92
0.0069
ALA 92
VAL 93
-0.0329
VAL 93
ALA 94
0.1628
ALA 94
CYS 95
0.2137
CYS 95
ALA 96
-0.0520
ALA 96
LYS 97
0.0296
LYS 97
ARG 98
0.2735
ARG 98
VAL 99
-0.1506
VAL 99
VAL 100
0.0998
VAL 100
ARG 101
-0.0242
ARG 101
ASP 102
0.0406
ASP 102
PRO 103
0.0452
PRO 103
GLN 104
0.0015
GLN 104
GLY 105
-0.0292
GLY 105
ILE 106
-0.0191
ILE 106
ARG 107
-0.0328
ARG 107
ALA 108
-0.0774
ALA 108
TRP 109
0.0842
TRP 109
VAL 110
-0.1219
VAL 110
ALA 111
0.0773
ALA 111
TRP 112
0.0219
TRP 112
ARG 113
0.0624
ARG 113
ASN 114
-0.0519
ASN 114
ARG 115
0.0150
ARG 115
CYS 116
-0.0036
CYS 116
GLN 117
0.0173
GLN 117
ASN 118
-0.0209
ASN 118
ARG 119
-0.0129
ARG 119
ASP 120
-0.0641
ASP 120
VAL 121
0.0605
VAL 121
ARG 122
0.0596
ARG 122
GLN 123
0.0461
GLN 123
TYR 124
-0.0467
TYR 124
VAL 125
-0.0574
VAL 125
GLN 126
0.1074
GLN 126
GLY 127
-0.0622
GLY 127
CYS 128
-0.0115
CYS 128
GLY 129
-0.0344
GLY 129
VAL 130
0.0553
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.