This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0252
VAL 2
PHE 3
-0.0053
PHE 3
GLU 4
0.0502
GLU 4
ARG 5
0.0731
ARG 5
CYS 6
-0.0673
CYS 6
GLU 7
0.1173
GLU 7
LEU 8
-0.0194
LEU 8
ALA 9
0.0329
ALA 9
ARG 10
-0.0060
ARG 10
THR 11
0.1482
THR 11
LEU 12
-0.0534
LEU 12
LYS 13
0.0193
LYS 13
ARG 14
0.0070
ARG 14
LEU 15
0.0886
LEU 15
GLY 16
0.0839
GLY 16
MET 17
0.0091
MET 17
ASP 18
0.0495
ASP 18
GLY 19
-0.0412
GLY 19
TYR 20
0.0425
TYR 20
ARG 21
-0.0677
ARG 21
GLY 22
0.0069
GLY 22
ILE 23
-0.0071
ILE 23
SER 24
-0.0417
SER 24
LEU 25
-0.0023
LEU 25
ALA 26
0.1058
ALA 26
ASN 27
-0.0196
ASN 27
TRP 28
0.0531
TRP 28
MET 29
0.0276
MET 29
CYS 30
0.0706
CYS 30
LEU 31
-0.1473
LEU 31
ALA 32
0.0874
ALA 32
LYS 33
0.0297
LYS 33
TRP 34
0.0338
TRP 34
GLU 35
-0.3441
GLU 35
SER 36
0.1108
SER 36
GLY 37
-0.0730
GLY 37
TYR 38
0.0004
TYR 38
ASN 39
-0.0133
ASN 39
THR 40
-0.0032
THR 40
ARG 41
0.0341
ARG 41
ALA 42
-0.0578
ALA 42
THR 43
-0.0193
THR 43
ASN 44
0.0552
ASN 44
TYR 45
-0.0700
TYR 45
ASN 46
0.0745
ASN 46
ALA 47
-0.1029
ALA 47
GLY 48
0.0144
GLY 48
ASP 49
0.0139
ASP 49
ARG 50
0.0293
ARG 50
SER 51
-0.1033
SER 51
THR 52
0.0246
THR 52
ASP 53
-0.1648
ASP 53
TYR 54
-0.0256
TYR 54
GLY 55
0.0050
GLY 55
THR 56
0.0735
THR 56
PHE 57
-0.0086
PHE 57
GLN 58
-0.1668
GLN 58
ILE 59
-0.0624
ILE 59
ASN 60
-0.2039
ASN 60
SER 61
-0.1290
SER 61
ARG 62
0.0647
ARG 62
TYR 63
-0.0666
TYR 63
TRP 64
0.0406
TRP 64
CYS 65
-0.1043
CYS 65
ASN 66
-0.0702
ASN 66
ASP 67
-0.0098
ASP 67
GLY 68
0.0312
GLY 68
LYS 69
0.1698
LYS 69
THR 70
-0.1670
THR 70
PRO 71
0.0654
PRO 71
GLY 72
-0.0168
GLY 72
ALA 73
0.0948
ALA 73
VAL 74
-0.0101
VAL 74
ASN 75
0.0482
ASN 75
ALA 76
0.0264
ALA 76
CYS 77
0.0134
CYS 77
HIS 78
0.0810
HIS 78
LEU 79
-0.0250
LEU 79
SER 80
0.0962
SER 80
CYS 81
-0.1908
CYS 81
SER 82
0.0636
SER 82
ALA 83
0.1510
ALA 83
LEU 84
-0.1390
LEU 84
LEU 85
-0.0380
LEU 85
GLN 86
0.0401
GLN 86
ASP 87
0.1792
ASP 87
ASN 88
-0.1067
ASN 88
ILE 89
-0.0530
ILE 89
ALA 90
-0.0060
ALA 90
ASP 91
0.2472
ASP 91
ALA 92
-0.1099
ALA 92
VAL 93
0.1491
VAL 93
ALA 94
0.0641
ALA 94
CYS 95
0.0280
CYS 95
ALA 96
0.0837
ALA 96
LYS 97
-0.0300
LYS 97
ARG 98
0.0461
ARG 98
VAL 99
-0.0068
VAL 99
VAL 100
-0.1128
VAL 100
ARG 101
0.0324
ARG 101
ASP 102
-0.0527
ASP 102
PRO 103
-0.0200
PRO 103
GLN 104
0.0479
GLN 104
GLY 105
-0.0153
GLY 105
ILE 106
0.0103
ILE 106
ARG 107
0.0320
ARG 107
ALA 108
-0.1256
ALA 108
TRP 109
0.0842
TRP 109
VAL 110
-0.1137
VAL 110
ALA 111
0.0710
ALA 111
TRP 112
0.0194
TRP 112
ARG 113
0.0086
ARG 113
ASN 114
0.0171
ASN 114
ARG 115
0.0340
ARG 115
CYS 116
0.0371
CYS 116
GLN 117
0.0052
GLN 117
ASN 118
-0.0101
ASN 118
ARG 119
0.0362
ARG 119
ASP 120
0.0132
ASP 120
VAL 121
0.0254
VAL 121
ARG 122
-0.0087
ARG 122
GLN 123
0.0006
GLN 123
TYR 124
-0.0419
TYR 124
VAL 125
-0.0368
VAL 125
GLN 126
-0.0160
GLN 126
GLY 127
0.0074
GLY 127
CYS 128
0.0439
CYS 128
GLY 129
-0.0289
GLY 129
VAL 130
-0.0250
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.