CNRS Nantes University US2B US2B
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***  STRUCTURAL PROTEIN 17-JUL-23 8PUZ  ***

CA strain for 2406271123311174200

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 149GLU 150 -0.0217
GLU 150LEU 151 0.1028
LEU 151ASP 152 0.0581
ASP 152GLU 153 -0.1082
GLU 153VAL 154 -0.0193
VAL 154HIS 155 0.0209
HIS 155GLN 156 0.0793
GLN 156ALA 157 -0.2311
ALA 157LEU 158 0.1773
LEU 158GLU 159 0.1495
GLU 159ASP 160 0.1282
ASP 160LEU 161 -0.2226
LEU 161ALA 149 -0.2517
ALA 149GLU 150 -0.2122
GLU 150LEU 151 0.0769
LEU 151ASP 152 -0.0603
ASP 152GLU 153 -0.1969
GLU 153VAL 154 0.0743
VAL 154HIS 155 0.0931
HIS 155GLN 156 -0.2555
GLN 156ALA 157 -0.0308
ALA 157LEU 158 -0.0383
LEU 158GLU 159 -0.1638
GLU 159ASP 160 0.0589
ASP 160LEU 161 -0.2845
LEU 161MET 1 0.0283
MET 1ASP 2 0.0369
ASP 2LYS 3 -0.0956
LYS 3LEU 4 0.2279
LEU 4ARG 5 0.1023
ARG 5GLU 6 -0.1362
GLU 6LYS 7 -0.0061
LYS 7ILE 8 0.2094
ILE 8ASN 9 -0.1213
ASN 9ALA 10 0.1010
ALA 10ALA 11 -0.1241
ALA 11ARG 12 -0.1061
ARG 12MET 1 -0.6706
MET 1ASP 2 -0.0636
ASP 2LYS 3 -0.2272
LYS 3LEU 4 0.1974
LEU 4ARG 5 0.0724
ARG 5GLU 6 -0.2989
GLU 6LYS 7 -0.0968
LYS 7ILE 8 0.1826
ILE 8ASN 9 -0.0122
ASN 9ALA 10 -0.1565
ALA 10ALA 11 -0.2409
ALA 11ARG 12 -0.1515

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.