CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  STRUCTURAL PROTEIN 17-JUL-23 8PUZ  ***

CA strain for 2406271123311174200

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 149GLU 150 -0.0916
GLU 150LEU 151 0.1641
LEU 151ASP 152 -0.1041
ASP 152GLU 153 -0.0959
GLU 153VAL 154 0.0220
VAL 154HIS 155 -0.0588
HIS 155GLN 156 -0.1550
GLN 156ALA 157 -0.0556
ALA 157LEU 158 -0.0601
LEU 158GLU 159 0.0458
GLU 159ASP 160 -0.0388
ASP 160LEU 161 0.1726
LEU 161ALA 149 -0.1168
ALA 149GLU 150 -0.0762
GLU 150LEU 151 0.1305
LEU 151ASP 152 -0.2368
ASP 152GLU 153 0.0638
GLU 153VAL 154 -0.0538
VAL 154HIS 155 0.0442
HIS 155GLN 156 -0.0663
GLN 156ALA 157 -0.0465
ALA 157LEU 158 -0.0010
LEU 158GLU 159 0.0428
GLU 159ASP 160 0.0237
ASP 160LEU 161 0.0613
LEU 161MET 1 0.0192
MET 1ASP 2 0.0863
ASP 2LYS 3 -0.0524
LYS 3LEU 4 -0.0392
LEU 4ARG 5 0.0539
ARG 5GLU 6 -0.0273
GLU 6LYS 7 0.0534
LYS 7ILE 8 0.0142
ILE 8ASN 9 0.0606
ASN 9ALA 10 -0.0561
ALA 10ALA 11 -0.6831
ALA 11ARG 12 0.2014
ARG 12MET 1 0.1594
MET 1ASP 2 -0.1801
ASP 2LYS 3 -0.2630
LYS 3LEU 4 0.2077
LEU 4ARG 5 0.0946
ARG 5GLU 6 -0.1078
GLU 6LYS 7 -0.0064
LYS 7ILE 8 0.1717
ILE 8ASN 9 0.0064
ASN 9ALA 10 -0.1054
ALA 10ALA 11 -0.2933
ALA 11ARG 12 0.0181

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.