CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  STRUCTURAL PROTEIN 17-JUL-23 8PUZ  ***

CA strain for 2406271123311174200

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 149GLU 150 -0.1498
GLU 150LEU 151 0.1996
LEU 151ASP 152 -0.1050
ASP 152GLU 153 -0.1369
GLU 153VAL 154 0.0253
VAL 154HIS 155 -0.0801
HIS 155GLN 156 -0.0375
GLN 156ALA 157 -0.0738
ALA 157LEU 158 0.0696
LEU 158GLU 159 -0.0164
GLU 159ASP 160 0.2157
ASP 160LEU 161 0.2816
LEU 161ALA 149 -0.0143
ALA 149GLU 150 -0.1648
GLU 150LEU 151 0.1336
LEU 151ASP 152 -0.3560
ASP 152GLU 153 -0.1914
GLU 153VAL 154 0.2039
VAL 154HIS 155 0.0276
HIS 155GLN 156 -0.2804
GLN 156ALA 157 0.0180
ALA 157LEU 158 -0.0764
LEU 158GLU 159 0.0442
GLU 159ASP 160 -0.0796
ASP 160LEU 161 -0.2053
LEU 161MET 1 -0.1203
MET 1ASP 2 -0.2041
ASP 2LYS 3 0.0486
LYS 3LEU 4 0.1403
LEU 4ARG 5 0.2181
ARG 5GLU 6 -0.1662
GLU 6LYS 7 0.3442
LYS 7ILE 8 0.1103
ILE 8ASN 9 0.0852
ASN 9ALA 10 -0.0761
ALA 10ALA 11 0.0792
ALA 11ARG 12 0.0255
ARG 12MET 1 0.0432
MET 1ASP 2 -0.3396
ASP 2LYS 3 -0.2246
LYS 3LEU 4 0.1702
LEU 4ARG 5 0.1660
ARG 5GLU 6 0.1065
GLU 6LYS 7 -0.0932
LYS 7ILE 8 -0.0142
ILE 8ASN 9 -0.1147
ASN 9ALA 10 0.2537
ALA 10ALA 11 -0.0900
ALA 11ARG 12 0.4628

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.