CNRS Nantes University US2B US2B
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***  STRUCTURAL PROTEIN 17-JUL-23 8PUZ  ***

CA strain for 2406271123311174200

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 149GLU 150 -0.1321
GLU 150LEU 151 0.0841
LEU 151ASP 152 -0.1178
ASP 152GLU 153 -0.0827
GLU 153VAL 154 0.0316
VAL 154HIS 155 -0.0947
HIS 155GLN 156 -0.1853
GLN 156ALA 157 0.2329
ALA 157LEU 158 0.1321
LEU 158GLU 159 -0.1753
GLU 159ASP 160 -0.1319
ASP 160LEU 161 0.0009
LEU 161ALA 149 -0.0014
ALA 149GLU 150 0.0544
GLU 150LEU 151 0.1200
LEU 151ASP 152 0.0691
ASP 152GLU 153 0.2418
GLU 153VAL 154 -0.3825
VAL 154HIS 155 0.0684
HIS 155GLN 156 0.2250
GLN 156ALA 157 -0.1135
ALA 157LEU 158 -0.0707
LEU 158GLU 159 0.1313
GLU 159ASP 160 -0.0987
ASP 160LEU 161 0.0735
LEU 161MET 1 0.0967
MET 1ASP 2 0.4936
ASP 2LYS 3 -0.3863
LYS 3LEU 4 0.1737
LEU 4ARG 5 -0.0104
ARG 5GLU 6 -0.0521
GLU 6LYS 7 -0.1282
LYS 7ILE 8 -0.1046
ILE 8ASN 9 -0.1424
ASN 9ALA 10 0.0435
ALA 10ALA 11 -0.3574
ALA 11ARG 12 -0.1441
ARG 12MET 1 -0.5372
MET 1ASP 2 0.2982
ASP 2LYS 3 0.0393
LYS 3LEU 4 -0.0672
LEU 4ARG 5 -0.1258
ARG 5GLU 6 0.3313
GLU 6LYS 7 -0.1759
LYS 7ILE 8 0.2578
ILE 8ASN 9 0.0413
ASN 9ALA 10 0.1886
ALA 10ALA 11 -0.3312
ALA 11ARG 12 0.5409

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.