Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

CA strain for 2406080142331607873

--- normal mode 7 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ARG 6 THR 7 0.0001

THR 7 PRO 8 -0.0003

PRO 8 SER 9 -0.0456

SER 9 ASP 10 0.0002

ASP 10 LYS 11 0.0001

LYS 11 PRO 12 -0.0390

PRO 12 VAL 13 0.0002

VAL 13 ALA 14 0.0001

ALA 14 HIS 15 -0.0744

HIS 15 VAL 16 -0.0003

VAL 16 VAL 17 -0.0000

VAL 17 ALA 18 0.0307

ALA 18 ASN 19 0.0002

ASN 19 PRO 20 -0.0002

PRO 20 GLN 21 0.0966

GLN 21 ALA 22 -0.0002

ALA 22 GLU 23 0.0001

GLU 23 GLY 24 -0.0284

GLY 24 GLN 25 0.0002

GLN 25 LEU 26 -0.0003

LEU 26 GLN 27 0.0559

GLN 27 TRP 28 0.0001

TRP 28 LEU 29 0.0001

LEU 29 ASN 30 0.0582

ASN 30 ARG 31 0.0002

ARG 31 ARG 32 0.0003

ARG 32 ALA 33 0.2195

ALA 33 ASN 34 0.0002

ASN 34 ALA 35 0.0002

ALA 35 LEU 36 -0.0156

LEU 36 LEU 37 0.0001

LEU 37 ALA 38 -0.0000

ALA 38 ASN 39 -0.0713

ASN 39 GLY 40 -0.0002

GLY 40 VAL 41 0.0001

VAL 41 GLU 42 0.0012

GLU 42 LEU 43 -0.0001

LEU 43 ARG 44 0.0002

ARG 44 ASP 45 0.0167

ASP 45 ASN 46 -0.0001

ASN 46 GLN 47 0.0002

GLN 47 LEU 48 -0.0286

LEU 48 VAL 49 0.0003

VAL 49 VAL 50 -0.0000

VAL 50 PRO 51 0.0169

PRO 51 SER 52 -0.0001

SER 52 GLU 53 -0.0004

GLU 53 GLY 54 -0.0838

GLY 54 LEU 55 -0.0001

LEU 55 TYR 56 0.0005

TYR 56 LEU 57 -0.0719

LEU 57 ILE 58 0.0002

ILE 58 TYR 59 0.0001

TYR 59 SER 60 -0.0604

SER 60 GLN 61 0.0002

GLN 61 VAL 62 -0.0003

VAL 62 LEU 63 -0.0712

LEU 63 PHE 64 -0.0001

PHE 64 LYS 65 -0.0000

LYS 65 GLY 66 -0.1634

GLY 66 GLN 67 0.0002

GLN 67 GLY 68 -0.0001

GLY 68 CYS 69 0.0129

CYS 69 PRO 70 0.0001

PRO 70 SER 71 0.0000

SER 71 THR 72 -0.0326

THR 72 HIS 73 0.0001

HIS 73 VAL 74 0.0000

VAL 74 LEU 75 0.0937

LEU 75 LEU 76 -0.0002

LEU 76 THR 77 -0.0001

THR 77 HIS 78 0.2443

HIS 78 THR 79 -0.0000

THR 79 ILE 80 -0.0001

ILE 80 SER 81 0.1205

SER 81 ARG 82 -0.0002

ARG 82 ILE 83 0.0001

ILE 83 ALA 84 0.0813

ALA 84 VAL 85 0.0001

VAL 85 SER 86 0.0001

SER 86 TYR 87 0.0173

TYR 87 GLN 88 -0.0002

GLN 88 THR 89 -0.0002

THR 89 LYS 90 0.1057

LYS 90 VAL 91 0.0002

VAL 91 ASN 92 -0.0000

ASN 92 LEU 93 -0.0212

LEU 93 LEU 94 -0.0000

LEU 94 SER 95 -0.0003

SER 95 ALA 96 0.3248

ALA 96 ILE 97 -0.0001

ILE 97 LYS 98 0.0001

LYS 98 SER 99 0.1378

SER 99 PRO 100 0.0001

PRO 100 CYS 101 -0.0003

CYS 101 GLN 102 -0.0548

GLN 102 ARG 103 0.0001

ARG 103 GLU 104 0.0000

GLU 104 THR 105 0.0150

THR 105 PRO 106 -0.0002

PRO 106 GLU 107 -0.0000

GLU 107 GLY 108 0.0264

GLY 108 ALA 109 -0.0001

ALA 109 GLU 110 0.0000

GLU 110 ALA 111 -0.0358

ALA 111 LYS 112 0.0003

LYS 112 PRO 113 -0.0002

PRO 113 TRP 114 0.0179

TRP 114 TYR 115 -0.0001

TYR 115 GLU 116 0.0003

GLU 116 PRO 117 -0.0377

PRO 117 ILE 118 -0.0001

ILE 118 TYR 119 0.0002

TYR 119 LEU 120 -0.0068

LEU 120 GLY 121 -0.0001

GLY 121 GLY 122 0.0002

GLY 122 VAL 123 -0.0598

VAL 123 PHE 124 0.0003

PHE 124 GLN 125 0.0000

GLN 125 LEU 126 -0.0159

LEU 126 GLU 127 -0.0004

GLU 127 LYS 128 0.0005

LYS 128 GLY 129 -0.0213

GLY 129 ASP 130 -0.0003

ASP 130 ARG 131 0.0000

ARG 131 LEU 132 0.0584

LEU 132 SER 133 0.0002

SER 133 ALA 134 -0.0000

ALA 134 GLU 135 0.1229

GLU 135 ILE 136 0.0003

ILE 136 ASN 137 -0.0001

ASN 137 ARG 138 0.0164

ARG 138 PRO 139 0.0003

PRO 139 ASP 140 0.0001

ASP 140 TYR 141 0.0213

TYR 141 LEU 142 0.0003

LEU 142 LEU 143 0.0001

LEU 143 PHE 144 -0.0858

PHE 144 ALA 145 0.0002

ALA 145 GLU 146 0.0001

GLU 146 SER 147 -0.1713

SER 147 GLY 148 0.0002

GLY 148 GLN 149 -0.0002

GLN 149 VAL 150 0.0205

VAL 150 TYR 151 -0.0002

TYR 151 PHE 152 0.0001

PHE 152 GLY 153 -0.0347

GLY 153 ILE 154 -0.0000

ILE 154 ILE 155 0.0001

ILE 155 ALA 156 -0.0383

ALA 156 LEU 157 0.0001

LEU 157 ARG 6 -0.2829

ARG 6 THR 7 -0.0004

THR 7 PRO 8 0.0000

PRO 8 SER 9 -0.2295

SER 9 ASP 10 -0.0002

ASP 10 LYS 11 0.0004

LYS 11 PRO 12 -0.0218

PRO 12 VAL 13 -0.0003

VAL 13 ALA 14 0.0001

ALA 14 HIS 15 0.0294

HIS 15 VAL 16 0.0003

VAL 16 VAL 17 -0.0004

VAL 17 ALA 18 0.1125

ALA 18 ASN 19 -0.0002

ASN 19 PRO 20 0.0003

PRO 20 GLN 21 -0.0187

GLN 21 ALA 22 -0.0002

ALA 22 GLU 23 -0.0001

GLU 23 GLY 24 0.0553

GLY 24 GLN 25 -0.0002

GLN 25 LEU 26 -0.0001

LEU 26 GLN 27 0.1468

GLN 27 TRP 28 -0.0004

TRP 28 LEU 29 0.0002

LEU 29 ASN 30 0.1182

ASN 30 ARG 31 0.0002

ARG 31 ARG 32 0.0001

ARG 32 ALA 33 -0.0299

ALA 33 ASN 34 0.0002

ASN 34 ALA 35 0.0002

ALA 35 LEU 36 -0.0556

LEU 36 LEU 37 -0.0003

LEU 37 ALA 38 -0.0001

ALA 38 ASN 39 -0.0118

ASN 39 GLY 40 -0.0000

GLY 40 VAL 41 0.0003

VAL 41 GLU 42 0.0537

GLU 42 LEU 43 0.0003

LEU 43 ARG 44 0.0001

ARG 44 ASP 45 0.0302

ASP 45 ASN 46 -0.0000

ASN 46 GLN 47 -0.0001

GLN 47 LEU 48 0.0361

LEU 48 VAL 49 -0.0003

VAL 49 VAL 50 0.0000

VAL 50 PRO 51 0.0177

PRO 51 SER 52 -0.0003

SER 52 GLU 53 0.0004

GLU 53 GLY 54 0.0020

GLY 54 LEU 55 -0.0003

LEU 55 TYR 56 0.0005

TYR 56 LEU 57 0.0124

LEU 57 ILE 58 0.0001

ILE 58 TYR 59 -0.0001

TYR 59 SER 60 0.0124

SER 60 GLN 61 0.0002

GLN 61 VAL 62 0.0000

VAL 62 LEU 63 0.0460

LEU 63 PHE 64 0.0001

PHE 64 LYS 65 0.0003

LYS 65 GLY 66 0.3002

GLY 66 GLN 67 0.0005

GLN 67 GLY 68 -0.0001

GLY 68 CYS 69 -0.1532

CYS 69 PRO 70 0.0003

PRO 70 SER 71 -0.0001

SER 71 THR 72 -0.0611

THR 72 HIS 73 0.0002

HIS 73 VAL 74 0.0001

VAL 74 LEU 75 -0.0775

LEU 75 LEU 76 -0.0001

LEU 76 THR 77 0.0004

THR 77 HIS 78 0.1003

HIS 78 THR 79 0.0001

THR 79 ILE 80 -0.0001

ILE 80 SER 81 -0.0057

SER 81 ARG 82 0.0001

ARG 82 ILE 83 0.0003

ILE 83 ALA 84 -0.0026

ALA 84 VAL 85 -0.0003

VAL 85 SER 86 -0.0000

SER 86 TYR 87 0.0159

TYR 87 GLN 88 -0.0003

GLN 88 THR 89 -0.0002

THR 89 LYS 90 0.0431

LYS 90 VAL 91 -0.0001

VAL 91 ASN 92 0.0000

ASN 92 LEU 93 0.0420

LEU 93 LEU 94 -0.0001

LEU 94 SER 95 -0.0001

SER 95 ALA 96 0.0179

ALA 96 ILE 97 -0.0001

ILE 97 LYS 98 -0.0003

LYS 98 SER 99 -0.0505

SER 99 PRO 100 0.0001

PRO 100 CYS 101 0.0001

CYS 101 GLN 102 0.2022

GLN 102 ARG 103 -0.0003

ARG 103 GLU 104 0.0002

GLU 104 THR 105 -0.0420

THR 105 PRO 106 0.0002

PRO 106 GLU 107 -0.0001

GLU 107 GLY 108 -0.2122

GLY 108 ALA 109 -0.0002

ALA 109 GLU 110 0.0003

GLU 110 ALA 111 0.0884

ALA 111 LYS 112 0.0000

LYS 112 PRO 113 0.0000

PRO 113 TRP 114 0.0631

TRP 114 TYR 115 0.0003

TYR 115 GLU 116 0.0002

GLU 116 PRO 117 0.0884

PRO 117 ILE 118 -0.0002

ILE 118 TYR 119 -0.0002

TYR 119 LEU 120 -0.0185

LEU 120 GLY 121 0.0003

GLY 121 GLY 122 -0.0001

GLY 122 VAL 123 -0.0092

VAL 123 PHE 124 -0.0001

PHE 124 GLN 125 -0.0000

GLN 125 LEU 126 0.0580

LEU 126 GLU 127 -0.0000

GLU 127 LYS 128 -0.0000

LYS 128 GLY 129 0.0152

GLY 129 ASP 130 -0.0002

ASP 130 ARG 131 0.0000

ARG 131 LEU 132 0.0212

LEU 132 SER 133 0.0001

SER 133 ALA 134 0.0001

ALA 134 GLU 135 0.0825

GLU 135 ILE 136 0.0003

ILE 136 ASN 137 -0.0001

ASN 137 ARG 138 -0.0646

ARG 138 PRO 139 -0.0001

PRO 139 ASP 140 -0.0000

ASP 140 TYR 141 0.0191

TYR 141 LEU 142 0.0002

LEU 142 LEU 143 -0.0001

LEU 143 PHE 144 0.1977

PHE 144 ALA 145 0.0002

ALA 145 GLU 146 -0.0003

GLU 146 SER 147 0.1483

SER 147 GLY 148 0.0001

GLY 148 GLN 149 0.0001

GLN 149 VAL 150 -0.0714

VAL 150 TYR 151 0.0004

TYR 151 PHE 152 -0.0001

PHE 152 GLY 153 0.0870

GLY 153 ILE 154 0.0001

ILE 154 ILE 155 -0.0001

ILE 155 ALA 156 -0.0114

ALA 156 LEU 157 -0.0002

LEU 157 ARG 6 -0.0342

ARG 6 THR 7 -0.0000

THR 7 PRO 8 -0.0000

PRO 8 SER 9 0.0093

SER 9 ASP 10 -0.0001

ASP 10 LYS 11 -0.0003

LYS 11 PRO 12 -0.0043

PRO 12 VAL 13 -0.0000

VAL 13 ALA 14 0.0002

ALA 14 HIS 15 -0.0222

HIS 15 VAL 16 0.0001

VAL 16 VAL 17 0.0002

VAL 17 ALA 18 0.0013

ALA 18 ASN 19 -0.0002

ASN 19 PRO 20 -0.0000

PRO 20 GLN 21 -0.0136

GLN 21 ALA 22 -0.0001

ALA 22 GLU 23 -0.0003

GLU 23 GLY 24 0.0118

GLY 24 GLN 25 -0.0000

GLN 25 LEU 26 -0.0002

LEU 26 GLN 27 -0.0363

GLN 27 TRP 28 0.0001

TRP 28 LEU 29 -0.0003

LEU 29 ASN 30 -0.0343

ASN 30 ARG 31 0.0002

ARG 31 ARG 32 0.0000

ARG 32 ALA 33 0.0165

ALA 33 ASN 34 -0.0000

ASN 34 ALA 35 0.0001

ALA 35 LEU 36 0.0051

LEU 36 LEU 37 0.0002

LEU 37 ALA 38 -0.0003

ALA 38 ASN 39 -0.0078

ASN 39 GLY 40 -0.0004

GLY 40 VAL 41 0.0001

VAL 41 GLU 42 -0.0121

GLU 42 LEU 43 -0.0001

LEU 43 ARG 44 -0.0000

ARG 44 ASP 45 -0.0124

ASP 45 ASN 46 -0.0001

ASN 46 GLN 47 -0.0002

GLN 47 LEU 48 -0.0400

LEU 48 VAL 49 0.0003

VAL 49 VAL 50 0.0002

VAL 50 PRO 51 -0.0561

PRO 51 SER 52 -0.0000

SER 52 GLU 53 -0.0000

GLU 53 GLY 54 -0.0045

GLY 54 LEU 55 -0.0000

LEU 55 TYR 56 0.0004

TYR 56 LEU 57 0.0121

LEU 57 ILE 58 -0.0002

ILE 58 TYR 59 -0.0002

TYR 59 SER 60 -0.0985

SER 60 GLN 61 -0.0000

GLN 61 VAL 62 0.0006

VAL 62 LEU 63 -0.1578

LEU 63 PHE 64 -0.0003

PHE 64 LYS 65 0.0002

LYS 65 GLY 66 -0.1281

GLY 66 GLN 67 -0.0001

GLN 67 GLY 68 -0.0001

GLY 68 CYS 69 0.0893

CYS 69 PRO 70 -0.0002

PRO 70 SER 71 0.0001

SER 71 THR 72 -0.0603

THR 72 HIS 73 0.0001

HIS 73 VAL 74 0.0003

VAL 74 LEU 75 -0.1951

LEU 75 LEU 76 -0.0003

LEU 76 THR 77 0.0005

THR 77 HIS 78 -0.2255

HIS 78 THR 79 0.0002

THR 79 ILE 80 -0.0000

ILE 80 SER 81 -0.1648

SER 81 ARG 82 -0.0003

ARG 82 ILE 83 -0.0001

ILE 83 ALA 84 -0.0814

ALA 84 VAL 85 0.0003

VAL 85 SER 86 -0.0002

SER 86 TYR 87 0.0023

TYR 87 GLN 88 0.0001

GLN 88 THR 89 0.0000

THR 89 LYS 90 -0.0683

LYS 90 VAL 91 -0.0001

VAL 91 ASN 92 -0.0001

ASN 92 LEU 93 0.0262

LEU 93 LEU 94 -0.0004

LEU 94 SER 95 0.0005

SER 95 ALA 96 -0.1944

ALA 96 ILE 97 -0.0002

ILE 97 LYS 98 -0.0001

LYS 98 SER 99 -0.1323

SER 99 PRO 100 0.0002

PRO 100 CYS 101 -0.0000

CYS 101 GLN 102 -0.0258

GLN 102 ARG 103 -0.0001

ARG 103 GLU 104 0.0000

GLU 104 THR 105 -0.0114

THR 105 PRO 106 -0.0001

PRO 106 GLU 107 0.0000

GLU 107 GLY 108 0.1153

GLY 108 ALA 109 -0.0002

ALA 109 GLU 110 0.0002

GLU 110 ALA 111 -0.0782

ALA 111 LYS 112 -0.0000

LYS 112 PRO 113 0.0004

PRO 113 TRP 114 0.0742

TRP 114 TYR 115 0.0001

TYR 115 GLU 116 -0.0002

GLU 116 PRO 117 -0.0056

PRO 117 ILE 118 0.0002

ILE 118 TYR 119 0.0003

TYR 119 LEU 120 -0.0373

LEU 120 GLY 121 0.0003

GLY 121 GLY 122 -0.0003

GLY 122 VAL 123 -0.0507

VAL 123 PHE 124 -0.0000

PHE 124 GLN 125 -0.0003

GLN 125 LEU 126 0.0608

LEU 126 GLU 127 -0.0004

GLU 127 LYS 128 0.0002

LYS 128 GLY 129 -0.0450

GLY 129 ASP 130 -0.0001

ASP 130 ARG 131 -0.0001

ARG 131 LEU 132 -0.0887

LEU 132 SER 133 0.0001

SER 133 ALA 134 0.0002

ALA 134 GLU 135 -0.1816

GLU 135 ILE 136 0.0000

ILE 136 ASN 137 0.0001

ASN 137 ARG 138 -0.2012

ARG 138 PRO 139 -0.0002

PRO 139 ASP 140 0.0001

ASP 140 TYR 141 -0.0131

TYR 141 LEU 142 0.0002

LEU 142 LEU 143 -0.0005

LEU 143 PHE 144 0.0207

PHE 144 ALA 145 -0.0001

ALA 145 GLU 146 0.0003

GLU 146 SER 147 0.1263

SER 147 GLY 148 0.0000

GLY 148 GLN 149 -0.0005

GLN 149 VAL 150 -0.0811

VAL 150 TYR 151 -0.0001

TYR 151 PHE 152 -0.0002

PHE 152 GLY 153 -0.0772

GLY 153 ILE 154 -0.0003

ILE 154 ILE 155 0.0002

ILE 155 ALA 156 -0.0189

ALA 156 LEU 157 0.0001

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** LYMPHOKINE 25-AUG-89 1TNF ***

CA strain for 2406080142331607873

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *