Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *

CA strain for 2406080142331607873

--- normal mode 11 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ARG 6 THR 7 0.0001

THR 7 PRO 8 0.0001

PRO 8 SER 9 0.0501

SER 9 ASP 10 0.0002

ASP 10 LYS 11 0.0002

LYS 11 PRO 12 -0.0662

PRO 12 VAL 13 -0.0003

VAL 13 ALA 14 0.0003

ALA 14 HIS 15 0.0084

HIS 15 VAL 16 -0.0000

VAL 16 VAL 17 0.0000

VAL 17 ALA 18 0.0132

ALA 18 ASN 19 0.0000

ASN 19 PRO 20 0.0001

PRO 20 GLN 21 0.1414

GLN 21 ALA 22 0.0000

ALA 22 GLU 23 -0.0000

GLU 23 GLY 24 -0.0373

GLY 24 GLN 25 0.0000

GLN 25 LEU 26 -0.0000

LEU 26 GLN 27 0.0146

GLN 27 TRP 28 -0.0003

TRP 28 LEU 29 0.0002

LEU 29 ASN 30 0.0293

ASN 30 ARG 31 -0.0003

ARG 31 ARG 32 -0.0003

ARG 32 ALA 33 0.2091

ALA 33 ASN 34 0.0000

ASN 34 ALA 35 -0.0001

ALA 35 LEU 36 0.0738

LEU 36 LEU 37 -0.0004

LEU 37 ALA 38 0.0003

ALA 38 ASN 39 -0.0220

ASN 39 GLY 40 -0.0001

GLY 40 VAL 41 0.0004

VAL 41 GLU 42 -0.0398

GLU 42 LEU 43 -0.0003

LEU 43 ARG 44 -0.0001

ARG 44 ASP 45 -0.0109

ASP 45 ASN 46 0.0000

ASN 46 GLN 47 0.0002

GLN 47 LEU 48 -0.0188

LEU 48 VAL 49 -0.0002

VAL 49 VAL 50 0.0000

VAL 50 PRO 51 0.0165

PRO 51 SER 52 0.0002

SER 52 GLU 53 0.0002

GLU 53 GLY 54 -0.0759

GLY 54 LEU 55 0.0002

LEU 55 TYR 56 -0.0001

TYR 56 LEU 57 -0.0547

LEU 57 ILE 58 0.0001

ILE 58 TYR 59 0.0003

TYR 59 SER 60 0.0172

SER 60 GLN 61 -0.0002

GLN 61 VAL 62 0.0003

VAL 62 LEU 63 0.0419

LEU 63 PHE 64 0.0004

PHE 64 LYS 65 -0.0004

LYS 65 GLY 66 0.2034

GLY 66 GLN 67 0.0003

GLN 67 GLY 68 -0.0001

GLY 68 CYS 69 -0.0786

CYS 69 PRO 70 -0.0002

PRO 70 SER 71 -0.0004

SER 71 THR 72 -0.0490

THR 72 HIS 73 0.0002

HIS 73 VAL 74 -0.0003

VAL 74 LEU 75 0.0380

LEU 75 LEU 76 0.0000

LEU 76 THR 77 0.0000

THR 77 HIS 78 0.0482

HIS 78 THR 79 -0.0001

THR 79 ILE 80 -0.0000

ILE 80 SER 81 0.0858

SER 81 ARG 82 0.0001

ARG 82 ILE 83 -0.0001

ILE 83 ALA 84 0.0424

ALA 84 VAL 85 -0.0001

VAL 85 SER 86 0.0002

SER 86 TYR 87 0.0122

TYR 87 GLN 88 -0.0000

GLN 88 THR 89 0.0001

THR 89 LYS 90 0.0588

LYS 90 VAL 91 -0.0001

VAL 91 ASN 92 -0.0003

ASN 92 LEU 93 -0.0272

LEU 93 LEU 94 0.0001

LEU 94 SER 95 -0.0000

SER 95 ALA 96 0.0115

ALA 96 ILE 97 0.0004

ILE 97 LYS 98 0.0000

LYS 98 SER 99 -0.0167

SER 99 PRO 100 0.0007

PRO 100 CYS 101 -0.0002

CYS 101 GLN 102 0.1446

GLN 102 ARG 103 -0.0002

ARG 103 GLU 104 0.0001

GLU 104 THR 105 -0.0125

THR 105 PRO 106 -0.0001

PRO 106 GLU 107 0.0002

GLU 107 GLY 108 -0.0960

GLY 108 ALA 109 -0.0002

ALA 109 GLU 110 0.0002

GLU 110 ALA 111 0.0986

ALA 111 LYS 112 0.0001

LYS 112 PRO 113 0.0000

PRO 113 TRP 114 -0.0267

TRP 114 TYR 115 -0.0001

TYR 115 GLU 116 0.0000

GLU 116 PRO 117 0.0257

PRO 117 ILE 118 -0.0003

ILE 118 TYR 119 0.0001

TYR 119 LEU 120 0.0381

LEU 120 GLY 121 0.0004

GLY 121 GLY 122 -0.0003

GLY 122 VAL 123 -0.0574

VAL 123 PHE 124 0.0002

PHE 124 GLN 125 -0.0004

GLN 125 LEU 126 -0.0198

LEU 126 GLU 127 -0.0001

GLU 127 LYS 128 -0.0002

LYS 128 GLY 129 -0.0223

GLY 129 ASP 130 0.0001

ASP 130 ARG 131 0.0002

ARG 131 LEU 132 0.0204

LEU 132 SER 133 -0.0000

SER 133 ALA 134 -0.0003

ALA 134 GLU 135 0.0771

GLU 135 ILE 136 -0.0001

ILE 136 ASN 137 0.0001

ASN 137 ARG 138 0.0446

ARG 138 PRO 139 0.0002

PRO 139 ASP 140 0.0006

ASP 140 TYR 141 0.0383

TYR 141 LEU 142 -0.0001

LEU 142 LEU 143 0.0001

LEU 143 PHE 144 0.0176

PHE 144 ALA 145 -0.0005

ALA 145 GLU 146 -0.0001

GLU 146 SER 147 -0.0582

SER 147 GLY 148 -0.0002

GLY 148 GLN 149 -0.0002

GLN 149 VAL 150 0.1559

VAL 150 TYR 151 0.0003

TYR 151 PHE 152 -0.0004

PHE 152 GLY 153 0.0078

GLY 153 ILE 154 -0.0001

ILE 154 ILE 155 0.0002

ILE 155 ALA 156 0.0794

ALA 156 LEU 157 0.0001

LEU 157 ARG 6 -0.1279

ARG 6 THR 7 0.0001

THR 7 PRO 8 -0.0000

PRO 8 SER 9 -0.3296

SER 9 ASP 10 0.0001

ASP 10 LYS 11 0.0001

LYS 11 PRO 12 -0.0266

PRO 12 VAL 13 0.0003

VAL 13 ALA 14 -0.0002

ALA 14 HIS 15 -0.1021

HIS 15 VAL 16 0.0000

VAL 16 VAL 17 0.0002

VAL 17 ALA 18 0.0009

ALA 18 ASN 19 -0.0000

ASN 19 PRO 20 0.0004

PRO 20 GLN 21 0.0161

GLN 21 ALA 22 0.0002

ALA 22 GLU 23 0.0002

GLU 23 GLY 24 -0.0604

GLY 24 GLN 25 0.0001

GLN 25 LEU 26 0.0001

LEU 26 GLN 27 -0.1637

GLN 27 TRP 28 -0.0001

TRP 28 LEU 29 -0.0001

LEU 29 ASN 30 -0.0801

ASN 30 ARG 31 -0.0004

ARG 31 ARG 32 -0.0004

ARG 32 ALA 33 0.1406

ALA 33 ASN 34 -0.0001

ASN 34 ALA 35 -0.0003

ALA 35 LEU 36 -0.1092

LEU 36 LEU 37 0.0002

LEU 37 ALA 38 0.0001

ALA 38 ASN 39 -0.1483

ASN 39 GLY 40 0.0003

GLY 40 VAL 41 -0.0003

VAL 41 GLU 42 0.0671

GLU 42 LEU 43 -0.0000

LEU 43 ARG 44 0.0004

ARG 44 ASP 45 0.0041

ASP 45 ASN 46 -0.0000

ASN 46 GLN 47 0.0002

GLN 47 LEU 48 -0.0057

LEU 48 VAL 49 0.0003

VAL 49 VAL 50 0.0002

VAL 50 PRO 51 -0.0794

PRO 51 SER 52 0.0004

SER 52 GLU 53 -0.0004

GLU 53 GLY 54 0.1059

GLY 54 LEU 55 -0.0003

LEU 55 TYR 56 0.0000

TYR 56 LEU 57 0.0487

LEU 57 ILE 58 0.0002

ILE 58 TYR 59 -0.0003

TYR 59 SER 60 -0.0342

SER 60 GLN 61 0.0000

GLN 61 VAL 62 -0.0002

VAL 62 LEU 63 -0.0864

LEU 63 PHE 64 0.0003

PHE 64 LYS 65 0.0000

LYS 65 GLY 66 -0.1876

GLY 66 GLN 67 -0.0004

GLN 67 GLY 68 0.0002

GLY 68 CYS 69 0.1529

CYS 69 PRO 70 -0.0001

PRO 70 SER 71 -0.0004

SER 71 THR 72 0.0380

THR 72 HIS 73 0.0000

HIS 73 VAL 74 -0.0004

VAL 74 LEU 75 -0.0732

LEU 75 LEU 76 0.0000

LEU 76 THR 77 0.0002

THR 77 HIS 78 -0.1595

HIS 78 THR 79 -0.0001

THR 79 ILE 80 0.0001

ILE 80 SER 81 -0.0025

SER 81 ARG 82 0.0005

ARG 82 ILE 83 0.0001

ILE 83 ALA 84 -0.0257

ALA 84 VAL 85 0.0003

VAL 85 SER 86 -0.0001

SER 86 TYR 87 -0.0755

TYR 87 GLN 88 0.0001

GLN 88 THR 89 0.0001

THR 89 LYS 90 -0.1279

LYS 90 VAL 91 -0.0002

VAL 91 ASN 92 0.0003

ASN 92 LEU 93 -0.0502

LEU 93 LEU 94 -0.0000

LEU 94 SER 95 -0.0002

SER 95 ALA 96 -0.1541

ALA 96 ILE 97 -0.0001

ILE 97 LYS 98 -0.0001

LYS 98 SER 99 -0.0508

SER 99 PRO 100 0.0000

PRO 100 CYS 101 -0.0002

CYS 101 GLN 102 -0.0760

GLN 102 ARG 103 0.0004

ARG 103 GLU 104 -0.0002

GLU 104 THR 105 -0.0586

THR 105 PRO 106 -0.0003

PRO 106 GLU 107 -0.0001

GLU 107 GLY 108 0.0930

GLY 108 ALA 109 0.0001

ALA 109 GLU 110 0.0001

GLU 110 ALA 111 0.0166

ALA 111 LYS 112 0.0001

LYS 112 PRO 113 -0.0001

PRO 113 TRP 114 0.0114

TRP 114 TYR 115 -0.0001

TYR 115 GLU 116 0.0000

GLU 116 PRO 117 -0.0280

PRO 117 ILE 118 0.0004

ILE 118 TYR 119 0.0001

TYR 119 LEU 120 -0.0464

LEU 120 GLY 121 -0.0003

GLY 121 GLY 122 0.0004

GLY 122 VAL 123 0.0385

VAL 123 PHE 124 -0.0000

PHE 124 GLN 125 -0.0000

GLN 125 LEU 126 -0.0831

LEU 126 GLU 127 0.0002

GLU 127 LYS 128 0.0001

LYS 128 GLY 129 0.0068

GLY 129 ASP 130 0.0001

ASP 130 ARG 131 -0.0004

ARG 131 LEU 132 -0.0562

LEU 132 SER 133 -0.0001

SER 133 ALA 134 -0.0001

ALA 134 GLU 135 -0.1017

GLU 135 ILE 136 -0.0003

ILE 136 ASN 137 0.0002

ASN 137 ARG 138 -0.0111

ARG 138 PRO 139 -0.0000

PRO 139 ASP 140 -0.0002

ASP 140 TYR 141 -0.0718

TYR 141 LEU 142 0.0001

LEU 142 LEU 143 0.0003

LEU 143 PHE 144 -0.0665

PHE 144 ALA 145 -0.0001

ALA 145 GLU 146 -0.0003

GLU 146 SER 147 0.0231

SER 147 GLY 148 -0.0001

GLY 148 GLN 149 0.0001

GLN 149 VAL 150 -0.0178

VAL 150 TYR 151 0.0002

TYR 151 PHE 152 -0.0002

PHE 152 GLY 153 -0.0690

GLY 153 ILE 154 -0.0003

ILE 154 ILE 155 -0.0004

ILE 155 ALA 156 -0.1148

ALA 156 LEU 157 0.0001

LEU 157 ARG 6 -0.1019

ARG 6 THR 7 0.0002

THR 7 PRO 8 -0.0000

PRO 8 SER 9 0.0505

SER 9 ASP 10 0.0000

ASP 10 LYS 11 0.0001

LYS 11 PRO 12 0.0926

PRO 12 VAL 13 -0.0002

VAL 13 ALA 14 0.0005

ALA 14 HIS 15 0.0220

HIS 15 VAL 16 0.0005

VAL 16 VAL 17 -0.0000

VAL 17 ALA 18 0.0116

ALA 18 ASN 19 0.0003

ASN 19 PRO 20 -0.0001

PRO 20 GLN 21 -0.0553

GLN 21 ALA 22 -0.0001

ALA 22 GLU 23 0.0002

GLU 23 GLY 24 0.1021

GLY 24 GLN 25 0.0002

GLN 25 LEU 26 0.0001

LEU 26 GLN 27 0.1266

GLN 27 TRP 28 -0.0003

TRP 28 LEU 29 0.0001

LEU 29 ASN 30 0.0858

ASN 30 ARG 31 0.0002

ARG 31 ARG 32 -0.0002

ARG 32 ALA 33 -0.3293

ALA 33 ASN 34 0.0004

ASN 34 ALA 35 0.0001

ALA 35 LEU 36 0.0475

LEU 36 LEU 37 0.0000

LEU 37 ALA 38 0.0003

ALA 38 ASN 39 0.0920

ASN 39 GLY 40 -0.0002

GLY 40 VAL 41 0.0003

VAL 41 GLU 42 -0.0055

GLU 42 LEU 43 0.0002

LEU 43 ARG 44 0.0002

ARG 44 ASP 45 0.0066

ASP 45 ASN 46 -0.0001

ASN 46 GLN 47 -0.0004

GLN 47 LEU 48 0.0385

LEU 48 VAL 49 0.0001

VAL 49 VAL 50 0.0003

VAL 50 PRO 51 0.0503

PRO 51 SER 52 0.0000

SER 52 GLU 53 -0.0002

GLU 53 GLY 54 -0.0013

GLY 54 LEU 55 0.0002

LEU 55 TYR 56 -0.0002

TYR 56 LEU 57 -0.0024

LEU 57 ILE 58 0.0001

ILE 58 TYR 59 0.0001

TYR 59 SER 60 -0.0287

SER 60 GLN 61 0.0002

GLN 61 VAL 62 -0.0002

VAL 62 LEU 63 0.0224

LEU 63 PHE 64 0.0002

PHE 64 LYS 65 -0.0002

LYS 65 GLY 66 -0.0390

GLY 66 GLN 67 -0.0001

GLN 67 GLY 68 0.0001

GLY 68 CYS 69 -0.0353

CYS 69 PRO 70 0.0000

PRO 70 SER 71 -0.0001

SER 71 THR 72 0.0267

THR 72 HIS 73 -0.0002

HIS 73 VAL 74 -0.0001

VAL 74 LEU 75 0.0564

LEU 75 LEU 76 -0.0002

LEU 76 THR 77 0.0003

THR 77 HIS 78 0.0725

HIS 78 THR 79 -0.0003

THR 79 ILE 80 0.0005

ILE 80 SER 81 -0.1355

SER 81 ARG 82 0.0002

ARG 82 ILE 83 -0.0001

ILE 83 ALA 84 -0.0873

ALA 84 VAL 85 -0.0002

VAL 85 SER 86 -0.0000

SER 86 TYR 87 -0.0812

TYR 87 GLN 88 0.0001

GLN 88 THR 89 -0.0001

THR 89 LYS 90 -0.0079

LYS 90 VAL 91 -0.0000

VAL 91 ASN 92 0.0001

ASN 92 LEU 93 0.2050

LEU 93 LEU 94 -0.0000

LEU 94 SER 95 -0.0002

SER 95 ALA 96 0.1573

ALA 96 ILE 97 0.0002

ILE 97 LYS 98 0.0002

LYS 98 SER 99 0.0714

SER 99 PRO 100 0.0002

PRO 100 CYS 101 -0.0003

CYS 101 GLN 102 -0.0298

GLN 102 ARG 103 -0.0002

ARG 103 GLU 104 0.0002

GLU 104 THR 105 0.0380

THR 105 PRO 106 -0.0003

PRO 106 GLU 107 -0.0001

GLU 107 GLY 108 -0.0282

GLY 108 ALA 109 -0.0002

ALA 109 GLU 110 -0.0004

GLU 110 ALA 111 -0.0574

ALA 111 LYS 112 0.0001

LYS 112 PRO 113 0.0000

PRO 113 TRP 114 -0.0269

TRP 114 TYR 115 0.0002

TYR 115 GLU 116 -0.0001

GLU 116 PRO 117 -0.0256

PRO 117 ILE 118 -0.0003

ILE 118 TYR 119 0.0003

TYR 119 LEU 120 0.0295

LEU 120 GLY 121 0.0000

GLY 121 GLY 122 -0.0001

GLY 122 VAL 123 -0.0051

VAL 123 PHE 124 0.0002

PHE 124 GLN 125 -0.0001

GLN 125 LEU 126 0.1763

LEU 126 GLU 127 0.0002

GLU 127 LYS 128 -0.0001

LYS 128 GLY 129 0.0185

GLY 129 ASP 130 0.0000

ASP 130 ARG 131 -0.0001

ARG 131 LEU 132 0.0373

LEU 132 SER 133 0.0002

SER 133 ALA 134 0.0000

ALA 134 GLU 135 0.0425

GLU 135 ILE 136 0.0001

ILE 136 ASN 137 0.0002

ASN 137 ARG 138 -0.0424

ARG 138 PRO 139 0.0001

PRO 139 ASP 140 -0.0001

ASP 140 TYR 141 0.0171

TYR 141 LEU 142 0.0001

LEU 142 LEU 143 0.0000

LEU 143 PHE 144 0.0152

PHE 144 ALA 145 0.0000

ALA 145 GLU 146 -0.0004

GLU 146 SER 147 -0.1602

SER 147 GLY 148 0.0002

GLY 148 GLN 149 -0.0001

GLN 149 VAL 150 -0.1127

VAL 150 TYR 151 -0.0001

TYR 151 PHE 152 -0.0002

PHE 152 GLY 153 0.0034

GLY 153 ILE 154 0.0001

ILE 154 ILE 155 -0.0001

ILE 155 ALA 156 -0.0628

ALA 156 LEU 157 -0.0003

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** LYMPHOKINE 25-AUG-89 1TNF ***

CA strain for 2406080142331607873

--- normal mode 11 ---

Should you encounter any unexpected behaviour,
please let us know.

* LYMPHOKINE 25-AUG-89 1TNF *