CNRS Nantes University US2B US2B
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***  opt_a_lac  ***

CA strain for 2406061849031399629

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1001SER 1002 0.0891
SER 1002GLY 1003 -0.3464
GLY 1003LEU 1004 -0.1103
LEU 1004VAL 1005 0.2628
VAL 1005ALA 1006 0.0907
ALA 1006SER 1007 0.2946
SER 1007ASN 1008 0.1181
ASN 1008LEU 1009 0.1828
LEU 1009ASN 1010 0.2961
ASN 1010LEU 1011 0.0269
LEU 1011LYS 1012 0.1729
LYS 1012PRO 1013 -0.0497
PRO 1013GLY 1014 0.0131
GLY 1014GLU 1015 0.0899
GLU 1015LEU 1017 0.1518
LEU 1017ARG 1018 0.2301
ARG 1018VAL 1019 0.0295
VAL 1019ARG 1020 0.1738
ARG 1020GLY 1021 0.1149
GLY 1021GLU 1022 0.2315
GLU 1022VAL 1023 0.0555
VAL 1023ALA 1024 0.0091
ALA 1024PRO 1025 0.3031
PRO 1025ASP 1026 -0.0284
ASP 1026ALA 1027 -0.0320
ALA 1027LYS 1028 0.0157
LYS 1028SER 1029 -0.0025
SER 1029PHE 1030 0.0123
PHE 1030VAL 1031 0.0793
VAL 1031LEU 1032 0.0200
LEU 1032ASN 1033 0.0608
ASN 1033LEU 1034 0.0874
LEU 1034GLY 1035 0.0624
GLY 1035LYS 1036 0.0187
LYS 1036ASP 1037 0.0119
ASP 1037SER 1038 -0.0304
SER 1038ASN 1039 0.0698
ASN 1039ASN 1040 0.0100
ASN 1040LEU 1041 -0.0036
LEU 1041CYS 1042 0.0833
CYS 1042LEU 1043 -0.0756
LEU 1043HIS 1044 -0.0447
HIS 1044PHE 1045 -0.0786
PHE 1045ASN 1046 -0.0801
ASN 1046PRO 1047 -0.1179
PRO 1047ARG 1048 0.0382
ARG 1048PHE 1049 -0.2316
PHE 1049ASN 1050 0.2046
ASN 1050ALA 1051 -0.0096
ALA 1051HIS 1052 0.0840
HIS 1052GLY 1053 -0.0237
GLY 1053ASP 1054 0.1187
ASP 1054ALA 1055 -0.1426
ALA 1055ASN 1056 0.2221
ASN 1056THR 1057 -0.3717
THR 1057ILE 1058 -0.0010
ILE 1058VAL 1059 -0.0564
VAL 1059CYS 1060 -0.2741
CYS 1060ASN 1061 -0.0684
ASN 1061SER 1062 -0.2707
SER 1062LYS 1063 0.0620
LYS 1063ASP 1064 -0.0144
ASP 1064ASP 1065 -0.0230
ASP 1065GLY 1066 -0.0130
GLY 1066ALA 1067 -0.0372
ALA 1067TRP 1068 -0.0605
TRP 1068GLY 1069 0.1071
GLY 1069THR 1070 -0.0764
THR 1070GLU 1071 -0.2312
GLU 1071GLN 1072 0.1357
GLN 1072ARG 1073 -0.3167
ARG 1073GLU 1074 0.1287
GLU 1074ALA 1075 -0.1286
ALA 1075VAL 1076 -0.0376
VAL 1076PHE 1077 -0.1629
PHE 1077PRO 1078 0.1735
PRO 1078PHE 1079 -0.1878
PHE 1079GLN 1080 -0.1800
GLN 1080PRO 1081 -0.2969
PRO 1081GLY 1082 0.0979
GLY 1082SER 1083 -0.0898
SER 1083VAL 1084 0.2143
VAL 1084ALA 1085 -0.1935
ALA 1085GLU 1086 0.2022
GLU 1086VAL 1087 -0.0706
VAL 1087CYS 1088 0.0667
CYS 1088ILE 1089 0.0396
ILE 1089THR 1090 0.0456
THR 1090PHE 1091 0.0173
PHE 1091ASP 1092 0.0801
ASP 1092GLN 1093 -0.0381
GLN 1093ALA 1094 -0.1148
ALA 1094ASN 1095 -0.0440
ASN 1095LEU 1096 0.0550
LEU 1096THR 1097 0.0130
THR 1097VAL 1098 -0.0720
VAL 1098LYS 1099 0.0368
LYS 1099LEU 1100 0.0165
LEU 1100PRO 1101 -0.1162
PRO 1101ASP 1102 -0.1061
ASP 1102GLY 1103 0.0057
GLY 1103TYR 1104 0.1362
TYR 1104GLU 1105 -0.1848
GLU 1105PHE 1106 0.1705
PHE 1106LYS 1107 -0.2865
LYS 1107PHE 1108 0.1858
PHE 1108PRO 1109 -0.1138
PRO 1109ASN 1110 -0.2895
ASN 1110ARG 1111 0.0282
ARG 1111LEU 1112 -0.2116
LEU 1112ASN 1113 0.0475
ASN 1113LEU 1114 0.1288
LEU 1114GLU 1115 -0.1472
GLU 1115ALA 1116 0.1438
ALA 1116ILE 1117 0.1573
ILE 1117ASN 1118 -0.1362
ASN 1118TYR 1119 0.1078
TYR 1119MET 1120 0.1966
MET 1120ALA 1121 0.1256
ALA 1121ALA 1122 0.2622
ALA 1122ASP 1123 0.0215
ASP 1123GLY 1124 0.1879
GLY 1124ASP 1125 0.2285
ASP 1125PHE 1126 0.1689
PHE 1126LYS 1127 -0.1221
LYS 1127ILE 1128 0.2904
ILE 1128LYS 1129 -0.0441
LYS 1129CYS 1130 0.3312
CYS 1130VAL 1131 0.4296
VAL 1131ALA 1132 -0.0515
ALA 1132PHE 1133 0.4793
PHE 1133ASP 1134 -0.2503

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.