CNRS Nantes University US2B US2B
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***  opt_a_lac  ***

CA strain for 2406061849031399629

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1001SER 1002 0.2578
SER 1002GLY 1003 0.0446
GLY 1003LEU 1004 -0.0651
LEU 1004VAL 1005 0.1764
VAL 1005ALA 1006 0.1265
ALA 1006SER 1007 0.0618
SER 1007ASN 1008 0.1054
ASN 1008LEU 1009 -0.0502
LEU 1009ASN 1010 0.0537
ASN 1010LEU 1011 -0.0427
LEU 1011LYS 1012 -0.0078
LYS 1012PRO 1013 0.0733
PRO 1013GLY 1014 -0.0653
GLY 1014GLU 1015 -0.0037
GLU 1015LEU 1017 -0.1255
LEU 1017ARG 1018 -0.2794
ARG 1018VAL 1019 -0.0463
VAL 1019ARG 1020 -0.1130
ARG 1020GLY 1021 -0.0910
GLY 1021GLU 1022 -0.0907
GLU 1022VAL 1023 -0.1145
VAL 1023ALA 1024 -0.1148
ALA 1024PRO 1025 0.2124
PRO 1025ASP 1026 -0.0362
ASP 1026ALA 1027 0.0934
ALA 1027LYS 1028 -0.0246
LYS 1028SER 1029 0.2448
SER 1029PHE 1030 -0.0613
PHE 1030VAL 1031 0.4360
VAL 1031LEU 1032 0.0470
LEU 1032ASN 1033 0.2708
ASN 1033LEU 1034 0.1595
LEU 1034GLY 1035 0.0663
GLY 1035LYS 1036 0.0207
LYS 1036ASP 1037 -0.0254
ASP 1037SER 1038 -0.0382
SER 1038ASN 1039 0.0990
ASN 1039ASN 1040 -0.0392
ASN 1040LEU 1041 0.0885
LEU 1041CYS 1042 -0.0165
CYS 1042LEU 1043 0.0827
LEU 1043HIS 1044 0.1725
HIS 1044PHE 1045 0.2093
PHE 1045ASN 1046 0.0904
ASN 1046PRO 1047 0.1990
PRO 1047ARG 1048 -0.0596
ARG 1048PHE 1049 0.2089
PHE 1049ASN 1050 0.0043
ASN 1050ALA 1051 0.0578
ALA 1051HIS 1052 -0.0740
HIS 1052GLY 1053 -0.0441
GLY 1053ASP 1054 0.0244
ASP 1054ALA 1055 0.0742
ALA 1055ASN 1056 0.0055
ASN 1056THR 1057 0.0091
THR 1057ILE 1058 -0.0418
ILE 1058VAL 1059 0.0997
VAL 1059CYS 1060 0.1189
CYS 1060ASN 1061 0.0036
ASN 1061SER 1062 0.1351
SER 1062LYS 1063 -0.0985
LYS 1063ASP 1064 0.1108
ASP 1064ASP 1065 -0.0932
ASP 1065GLY 1066 0.0911
GLY 1066ALA 1067 -0.0606
ALA 1067TRP 1068 0.0517
TRP 1068GLY 1069 -0.0391
GLY 1069THR 1070 -0.1558
THR 1070GLU 1071 0.1234
GLU 1071GLN 1072 0.0992
GLN 1072ARG 1073 -0.0883
ARG 1073GLU 1074 0.1282
GLU 1074ALA 1075 -0.0922
ALA 1075VAL 1076 0.0147
VAL 1076PHE 1077 -0.1621
PHE 1077PRO 1078 0.0674
PRO 1078PHE 1079 -0.2037
PHE 1079GLN 1080 -0.1309
GLN 1080PRO 1081 -0.2934
PRO 1081GLY 1082 0.0631
GLY 1082SER 1083 -0.2131
SER 1083VAL 1084 -0.1854
VAL 1084ALA 1085 0.0358
ALA 1085GLU 1086 -0.3310
GLU 1086VAL 1087 -0.0691
VAL 1087CYS 1088 -0.1530
CYS 1088ILE 1089 -0.1323
ILE 1089THR 1090 -0.0680
THR 1090PHE 1091 -0.2514
PHE 1091ASP 1092 0.0550
ASP 1092GLN 1093 -0.2138
GLN 1093ALA 1094 0.0774
ALA 1094ASN 1095 -0.0357
ASN 1095LEU 1096 0.0030
LEU 1096THR 1097 -0.1668
THR 1097VAL 1098 -0.1418
VAL 1098LYS 1099 -0.0607
LYS 1099LEU 1100 -0.1802
LEU 1100PRO 1101 -0.1436
PRO 1101ASP 1102 0.2007
ASP 1102GLY 1103 -0.1818
GLY 1103TYR 1104 0.1099
TYR 1104GLU 1105 -0.2793
GLU 1105PHE 1106 0.0348
PHE 1106LYS 1107 -0.2857
LYS 1107PHE 1108 -0.0544
PHE 1108PRO 1109 -0.0918
PRO 1109ASN 1110 0.0264
ASN 1110ARG 1111 0.0638
ARG 1111LEU 1112 0.0242
LEU 1112ASN 1113 0.0380
ASN 1113LEU 1114 0.0561
LEU 1114GLU 1115 0.0615
GLU 1115ALA 1116 0.0350
ALA 1116ILE 1117 0.0703
ILE 1117ASN 1118 -0.0040
ASN 1118TYR 1119 0.1238
TYR 1119MET 1120 0.0821
MET 1120ALA 1121 0.1386
ALA 1121ALA 1122 0.3215
ALA 1122ASP 1123 0.0389
ASP 1123GLY 1124 0.2580
GLY 1124ASP 1125 0.4186
ASP 1125PHE 1126 -0.1982
PHE 1126LYS 1127 -0.2034
LYS 1127ILE 1128 -0.0421
ILE 1128LYS 1129 0.0384
LYS 1129CYS 1130 -0.1138
CYS 1130VAL 1131 -0.1198
VAL 1131ALA 1132 -0.0611
ALA 1132PHE 1133 -0.2026
PHE 1133ASP 1134 0.0124

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.