CNRS Nantes University US2B US2B
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***  opt_a_lac  ***

CA strain for 2406061849031399629

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1001SER 1002 -0.0587
SER 1002GLY 1003 -0.0724
GLY 1003LEU 1004 -0.3313
LEU 1004VAL 1005 0.1910
VAL 1005ALA 1006 -0.2497
ALA 1006SER 1007 0.0170
SER 1007ASN 1008 -0.1597
ASN 1008LEU 1009 0.2642
LEU 1009ASN 1010 -0.1664
ASN 1010LEU 1011 0.1292
LEU 1011LYS 1012 -0.0861
LYS 1012PRO 1013 0.0561
PRO 1013GLY 1014 -0.0408
GLY 1014GLU 1015 -0.1896
GLU 1015LEU 1017 -0.1185
LEU 1017ARG 1018 -0.1216
ARG 1018VAL 1019 -0.0607
VAL 1019ARG 1020 -0.0045
ARG 1020GLY 1021 -0.0528
GLY 1021GLU 1022 -0.0594
GLU 1022VAL 1023 0.0141
VAL 1023ALA 1024 -0.0341
ALA 1024PRO 1025 -0.0746
PRO 1025ASP 1026 0.0526
ASP 1026ALA 1027 -0.0327
ALA 1027LYS 1028 0.0958
LYS 1028SER 1029 -0.0784
SER 1029PHE 1030 -0.1938
PHE 1030VAL 1031 -0.0724
VAL 1031LEU 1032 -0.1514
LEU 1032ASN 1033 0.0755
ASN 1033LEU 1034 -0.0315
LEU 1034GLY 1035 -0.0117
GLY 1035LYS 1036 -0.0081
LYS 1036ASP 1037 0.0171
ASP 1037SER 1038 -0.0721
SER 1038ASN 1039 0.2274
ASN 1039ASN 1040 -0.0272
ASN 1040LEU 1041 -0.0241
LEU 1041CYS 1042 0.0218
CYS 1042LEU 1043 -0.0313
LEU 1043HIS 1044 -0.0684
HIS 1044PHE 1045 -0.0493
PHE 1045ASN 1046 -0.1303
ASN 1046PRO 1047 -0.0596
PRO 1047ARG 1048 -0.0083
ARG 1048PHE 1049 0.0787
PHE 1049ASN 1050 0.1233
ASN 1050ALA 1051 0.0013
ALA 1051HIS 1052 0.1309
HIS 1052GLY 1053 -0.1300
GLY 1053ASP 1054 0.1421
ASP 1054ALA 1055 -0.0529
ALA 1055ASN 1056 0.1475
ASN 1056THR 1057 -0.1320
THR 1057ILE 1058 0.1396
ILE 1058VAL 1059 -0.1312
VAL 1059CYS 1060 0.0685
CYS 1060ASN 1061 -0.1753
ASN 1061SER 1062 -0.0932
SER 1062LYS 1063 -0.0733
LYS 1063ASP 1064 0.0223
ASP 1064ASP 1065 -0.0630
ASP 1065GLY 1066 -0.0774
GLY 1066ALA 1067 0.0562
ALA 1067TRP 1068 -0.1424
TRP 1068GLY 1069 0.1098
GLY 1069THR 1070 -0.0458
THR 1070GLU 1071 0.0476
GLU 1071GLN 1072 -0.1327
GLN 1072ARG 1073 -0.0345
ARG 1073GLU 1074 -0.1106
GLU 1074ALA 1075 -0.0368
ALA 1075VAL 1076 -0.1013
VAL 1076PHE 1077 0.0604
PHE 1077PRO 1078 0.0580
PRO 1078PHE 1079 -0.0151
PHE 1079GLN 1080 -0.0133
GLN 1080PRO 1081 0.0208
PRO 1081GLY 1082 0.0133
GLY 1082SER 1083 0.0174
SER 1083VAL 1084 0.1351
VAL 1084ALA 1085 -0.1408
ALA 1085GLU 1086 0.1144
GLU 1086VAL 1087 -0.1284
VAL 1087CYS 1088 -0.0231
CYS 1088ILE 1089 -0.0526
ILE 1089THR 1090 -0.1042
THR 1090PHE 1091 0.0701
PHE 1091ASP 1092 -0.0919
ASP 1092GLN 1093 0.0473
GLN 1093ALA 1094 0.0342
ALA 1094ASN 1095 -0.0004
ASN 1095LEU 1096 -0.0578
LEU 1096THR 1097 0.0145
THR 1097VAL 1098 0.0228
VAL 1098LYS 1099 -0.0847
LYS 1099LEU 1100 0.0563
LEU 1100PRO 1101 -0.1080
PRO 1101ASP 1102 -0.0128
ASP 1102GLY 1103 0.0373
GLY 1103TYR 1104 -0.0505
TYR 1104GLU 1105 0.0219
GLU 1105PHE 1106 -0.1774
PHE 1106LYS 1107 0.0200
LYS 1107PHE 1108 -0.1353
PHE 1108PRO 1109 -0.0268
PRO 1109ASN 1110 0.0904
ASN 1110ARG 1111 -0.0522
ARG 1111LEU 1112 0.0765
LEU 1112ASN 1113 -0.0246
ASN 1113LEU 1114 0.0140
LEU 1114GLU 1115 -0.0493
GLU 1115ALA 1116 0.0014
ALA 1116ILE 1117 -0.0232
ILE 1117ASN 1118 0.0373
ASN 1118TYR 1119 -0.0896
TYR 1119MET 1120 0.0576
MET 1120ALA 1121 -0.1432
ALA 1121ALA 1122 0.0106
ALA 1122ASP 1123 -0.1409
ASP 1123GLY 1124 -0.3550
GLY 1124ASP 1125 -0.1834
ASP 1125PHE 1126 -0.2549
PHE 1126LYS 1127 0.1748
LYS 1127ILE 1128 -0.2134
ILE 1128LYS 1129 0.1951
LYS 1129CYS 1130 -0.2241
CYS 1130VAL 1131 -0.0342
VAL 1131ALA 1132 -0.1836
ALA 1132PHE 1133 -0.1277
PHE 1133ASP 1134 0.0598

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.