CNRS Nantes University US2B US2B
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***  opt_a_lac  ***

CA strain for 2406061849031399629

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1001SER 1002 -0.1127
SER 1002GLY 1003 0.3344
GLY 1003LEU 1004 0.1131
LEU 1004VAL 1005 0.0941
VAL 1005ALA 1006 0.0429
ALA 1006SER 1007 0.3619
SER 1007ASN 1008 -0.0307
ASN 1008LEU 1009 0.3767
LEU 1009ASN 1010 0.0380
ASN 1010LEU 1011 0.2437
LEU 1011LYS 1012 0.0065
LYS 1012PRO 1013 0.0795
PRO 1013GLY 1014 -0.0387
GLY 1014GLU 1015 -0.1637
GLU 1015LEU 1017 -0.2254
LEU 1017ARG 1018 -0.1924
ARG 1018VAL 1019 -0.0769
VAL 1019ARG 1020 -0.0860
ARG 1020GLY 1021 -0.0489
GLY 1021GLU 1022 -0.1280
GLU 1022VAL 1023 -0.0688
VAL 1023ALA 1024 -0.0075
ALA 1024PRO 1025 -0.3428
PRO 1025ASP 1026 0.0017
ASP 1026ALA 1027 -0.0237
ALA 1027LYS 1028 -0.0797
LYS 1028SER 1029 -0.1080
SER 1029PHE 1030 0.2051
PHE 1030VAL 1031 -0.1355
VAL 1031LEU 1032 0.0537
LEU 1032ASN 1033 -0.0380
ASN 1033LEU 1034 -0.0856
LEU 1034GLY 1035 0.0249
GLY 1035LYS 1036 0.0907
LYS 1036ASP 1037 -0.0312
ASP 1037SER 1038 -0.0370
SER 1038ASN 1039 -0.1760
ASN 1039ASN 1040 0.1111
ASN 1040LEU 1041 0.0336
LEU 1041CYS 1042 0.0577
CYS 1042LEU 1043 -0.0537
LEU 1043HIS 1044 0.0669
HIS 1044PHE 1045 -0.0677
PHE 1045ASN 1046 0.2312
ASN 1046PRO 1047 -0.0314
PRO 1047ARG 1048 0.1383
ARG 1048PHE 1049 -0.1129
PHE 1049ASN 1050 -0.2929
ASN 1050ALA 1051 -0.0243
ALA 1051HIS 1052 -0.1645
HIS 1052GLY 1053 0.1211
GLY 1053ASP 1054 -0.1774
ASP 1054ALA 1055 0.0531
ALA 1055ASN 1056 -0.2787
ASN 1056THR 1057 0.2254
THR 1057ILE 1058 0.0472
ILE 1058VAL 1059 -0.0525
VAL 1059CYS 1060 0.0737
CYS 1060ASN 1061 -0.0312
ASN 1061SER 1062 -0.0636
SER 1062LYS 1063 0.0886
LYS 1063ASP 1064 -0.0418
ASP 1064ASP 1065 0.0292
ASP 1065GLY 1066 0.0504
GLY 1066ALA 1067 -0.2115
ALA 1067TRP 1068 -0.0500
TRP 1068GLY 1069 0.0707
GLY 1069THR 1070 -0.3467
THR 1070GLU 1071 -0.0921
GLU 1071GLN 1072 0.1644
GLN 1072ARG 1073 -0.0872
ARG 1073GLU 1074 -0.0017
GLU 1074ALA 1075 -0.0650
ALA 1075VAL 1076 0.1067
VAL 1076PHE 1077 0.1618
PHE 1077PRO 1078 -0.1676
PRO 1078PHE 1079 0.1148
PHE 1079GLN 1080 0.1424
GLN 1080PRO 1081 0.3149
PRO 1081GLY 1082 -0.1702
GLY 1082SER 1083 0.1661
SER 1083VAL 1084 0.0860
VAL 1084ALA 1085 -0.1399
ALA 1085GLU 1086 0.1211
GLU 1086VAL 1087 -0.2442
VAL 1087CYS 1088 -0.0571
CYS 1088ILE 1089 -0.0771
ILE 1089THR 1090 -0.2525
THR 1090PHE 1091 -0.0613
PHE 1091ASP 1092 -0.0557
ASP 1092GLN 1093 -0.1872
GLN 1093ALA 1094 -0.0559
ALA 1094ASN 1095 -0.1380
ASN 1095LEU 1096 -0.1743
LEU 1096THR 1097 -0.0154
THR 1097VAL 1098 -0.1681
VAL 1098LYS 1099 -0.0629
LYS 1099LEU 1100 -0.0389
LEU 1100PRO 1101 -0.1068
PRO 1101ASP 1102 0.2761
ASP 1102GLY 1103 -0.0452
GLY 1103TYR 1104 -0.0863
TYR 1104GLU 1105 -0.0905
GLU 1105PHE 1106 -0.0529
PHE 1106LYS 1107 -0.2280
LYS 1107PHE 1108 0.1157
PHE 1108PRO 1109 -0.2136
PRO 1109ASN 1110 -0.2539
ASN 1110ARG 1111 0.2669
ARG 1111LEU 1112 -0.2869
LEU 1112ASN 1113 0.2971
ASN 1113LEU 1114 -0.0412
LEU 1114GLU 1115 0.0539
GLU 1115ALA 1116 -0.0067
ALA 1116ILE 1117 0.1417
ILE 1117ASN 1118 -0.2316
ASN 1118TYR 1119 0.0567
TYR 1119MET 1120 0.0138
MET 1120ALA 1121 -0.0879
ALA 1121ALA 1122 0.0111
ALA 1122ASP 1123 0.0354
ASP 1123GLY 1124 -0.0108
GLY 1124ASP 1125 -0.2426
ASP 1125PHE 1126 0.0166
PHE 1126LYS 1127 -0.0591
LYS 1127ILE 1128 -0.1645
ILE 1128LYS 1129 0.0714
LYS 1129CYS 1130 -0.2000
CYS 1130VAL 1131 0.0269
VAL 1131ALA 1132 -0.2717
ALA 1132PHE 1133 0.0791
PHE 1133ASP 1134 -0.1328

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.