CNRS Nantes University US2B US2B
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***  opt_a_lac  ***

CA strain for 2406061849031399629

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1001SER 1002 -0.0122
SER 1002GLY 1003 0.2472
GLY 1003LEU 1004 0.3420
LEU 1004VAL 1005 -0.1210
VAL 1005ALA 1006 0.1026
ALA 1006SER 1007 -0.0065
SER 1007ASN 1008 -0.0122
ASN 1008LEU 1009 -0.0238
LEU 1009ASN 1010 0.0404
ASN 1010LEU 1011 0.0245
LEU 1011LYS 1012 0.0449
LYS 1012PRO 1013 -0.0372
PRO 1013GLY 1014 0.0631
GLY 1014GLU 1015 0.0641
GLU 1015LEU 1017 0.0795
LEU 1017ARG 1018 0.1254
ARG 1018VAL 1019 -0.0507
VAL 1019ARG 1020 -0.0256
ARG 1020GLY 1021 -0.0333
GLY 1021GLU 1022 -0.0201
GLU 1022VAL 1023 -0.1542
VAL 1023ALA 1024 -0.0938
ALA 1024PRO 1025 0.2927
PRO 1025ASP 1026 -0.0075
ASP 1026ALA 1027 0.0201
ALA 1027LYS 1028 -0.0458
LYS 1028SER 1029 0.0822
SER 1029PHE 1030 -0.2890
PHE 1030VAL 1031 0.0818
VAL 1031LEU 1032 -0.1313
LEU 1032ASN 1033 -0.0748
ASN 1033LEU 1034 -0.1978
LEU 1034GLY 1035 -0.0238
GLY 1035LYS 1036 0.0081
LYS 1036ASP 1037 0.0052
ASP 1037SER 1038 0.0373
SER 1038ASN 1039 -0.2000
ASN 1039ASN 1040 0.0627
ASN 1040LEU 1041 -0.0703
LEU 1041CYS 1042 0.0037
CYS 1042LEU 1043 -0.0676
LEU 1043HIS 1044 -0.1804
HIS 1044PHE 1045 -0.0660
PHE 1045ASN 1046 -0.0986
ASN 1046PRO 1047 -0.0867
PRO 1047ARG 1048 0.0203
ARG 1048PHE 1049 0.0104
PHE 1049ASN 1050 0.2794
ASN 1050ALA 1051 0.0845
ALA 1051HIS 1052 0.0133
HIS 1052GLY 1053 -0.1297
GLY 1053ASP 1054 0.2126
ASP 1054ALA 1055 -0.0626
ALA 1055ASN 1056 0.3784
ASN 1056THR 1057 -0.3241
THR 1057ILE 1058 0.1717
ILE 1058VAL 1059 -0.0708
VAL 1059CYS 1060 -0.0043
CYS 1060ASN 1061 -0.0595
ASN 1061SER 1062 -0.1640
SER 1062LYS 1063 0.0616
LYS 1063ASP 1064 -0.0993
ASP 1064ASP 1065 0.0647
ASP 1065GLY 1066 -0.0934
GLY 1066ALA 1067 -0.0317
ALA 1067TRP 1068 -0.1420
TRP 1068GLY 1069 0.1118
GLY 1069THR 1070 0.0010
THR 1070GLU 1071 -0.0962
GLU 1071GLN 1072 -0.0063
GLN 1072ARG 1073 -0.0260
ARG 1073GLU 1074 0.1025
GLU 1074ALA 1075 -0.0909
ALA 1075VAL 1076 -0.0428
VAL 1076PHE 1077 -0.0485
PHE 1077PRO 1078 0.2525
PRO 1078PHE 1079 -0.0980
PHE 1079GLN 1080 -0.1982
GLN 1080PRO 1081 -0.2059
PRO 1081GLY 1082 0.0695
GLY 1082SER 1083 -0.1949
SER 1083VAL 1084 -0.0726
VAL 1084ALA 1085 0.0964
ALA 1085GLU 1086 -0.1163
GLU 1086VAL 1087 0.0407
VAL 1087CYS 1088 -0.0007
CYS 1088ILE 1089 0.1059
ILE 1089THR 1090 -0.0289
THR 1090PHE 1091 0.1703
PHE 1091ASP 1092 -0.0103
ASP 1092GLN 1093 0.1361
GLN 1093ALA 1094 -0.0346
ALA 1094ASN 1095 0.0062
ASN 1095LEU 1096 -0.0186
LEU 1096THR 1097 0.0425
THR 1097VAL 1098 0.0392
VAL 1098LYS 1099 -0.0300
LYS 1099LEU 1100 0.0395
LEU 1100PRO 1101 0.0079
PRO 1101ASP 1102 0.1520
ASP 1102GLY 1103 0.0085
GLY 1103TYR 1104 0.0283
TYR 1104GLU 1105 0.0162
GLU 1105PHE 1106 -0.0221
PHE 1106LYS 1107 0.0576
LYS 1107PHE 1108 -0.0044
PHE 1108PRO 1109 0.0179
PRO 1109ASN 1110 -0.0156
ASN 1110ARG 1111 0.0214
ARG 1111LEU 1112 -0.0182
LEU 1112ASN 1113 0.0092
ASN 1113LEU 1114 -0.0357
LEU 1114GLU 1115 -0.0401
GLU 1115ALA 1116 -0.0160
ALA 1116ILE 1117 -0.0606
ILE 1117ASN 1118 0.0241
ASN 1118TYR 1119 -0.1250
TYR 1119MET 1120 -0.0354
MET 1120ALA 1121 -0.1457
ALA 1121ALA 1122 -0.0512
ALA 1122ASP 1123 0.0175
ASP 1123GLY 1124 0.1258
GLY 1124ASP 1125 0.2919
ASP 1125PHE 1126 -0.4382
PHE 1126LYS 1127 -0.5300
LYS 1127ILE 1128 0.1085
ILE 1128LYS 1129 -0.2267
LYS 1129CYS 1130 0.2068
CYS 1130VAL 1131 0.0470
VAL 1131ALA 1132 0.1179
ALA 1132PHE 1133 0.1663
PHE 1133ASP 1134 -0.0695

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.