CNRS Nantes University US2B US2B
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CA strain for 2405280836323761248

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
TRP 1CYS 2 0.0132
CYS 2SER 3 0.0490
SER 3THR 4 0.2491
THR 4CYS 5 -0.0653
CYS 5LEU 6 0.2616
LEU 6ASP 7 -0.1053
ASP 7LEU 8 0.1492
LEU 8ALA 9 -0.1797
ALA 9CYS 10 0.2735
CYS 10GLY 11 0.0179
GLY 11ALA 12 0.0318
ALA 12SER 13 -0.3326
SER 13ARG 14 0.4613
ARG 14GLU 15 -0.1037
GLU 15CYS 16 -0.1003
CYS 16TYR 17 0.0111
TYR 17ASP 18 0.0848
ASP 18PRO 19 -0.2885
PRO 19CYS 20 -0.0499
CYS 20PHE 21 0.0319
PHE 21LYS 22 0.1341
LYS 22ALA 23 -0.0959
ALA 23PHE 24 -0.0970
PHE 24GLY 25 0.1290
GLY 25ARG 26 0.1391
ARG 26ALA 27 -0.4792
ALA 27HIS 28 0.4297
HIS 28GLY 29 -0.0658
GLY 29LYS 30 0.1986
LYS 30CYS 31 0.1214
CYS 31MET 32 -0.1554
MET 32ASN 33 0.1406
ASN 33ASN 34 -0.2020
ASN 34LYS 35 0.0108
LYS 35CYS 36 0.1143
CYS 36ARG 37 -0.0591
ARG 37CYS 38 0.1506
CYS 38TYR 39 -0.0302
TYR 39THR 40 0.0751

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.