CNRS Nantes University US2B US2B
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CA strain for 2405280836323761248

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
TRP 1CYS 2 -0.0170
CYS 2SER 3 -0.2343
SER 3THR 4 -0.1370
THR 4CYS 5 -0.0253
CYS 5LEU 6 0.2120
LEU 6ASP 7 0.1803
ASP 7LEU 8 0.0264
LEU 8ALA 9 0.0529
ALA 9CYS 10 -0.2261
CYS 10GLY 11 0.0073
GLY 11ALA 12 0.3724
ALA 12SER 13 -0.5524
SER 13ARG 14 0.3410
ARG 14GLU 15 0.0277
GLU 15CYS 16 -0.1631
CYS 16TYR 17 0.3464
TYR 17ASP 18 -0.0800
ASP 18PRO 19 -0.1731
PRO 19CYS 20 0.1075
CYS 20PHE 21 0.0534
PHE 21LYS 22 -0.1634
LYS 22ALA 23 -0.1952
ALA 23PHE 24 0.4106
PHE 24GLY 25 -0.4684
GLY 25ARG 26 0.0193
ARG 26ALA 27 -0.1269
ALA 27HIS 28 -0.0635
HIS 28GLY 29 -0.2717
GLY 29LYS 30 -0.1695
LYS 30CYS 31 -0.3412
CYS 31MET 32 0.0780
MET 32ASN 33 -0.1481
ASN 33ASN 34 0.2685
ASN 34LYS 35 -0.1136
LYS 35CYS 36 0.1746
CYS 36ARG 37 -0.0038
ARG 37CYS 38 -0.2904
CYS 38TYR 39 0.0339
TYR 39THR 40 -0.3682

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.