CNRS Nantes University US2B US2B
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CA strain for 2405280836323761248

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
TRP 1CYS 2 0.0398
CYS 2SER 3 -0.3903
SER 3THR 4 -0.0450
THR 4CYS 5 -0.4651
CYS 5LEU 6 0.2575
LEU 6ASP 7 -0.1697
ASP 7LEU 8 0.0990
LEU 8ALA 9 -0.0863
ALA 9CYS 10 0.0604
CYS 10GLY 11 -0.0173
GLY 11ALA 12 0.1552
ALA 12SER 13 -0.1354
SER 13ARG 14 0.1961
ARG 14GLU 15 -0.0056
GLU 15CYS 16 -0.1619
CYS 16TYR 17 0.0232
TYR 17ASP 18 0.0504
ASP 18PRO 19 -0.2664
PRO 19CYS 20 -0.0455
CYS 20PHE 21 -0.1063
PHE 21LYS 22 0.1176
LYS 22ALA 23 0.1432
ALA 23PHE 24 -0.0818
PHE 24GLY 25 0.0400
GLY 25ARG 26 0.0051
ARG 26ALA 27 0.6791
ALA 27HIS 28 -0.2692
HIS 28GLY 29 0.5091
GLY 29LYS 30 0.0799
LYS 30CYS 31 0.3772
CYS 31MET 32 -0.3013
MET 32ASN 33 0.1881
ASN 33ASN 34 0.0674
ASN 34LYS 35 -0.1094
LYS 35CYS 36 0.1508
CYS 36ARG 37 0.0094
ARG 37CYS 38 0.0959
CYS 38TYR 39 -0.0607
TYR 39THR 40 0.0649

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.