CNRS Nantes University US2B US2B
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***  Sonic  ***

CA strain for 2405231940243058704

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 39LEU 40 0.0014
LEU 40THR 41 0.0020
THR 41PRO 42 -0.0035
PRO 42LEU 43 0.0006
LEU 43ALA 44 -0.0028
ALA 44TYR 45 -0.0029
TYR 45LYS 46 0.0037
LYS 46GLN 47 -0.0007
GLN 47PHE 48 0.0074
PHE 48ILE 49 0.0005
ILE 49PRO 50 0.0053
PRO 50ASN 51 0.0064
ASN 51VAL 52 0.0052
VAL 52ALA 53 -0.0121
ALA 53GLU 54 -0.0094
GLU 54LYS 55 0.0079
LYS 55THR 56 -0.0002
THR 56LEU 57 0.0366
LEU 57GLY 58 0.0178
GLY 58ALA 59 -0.0050
ALA 59SER 60 -0.0033
SER 60GLY 61 0.0019
GLY 61ARG 62 -0.0056
ARG 62TYR 63 0.0122
TYR 63GLU 64 -0.0025
GLU 64GLY 65 0.0232
GLY 65LYS 66 0.0038
LYS 66ILE 67 -0.0001
ILE 67THR 68 -0.0009
THR 68ARG 69 0.0006
ARG 69ASN 70 0.0010
ASN 70SER 71 -0.0017
SER 71GLU 72 -0.0003
GLU 72ARG 73 -0.0038
ARG 73PHE 74 -0.0064
PHE 74LYS 75 0.0014
LYS 75GLU 76 0.0019
GLU 76LEU 77 -0.0063
LEU 77THR 78 0.0045
THR 78PRO 79 -0.0047
PRO 79ASN 80 0.0058
ASN 80TYR 81 -0.0010
TYR 81ASN 82 0.0069
ASN 82PRO 83 -0.0041
PRO 83ASP 84 0.0057
ASP 84ILE 85 0.0041
ILE 85ILE 86 -0.0078
ILE 86PHE 87 0.0059
PHE 87LYS 88 -0.0054
LYS 88ASP 89 0.0009
ASP 89GLU 90 -0.0005
GLU 90GLU 91 0.0012
GLU 91ASN 92 0.0051
ASN 92THR 93 -0.0015
THR 93GLY 94 0.0014
GLY 94ALA 95 0.0031
ALA 95ASP 96 0.0014
ASP 96ARG 97 -0.0013
ARG 97LEU 98 0.0010
LEU 98MET 99 -0.0067
MET 99THR 100 -0.0236
THR 100GLN 101 0.0127
GLN 101ARG 102 0.0198
ARG 102CYS 103 -0.0260
CYS 103LYS 104 -0.0000
LYS 104ASP 105 0.0073
ASP 105LYS 106 0.0074
LYS 106LEU 107 -0.0157
LEU 107ASN 108 0.0029
ASN 108ALA 109 0.0066
ALA 109LEU 110 -0.0009
LEU 110ALA 111 0.0035
ALA 111ILE 112 0.0020
ILE 112SER 113 0.0054
SER 113VAL 114 0.0003
VAL 114MET 115 0.0017
MET 115ASN 116 0.0052
ASN 116GLN 117 0.0010
GLN 117TRP 118 0.0008
TRP 118PRO 119 0.0022
PRO 119GLY 120 0.0020
GLY 120VAL 121 0.0007
VAL 121LYS 122 0.0008
LYS 122LEU 123 -0.0035
LEU 123ARG 124 0.0003
ARG 124VAL 125 0.0019
VAL 125THR 126 -0.0024
THR 126GLU 127 0.0046
GLU 127GLY 128 -0.0023
GLY 128TRP 129 -0.0010
TRP 129ASP 130 -0.0006
ASP 130GLU 131 -0.0023
GLU 131ASP 132 -0.0001
ASP 132GLY 133 0.0034
GLY 133HIS 134 -0.0000
HIS 134HIS 135 0.0042
HIS 135SER 136 0.0046
SER 136GLU 137 -0.0007
GLU 137GLU 138 0.0043
GLU 138SER 139 0.0006
SER 139LEU 140 0.0001
LEU 140HIS 141 0.0075
HIS 141TYR 142 -0.0014
TYR 142GLU 143 -0.0008
GLU 143GLY 144 0.0009
GLY 144ARG 145 0.0018
ARG 145ALA 146 -0.0039
ALA 146VAL 147 0.0015
VAL 147ASP 148 -0.0042
ASP 148ILE 149 0.0016
ILE 149THR 150 0.0005
THR 150THR 151 0.0022
THR 151SER 152 0.0012
SER 152ASP 153 -0.0021
ASP 153ARG 154 -0.0000
ARG 154ASP 155 -0.0011
ASP 155ARG 156 0.0018
ARG 156SER 157 -0.0006
SER 157LYS 158 -0.0009
LYS 158TYR 159 0.0018
TYR 159GLY 160 -0.0003
GLY 160MET 161 0.0014
MET 161LEU 162 0.0017
LEU 162ALA 163 0.0025
ALA 163ARG 164 -0.0009
ARG 164LEU 165 0.0034
LEU 165ALA 166 -0.0013
ALA 166VAL 167 0.0014
VAL 167GLU 168 -0.0012
GLU 168ALA 169 0.0075
ALA 169GLY 170 -0.0108
GLY 170PHE 171 0.0017
PHE 171ASP 172 -0.0010
ASP 172TRP 173 -0.0010
TRP 173VAL 174 0.0088
VAL 174TYR 175 0.0016
TYR 175TYR 176 0.0071
TYR 176GLU 177 -0.0048
GLU 177SER 178 0.0041
SER 178LYS 179 0.0021
LYS 179ALA 180 -0.0026
ALA 180HIS 181 0.0016
HIS 181ILE 182 0.0002
ILE 182HIS 183 0.0064
HIS 183CYS 184 -0.0040
CYS 184SER 185 0.0030
SER 185VAL 186 -0.0043
VAL 186LYS 187 0.0037
LYS 187ALA 188 -0.0115
ALA 188GLU 189 -0.0018
GLU 189ASN 190 -0.1126
ASN 190SER 191 0.0584
SER 191VAL 192 0.0141
VAL 192ALA 193 -0.3990
ALA 193ALA 194 0.1180
ALA 194LYS 195 0.0489

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.