CNRS Nantes University US2B US2B
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***  UBIQUITIN  ***

CA strain for 2405231012312834919

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1GLN 2 0.0190
GLN 2ILE 3 0.0121
ILE 3PHE 4 0.0003
PHE 4VAL 5 -0.0404
VAL 5LYS 6 0.0232
LYS 6THR 7 -0.0650
THR 7LEU 8 0.0709
LEU 8THR 9 -0.0554
THR 9GLY 10 -0.0366
GLY 10LYS 11 0.1246
LYS 11THR 12 0.0204
THR 12ILE 13 0.0342
ILE 13THR 14 -0.0247
THR 14LEU 15 0.0308
LEU 15GLU 16 -0.0238
GLU 16VAL 17 0.0243
VAL 17GLU 18 0.0117
GLU 18PRO 19 -0.0221
PRO 19SER 20 0.0138
SER 20ASP 21 -0.0400
ASP 21THR 22 0.0676
THR 22ILE 23 0.0370
ILE 23GLU 24 -0.0488
GLU 24ASN 25 0.0289
ASN 25VAL 26 0.0286
VAL 26LYS 27 -0.0287
LYS 27ALA 28 0.1108
ALA 28LYS 29 -0.0346
LYS 29ILE 30 -0.1071
ILE 30GLN 31 0.0429
GLN 31ASP 32 -0.0427
ASP 32LYS 33 0.0250
LYS 33GLU 34 -0.0327
GLU 34GLY 35 0.1251
GLY 35ILE 36 -0.0885
ILE 36PRO 37 0.1596
PRO 37PRO 38 -0.1224
PRO 38ASP 39 0.2013
ASP 39GLN 40 -0.1830
GLN 40GLN 41 -0.1366
GLN 41ARG 42 -0.0129
ARG 42LEU 43 0.3542
LEU 43ILE 44 -0.0198
ILE 44PHE 45 0.1214
PHE 45ALA 46 -0.0143
ALA 46GLY 47 -0.0150
GLY 47LYS 48 -0.0659
LYS 48GLN 49 0.1283
GLN 49LEU 50 -0.0021
LEU 50GLU 51 -0.0771
GLU 51ASP 52 -0.0835
ASP 52GLY 53 0.1133
GLY 53ARG 54 0.0007
ARG 54THR 55 0.0240
THR 55LEU 56 0.0082
LEU 56SER 57 -0.0095
SER 57ASP 58 0.0049
ASP 58TYR 59 0.0009
TYR 59ASN 60 0.0837
ASN 60ILE 61 -0.0165
ILE 61GLN 62 0.0333
GLN 62LYS 63 0.0157
LYS 63GLU 64 -0.0164
GLU 64SER 65 0.0273
SER 65THR 66 -0.0187
THR 66LEU 67 0.0066
LEU 67HIS 68 -0.0018
HIS 68LEU 69 0.0376
LEU 69VAL 70 -0.1473
VAL 70LEU 71 0.2670
LEU 71ARG 72 -0.7210
ARG 72LEU 73 0.3328
LEU 73ARG 74 0.2870
ARG 74GLY 75 -0.0166
GLY 75GLY 76 -0.1879

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.