CNRS Nantes University US2B US2B
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***  UBIQUITIN  ***

CA strain for 2405231012312834919

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1GLN 2 -0.0223
GLN 2ILE 3 -0.0075
ILE 3PHE 4 -0.0255
PHE 4VAL 5 -0.0465
VAL 5LYS 6 0.0118
LYS 6THR 7 -0.0756
THR 7LEU 8 0.0219
LEU 8THR 9 -0.0025
THR 9GLY 10 -0.0354
GLY 10LYS 11 0.0246
LYS 11THR 12 -0.0058
THR 12ILE 13 0.0134
ILE 13THR 14 -0.0298
THR 14LEU 15 -0.0019
LEU 15GLU 16 -0.0184
GLU 16VAL 17 -0.0078
VAL 17GLU 18 -0.0234
GLU 18PRO 19 -0.0060
PRO 19SER 20 0.0007
SER 20ASP 21 0.0129
ASP 21THR 22 0.0172
THR 22ILE 23 0.0048
ILE 23GLU 24 -0.0009
GLU 24ASN 25 0.0208
ASN 25VAL 26 -0.0063
VAL 26LYS 27 0.1002
LYS 27ALA 28 -0.0249
ALA 28LYS 29 0.0749
LYS 29ILE 30 -0.0368
ILE 30GLN 31 0.0179
GLN 31ASP 32 0.0144
ASP 32LYS 33 0.0291
LYS 33GLU 34 -0.0123
GLU 34GLY 35 0.0364
GLY 35ILE 36 0.0092
ILE 36PRO 37 -0.0212
PRO 37PRO 38 0.0053
PRO 38ASP 39 0.1507
ASP 39GLN 40 -0.0377
GLN 40GLN 41 0.1845
GLN 41ARG 42 -0.0261
ARG 42LEU 43 0.1270
LEU 43ILE 44 0.0131
ILE 44PHE 45 -0.0462
PHE 45ALA 46 0.0022
ALA 46GLY 47 0.0066
GLY 47LYS 48 -0.0136
LYS 48GLN 49 0.0186
GLN 49LEU 50 -0.0093
LEU 50GLU 51 -0.0064
GLU 51ASP 52 -0.0382
ASP 52GLY 53 0.0916
GLY 53ARG 54 0.0071
ARG 54THR 55 0.0041
THR 55LEU 56 0.0022
LEU 56SER 57 0.0041
SER 57ASP 58 -0.0032
ASP 58TYR 59 -0.0064
TYR 59ASN 60 0.0222
ASN 60ILE 61 -0.0046
ILE 61GLN 62 0.0084
GLN 62LYS 63 0.0101
LYS 63GLU 64 -0.0171
GLU 64SER 65 0.0105
SER 65THR 66 -0.0559
THR 66LEU 67 -0.0079
LEU 67HIS 68 -0.0753
HIS 68LEU 69 -0.0856
LEU 69VAL 70 -0.1004
VAL 70LEU 71 -0.3495
LEU 71ARG 72 -0.1418
ARG 72LEU 73 0.0073
LEU 73ARG 74 -0.0482
ARG 74GLY 75 0.0429
GLY 75GLY 76 -0.0614

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.