CNRS Nantes University US2B US2B
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***  UBIQUITIN  ***

CA strain for 2405231012312834919

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1GLN 2 0.1634
GLN 2ILE 3 0.0646
ILE 3PHE 4 0.0585
PHE 4VAL 5 -0.0793
VAL 5LYS 6 0.0871
LYS 6THR 7 0.0041
THR 7LEU 8 0.1738
LEU 8THR 9 -0.1352
THR 9GLY 10 -0.1096
GLY 10LYS 11 0.1490
LYS 11THR 12 0.2501
THR 12ILE 13 0.0059
ILE 13THR 14 0.2912
THR 14LEU 15 0.2975
LEU 15GLU 16 0.1544
GLU 16VAL 17 0.1103
VAL 17GLU 18 0.2544
GLU 18PRO 19 -0.0077
PRO 19SER 20 -0.0237
SER 20ASP 21 0.0339
ASP 21THR 22 -0.0817
THR 22ILE 23 -0.1297
ILE 23GLU 24 0.0052
GLU 24ASN 25 -0.1176
ASN 25VAL 26 0.0288
VAL 26LYS 27 -0.1959
LYS 27ALA 28 -0.0090
ALA 28LYS 29 -0.2350
LYS 29ILE 30 0.1083
ILE 30GLN 31 -0.0578
GLN 31ASP 32 0.0008
ASP 32LYS 33 -0.0161
LYS 33GLU 34 -0.0169
GLU 34GLY 35 0.1378
GLY 35ILE 36 0.2207
ILE 36PRO 37 -0.1068
PRO 37PRO 38 0.0471
PRO 38ASP 39 -0.1709
ASP 39GLN 40 0.2041
GLN 40GLN 41 -0.0295
GLN 41ARG 42 0.0688
ARG 42LEU 43 -0.2289
LEU 43ILE 44 0.0632
ILE 44PHE 45 -0.0383
PHE 45ALA 46 -0.0114
ALA 46GLY 47 0.1392
GLY 47LYS 48 -0.2092
LYS 48GLN 49 0.0508
GLN 49LEU 50 0.0480
LEU 50GLU 51 -0.1630
GLU 51ASP 52 0.0370
ASP 52GLY 53 0.0508
GLY 53ARG 54 0.0894
ARG 54THR 55 -0.0073
THR 55LEU 56 0.0036
LEU 56SER 57 -0.0134
SER 57ASP 58 0.0802
ASP 58TYR 59 -0.2499
TYR 59ASN 60 0.3657
ASN 60ILE 61 -0.0693
ILE 61GLN 62 0.0841
GLN 62LYS 63 0.1183
LYS 63GLU 64 -0.0433
GLU 64SER 65 0.2042
SER 65THR 66 -0.3921
THR 66LEU 67 0.0854
LEU 67HIS 68 -0.3036
HIS 68LEU 69 0.3876
LEU 69VAL 70 -0.2037
VAL 70LEU 71 0.0396
LEU 71ARG 72 0.0666
ARG 72LEU 73 -0.2606
LEU 73ARG 74 -0.4380
ARG 74GLY 75 0.1220
GLY 75GLY 76 0.2376

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.