CNRS Nantes University US2B US2B
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***  SUGAR BINDING PROTEIN 10-SEP-10 2XR5  ***

CA strain for 240511163828700048

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
HIS 254PRO 255 -0.0268
PRO 255CYS 256 0.0120
CYS 256PRO 257 -0.0151
PRO 257TRP 258 0.1006
TRP 258TRP 258 0.0061
TRP 258GLU 259 -0.0661
GLU 259GLU 259 -0.0060
GLU 259TRP 260 -0.1153
TRP 260THR 261 -0.1326
THR 261PHE 262 -0.0034
PHE 262PHE 263 -0.1094
PHE 263GLN 264 -0.0132
GLN 264GLY 265 0.0210
GLY 265ASN 266 -0.0097
ASN 266CYS 267 0.0123
CYS 267CYS 267 0.0027
CYS 267TYR 268 0.0027
TYR 268PHE 269 0.0304
PHE 269MET 270 0.0007
MET 270MET 270 0.0000
MET 270SER 271 0.0292
SER 271ASN 272 0.0020
ASN 272ASN 272 -0.0000
ASN 272SER 273 0.0050
SER 273GLN 274 0.0067
GLN 274ARG 275 -0.0099
ARG 275ASN 276 -0.0064
ASN 276TRP 277 -0.0248
TRP 277HIS 278 0.0017
HIS 278ASP 279 0.0003
ASP 279SER 280 0.0011
SER 280ILE 281 -0.0100
ILE 281THR 282 -0.0331
THR 282ALA 283 0.0291
ALA 283CYS 284 -0.0126
CYS 284LYS 285 0.0076
LYS 285GLU 286 -0.0248
GLU 286GLU 286 0.0009
GLU 286VAL 287 0.0637
VAL 287GLY 288 0.0154
GLY 288ALA 289 0.0051
ALA 289GLN 290 0.0842
GLN 290LEU 291 0.0323
LEU 291VAL 292 -0.0342
VAL 292VAL 293 0.0075
VAL 293ILE 294 -0.0149
ILE 294ILE 294 -0.0000
ILE 294LYS 295 0.0072
LYS 295SER 296 0.0187
SER 296ALA 297 -0.0034
ALA 297GLU 298 -0.0462
GLU 298GLU 298 -0.0002
GLU 298GLU 299 0.0236
GLU 299GLN 300 -0.0250
GLN 300ASN 301 0.0193
ASN 301PHE 302 -0.0751
PHE 302LEU 303 0.0167
LEU 303GLN 304 0.0145
GLN 304LEU 305 -0.0017
LEU 305GLN 306 -0.0309
GLN 306SER 307 0.0060
SER 307SER 307 -0.1752
SER 307SER 308 -0.0136
SER 308SER 308 0.0044
SER 308ARG 309 0.0335
ARG 309SER 310 -0.0341
SER 310SER 310 -0.0000
SER 310ASN 311 -0.0028
ASN 311ASN 311 0.0046
ASN 311ARG 312 -0.0033
ARG 312ARG 312 -0.0092
ARG 312PHE 313 -0.0391
PHE 313THR 314 -0.0066
THR 314TRP 315 -0.0278
TRP 315MET 316 -0.0137
MET 316GLY 317 0.0038
GLY 317LEU 318 0.0086
LEU 318SER 319 0.0297
SER 319SER 319 0.0047
SER 319ASP 320 0.0260
ASP 320LEU 321 -0.0274
LEU 321ASN 322 0.0083
ASN 322ASN 322 0.0231
ASN 322GLN 323 -0.0090
GLN 323GLU 324 0.0003
GLU 324GLY 325 -0.0055
GLY 325THR 326 0.0179
THR 326TRP 327 0.0061
TRP 327GLN 328 -0.0355
GLN 328GLN 328 0.0024
GLN 328TRP 329 0.0260
TRP 329VAL 330 -0.0168
VAL 330ASP 331 -0.0367
ASP 331GLY 332 0.0179
GLY 332SER 333 -0.0040
SER 333SER 333 0.0044
SER 333PRO 334 0.0003
PRO 334LEU 335 -0.0424
LEU 335LEU 336 0.0151
LEU 336PRO 337 -0.0001
PRO 337SER 338 -0.0047
SER 338PHE 339 0.0099
PHE 339PHE 339 0.0079
PHE 339LYS 340 -0.0285
LYS 340GLN 341 0.0185
GLN 341GLN 341 0.0176
GLN 341TYR 342 -0.0377
TYR 342TRP 343 -0.1325
TRP 343ASN 344 0.0123
ASN 344ARG 345 0.0621
ARG 345GLY 346 -0.0070
GLY 346GLU 347 0.0400
GLU 347PRO 348 -0.4600
PRO 348ASN 349 0.0712
ASN 349ASN 350 -0.0697
ASN 350VAL 351 0.0149
VAL 351VAL 351 0.0209
VAL 351GLY 352 0.0043
GLY 352GLU 353 0.0394
GLU 353GLU 354 -0.0041
GLU 354ASP 355 0.0373
ASP 355CYS 356 0.0053
CYS 356ALA 357 -0.0019
ALA 357GLU 358 -0.0172
GLU 358PHE 359 -0.0382
PHE 359SER 360 0.0291
SER 360GLY 361 -0.0809
GLY 361ASN 362 0.0002
ASN 362GLY 363 0.0110
GLY 363TRP 364 -0.0261
TRP 364ASN 365 -0.0480
ASN 365ASP 366 0.0171
ASP 366ASP 367 0.0065
ASP 367LYS 368 0.0198
LYS 368CYS 369 0.0334
CYS 369CYS 369 -0.0066
CYS 369CYS 369 0.0011
CYS 369ASN 370 -0.0177
ASN 370LEU 371 0.0027
LEU 371LEU 371 -0.0158
LEU 371ALA 372 -0.0156
ALA 372LYS 373 0.0133
LYS 373PHE 374 -0.0466
PHE 374TRP 375 -0.0035
TRP 375ILE 376 0.0006
ILE 376CYS 377 0.0120
CYS 377CYS 377 0.0010
CYS 377LYS 378 -0.0128
LYS 378LYS 379 0.0261
LYS 379SER 380 0.0008
SER 380SER 380 -0.0196
SER 380ALA 381 -0.0106
ALA 381ALA 382 -0.0011
ALA 382SER 383 -0.0293
SER 383CYS 384 0.0359

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.