CNRS Nantes University US2B US2B
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***  ELECTRON TRANSPORT 31-MAR-94 1FDN  ***

CA strain for 24050717254633091

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1TYR 2 0.0228
TYR 2VAL 3 0.1326
VAL 3ILE 4 -0.0553
ILE 4ASN 5 0.0976
ASN 5GLU 6 0.0922
GLU 6ALA 7 -0.1819
ALA 7CYS 8 0.0228
CYS 8ILE 9 0.0670
ILE 9SER 10 0.0398
SER 10CYS 11 -0.1163
CYS 11GLY 12 -0.0198
GLY 12ALA 13 0.0517
ALA 13CYS 14 -0.0222
CYS 14GLU 15 0.0269
GLU 15PRO 16 0.0541
PRO 16GLU 17 0.0552
GLU 17CYS 18 -0.0995
CYS 18PRO 19 -0.0061
PRO 19VAL 20 -0.1425
VAL 20ASN 21 0.1165
ASN 21ALA 22 0.0046
ALA 22ILE 23 -0.0076
ILE 23SER 24 0.0819
SER 24SER 25 0.1089
SER 25GLY 26 0.1789
GLY 26ASP 27 0.2536
ASP 27ASP 28 -0.0825
ASP 28ARG 29 0.0504
ARG 29TYR 30 -0.0206
TYR 30VAL 31 0.1507
VAL 31ILE 32 0.1179
ILE 32ASP 33 0.2223
ASP 33ALA 34 -0.1223
ALA 34ASP 35 0.2492
ASP 35THR 36 -0.3430
THR 36CYS 37 -0.0364
CYS 37ILE 38 0.0760
ILE 38ASP 39 0.0010
ASP 39CYS 40 0.0604
CYS 40GLY 41 -0.0900
GLY 41ALA 42 0.2067
ALA 42CYS 43 -0.0276
CYS 43ALA 44 -0.0381
ALA 44GLY 45 0.0925
GLY 45VAL 46 0.0256
VAL 46CYS 47 -0.1036
CYS 47PRO 48 -0.0481
PRO 48VAL 49 -0.0547
VAL 49ASP 50 0.0226
ASP 50ALA 51 0.0077
ALA 51PRO 52 -0.0401
PRO 52VAL 53 0.0492
VAL 53GLN 54 -0.0344
GLN 54ALA 55 0.0634

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.