CNRS Nantes University US2B US2B
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***  ELECTRON TRANSPORT 31-MAR-94 1FDN  ***

CA strain for 24050717254633091

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1TYR 2 0.0124
TYR 2VAL 3 -0.0203
VAL 3ILE 4 -0.0131
ILE 4ASN 5 0.0285
ASN 5GLU 6 0.0224
GLU 6ALA 7 -0.0198
ALA 7CYS 8 0.0021
CYS 8ILE 9 -0.0217
ILE 9SER 10 0.0144
SER 10CYS 11 0.0782
CYS 11GLY 12 -0.0246
GLY 12ALA 13 0.0426
ALA 13CYS 14 -0.0157
CYS 14GLU 15 0.0044
GLU 15PRO 16 0.0139
PRO 16GLU 17 0.0026
GLU 17CYS 18 -0.0114
CYS 18PRO 19 0.0050
PRO 19VAL 20 0.0032
VAL 20ASN 21 0.0045
ASN 21ALA 22 0.0016
ALA 22ILE 23 -0.0069
ILE 23SER 24 0.0038
SER 24SER 25 0.0268
SER 25GLY 26 -0.0325
GLY 26ASP 27 -0.0098
ASP 27ASP 28 0.2332
ASP 28ARG 29 0.0873
ARG 29TYR 30 0.0173
TYR 30VAL 31 -0.0164
VAL 31ILE 32 -0.1355
ILE 32ASP 33 0.0118
ASP 33ALA 34 -0.0122
ALA 34ASP 35 0.0134
ASP 35THR 36 0.0239
THR 36CYS 37 0.0188
CYS 37ILE 38 -0.0298
ILE 38ASP 39 0.0042
ASP 39CYS 40 0.0054
CYS 40GLY 41 0.0070
GLY 41ALA 42 0.0143
ALA 42CYS 43 -0.0105
CYS 43ALA 44 0.0012
ALA 44GLY 45 -0.0058
GLY 45VAL 46 0.0199
VAL 46CYS 47 -0.0192
CYS 47PRO 48 0.0002
PRO 48VAL 49 -0.0185
VAL 49ASP 50 0.0239
ASP 50ALA 51 -0.0098
ALA 51PRO 52 0.0146
PRO 52VAL 53 -0.0008
VAL 53GLN 54 0.0164
GLN 54ALA 55 0.0080

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.