CNRS Nantes University US2B US2B
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***  ELECTRON TRANSPORT 31-MAR-94 1FDN  ***

CA strain for 24050717233232136

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1TYR 2 0.0632
TYR 2VAL 3 -0.1097
VAL 3ILE 4 -0.0870
ILE 4ASN 5 0.0512
ASN 5GLU 6 -0.0970
GLU 6ALA 7 -0.0034
ALA 7CYS 8 -0.0045
CYS 8ILE 9 -0.0315
ILE 9SER 10 -0.0162
SER 10CYS 11 0.1139
CYS 11GLY 12 -0.0584
GLY 12ALA 13 0.0573
ALA 13CYS 14 0.0082
CYS 14GLU 15 -0.0363
GLU 15PRO 16 0.0328
PRO 16GLU 17 -0.0153
GLU 17CYS 18 -0.0206
CYS 18PRO 19 0.0467
PRO 19VAL 20 -0.0034
VAL 20ASN 21 0.0151
ASN 21ALA 22 0.0236
ALA 22ILE 23 -0.0656
ILE 23SER 24 0.0245
SER 24SER 25 -0.0570
SER 25GLY 26 0.0258
GLY 26ASP 27 -0.0177
ASP 27ASP 28 -0.1919
ASP 28ARG 29 -0.0228
ARG 29TYR 30 0.0377
TYR 30VAL 31 -0.1259
VAL 31ILE 32 -0.1457
ILE 32ASP 33 -0.0158
ASP 33ALA 34 -0.0101
ALA 34ASP 35 0.0994
ASP 35THR 36 0.1073
THR 36CYS 37 0.0194
CYS 37ILE 38 -0.0446
ILE 38ASP 39 -0.0079
ASP 39CYS 40 0.0316
CYS 40GLY 41 0.0442
GLY 41ALA 42 0.0582
ALA 42CYS 43 -0.0198
CYS 43ALA 44 -0.0303
ALA 44GLY 45 0.0015
GLY 45VAL 46 0.0269
VAL 46CYS 47 -0.0619
CYS 47PRO 48 0.0206
PRO 48VAL 49 -0.0538
VAL 49ASP 50 0.0578
ASP 50ALA 51 -0.0279
ALA 51PRO 52 0.0238
PRO 52VAL 53 -0.0185
VAL 53GLN 54 0.0265
GLN 54ALA 55 0.0060

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.